FFCP PHASE1:Hg19::chr1:55446323..55446350,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:55446323..55446350,+ to FFCP PHASE1:Hg19::chr1:55446323..55446350,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199964 | |EntrezGene=199964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27296 | |HGNC=27296 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0U2 | |UniProt=Q8N0U2 | ||
|association_with_transcript=-114bp_to_ENST00000371268,NM_182532,uc001cyd.2_5end | |||
|cluster_id=chr1:55446323..55446350,+ | |||
|description=CAGE_peak_2_at_TMEM61_5end | |||
|id=chr1:55446323..55446350,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.58e-10!254;CL:0002076!2.88e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.36e-07;1!CL:0000164;2.36e-07;1!CL:0000502;2.36e-07;1!CL:0000172;2.36e-07;1!CL:0000173;2.36e-07;1!CL:0002553;9.77e-07;1!CL:0000313;9.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.36e-07,1;CL:0000164,2.36e-07,1;CL:0000502,2.36e-07,1;CL:0000172,2.36e-07,1;CL:0000173,2.36e-07,1;CL:0002351,2.36e-07,1;CL:0000313,6.02e-07,1;CL:0002553,7.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.18e-17;3!CL:0002351;2.36e-07;1!UBERON:0008801;2.50e-07;1!UBERON:0006298;3.36e-07;1!UBERON:0000358;3.78e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.32e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.36e-07;1!DOID:3111;4.91e-07;1!DOID:3603;4.91e-07;1!DOID:2152;9.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.36e-07,1;DOID:3111,5.06e-07,1;DOID:3603,5.06e-07,1;DOID:2152,6.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-22!115;UBERON:0004119!5.83e-19!169;UBERON:0000925!5.83e-19!169;UBERON:0006595!5.83e-19!169;UBERON:0001007!2.62e-15!155;UBERON:0001555!2.62e-15!155;UBERON:0007026!2.62e-15!155;UBERON:0001004!3.07e-13!72;UBERON:0004921!1.79e-12!129;UBERON:0004185!1.79e-12!129;UBERON:0000065!3.72e-11!53;UBERON:0005153!4.11e-11!37;UBERON:0000077!9.66e-11!130;UBERON:0005911!1.01e-10!82;UBERON:0000481!1.17e-10!347;UBERON:0000464!5.19e-09!104;UBERON:0000153!2.21e-08!129;UBERON:0007811!2.21e-08!129;UBERON:0000062!3.31e-08!511;UBERON:0008947!3.40e-08!38;UBERON:0003258!3.40e-08!38;UBERON:0005178!5.99e-08!34;UBERON:0002224!5.99e-08!34;UBERON:0000477!8.15e-08!286;UBERON:0000064!8.81e-08!219;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001041!1.07e-07!98;UBERON:0005181!1.37e-07!35;UBERON:0000922!1.49e-07!612;UBERON:0000161!2.35e-07!35;UBERON:0002616!2.73e-07!59;UBERON:0000466!2.94e-07!126;UBERON:0005157!3.24e-07!51;UBERON:0004111!3.28e-07!241;UBERON:0000033!3.78e-07!123;UBERON:0004733!5.52e-07!12;UBERON:0002028!5.52e-07!12;UBERON:0007277!5.52e-07!12;UBERON:0002048!7.57e-07!22;UBERON:0000117!7.57e-07!22;UBERON:0000171!7.57e-07!22;UBERON:0000170!7.57e-07!22;UBERON:0005597!7.57e-07!22;UBERON:0000118!7.57e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;1.76e-15;9!UBERON:0001895;1.76e-15;9!UBERON:0003296;1.53e-13;4!UBERON:0010133;1.53e-13;4!UBERON:0000007;7.43e-13;2!UBERON:0001829;7.43e-13;2!UBERON:0004733;1.48e-11;12!UBERON:0002028;1.48e-11;12!UBERON:0004732;1.19e-10;13!UBERON:0001044;1.84e-09;6!UBERON:0003293;1.84e-09;6!UBERON:0003294;1.84e-09;6!UBERON:0010047;1.84e-09;6!UBERON:0003408;1.84e-09;6!UBERON:0000167;1.84e-09;6!UBERON:0002037;4.45e-09;6!UBERON:0000988;2.33e-08;3!UBERON:0006947;3.62e-08;3!UBERON:0004054;3.62e-08;3!UBERON:0001894;6.18e-08;7!UBERON:0001831;2.50e-07;1!UBERON:0001567;2.50e-07;1!UBERON:0001736;3.36e-07;1!UBERON:0001000;9.77e-07;1!UBERON:0001301;9.77e-07;1!UBERON:0004911;9.77e-07;1!UBERON:0005352;9.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.85e-15,9;UBERON:0001895,1.85e-15,9;UBERON:0010092,1.85e-15,9;UBERON:0003296,2.19e-13,4;UBERON:0010133,2.19e-13,4;UBERON:0000007,7.44e-13,2;UBERON:0001829,7.44e-13,2;UBERON:0004733,1.53e-11,12;UBERON:0002028,1.53e-11,12;UBERON:0007277,1.53e-11,12;UBERON:0004732,1.23e-10,13;UBERON:0007023,1.30e-10,114;UBERON:0001044,1.85e-09,6;UBERON:0003293,1.85e-09,6;UBERON:0003294,1.85e-09,6;UBERON:0010047,1.85e-09,6;UBERON:0000167,1.85e-09,6;UBERON:0003076,3.48e-09,15;UBERON:0003057,3.48e-09,15;UBERON:0002037,4.52e-09,6;UBERON:0006215,4.52e-09,6;UBERON:0000988,2.42e-08,3;UBERON:0006947,3.50e-08,3;UBERON:0004054,3.50e-08,3;UBERON:0001894,7.56e-08,7;UBERON:0006222,7.56e-08,7;UBERON:0001831,2.50e-07,1;UBERON:0001567,2.50e-07,1;UBERON:0008801,2.50e-07,1;UBERON:0001736,3.36e-07,1;UBERON:0006298,3.36e-07,1;UBERON:0004911,6.02e-07,1;UBERON:0001000,8.02e-07,1;UBERON:0005352,8.02e-07,1 | |||
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| ||
|short_description=p2@TMEM61 | |||
}} | }} |
Latest revision as of 15:22, 18 September 2015
Short description: | p2@TMEM61 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM61_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENST00000371268, NM_182532, uc001cyd.2_5end |
EntrezGene: | TMEM61 |
HGNC: | 27296 |
UniProt: | Q8N0U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.36e-07 | 1 |
enteroendocrine cell | 2.36e-07 | 1 |
type D enteroendocrine cell | 2.36e-07 | 1 |
somatostatin secreting cell | 2.36e-07 | 1 |
pancreatic D cell | 2.36e-07 | 1 |
progenitor cell of endocrine pancreas | 2.36e-07 | 1 |
serous secreting cell | 6.02e-07 | 1 |
lung fibroblast | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.85e-15 | 9 |
metencephalon | 1.85e-15 | 9 |
future metencephalon | 1.85e-15 | 9 |
gland of diencephalon | 2.19e-13 | 4 |
neuroendocrine gland | 2.19e-13 | 4 |
pituitary gland | 7.44e-13 | 2 |
major salivary gland | 7.44e-13 | 2 |
segmental subdivision of hindbrain | 1.53e-11 | 12 |
hindbrain | 1.53e-11 | 12 |
presumptive hindbrain | 1.53e-11 | 12 |
segmental subdivision of nervous system | 1.23e-10 | 13 |
adult organism | 1.30e-10 | 114 |
saliva-secreting gland | 1.85e-09 | 6 |
gland of oral region | 1.85e-09 | 6 |
gland of foregut | 1.85e-09 | 6 |
oral gland | 1.85e-09 | 6 |
oral cavity | 1.85e-09 | 6 |
posterior neural tube | 3.48e-09 | 15 |
chordal neural plate | 3.48e-09 | 15 |
cerebellum | 4.52e-09 | 6 |
rhombic lip | 4.52e-09 | 6 |
pons | 2.42e-08 | 3 |
male genital duct | 3.50e-08 | 3 |
internal male genitalia | 3.50e-08 | 3 |
diencephalon | 7.56e-08 | 7 |
future diencephalon | 7.56e-08 | 7 |
parotid gland | 2.50e-07 | 1 |
cheek | 2.50e-07 | 1 |
parotid gland primordium | 2.50e-07 | 1 |
submandibular gland | 3.36e-07 | 1 |
submandibular gland primordium | 3.36e-07 | 1 |
epithelium of female gonad | 6.02e-07 | 1 |
vas deferens | 8.02e-07 | 1 |
spermatic cord | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.36e-07 | 1 |
cystadenocarcinoma | 5.06e-07 | 1 |
mucinous cystadenocarcinoma | 5.06e-07 | 1 |
ovary epithelial cancer | 6.02e-07 | 1 |