FFCP PHASE1:Hg19::chr1:43205891..43205930,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:43205891..43205930,- to FFCP PHASE1:Hg19::chr1:43205891..43205930,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149461 | |EntrezGene=149461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2040 | |HGNC=2040 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6F1,F5H5P9,B7Z5I2 | |UniProt=Q8N6F1,F5H5P9,B7Z5I2 | ||
|association_with_transcript=0bp_to_ENST00000296387,ENST00000539749,NM_001123395,NM_001185117,NM_148960,uc001cht.1,uc001chu.2,uc010ojv.1_5end | |||
|cluster_id=chr1:43205891..43205930,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_CLDN19_5end | |||
|id=chr1:43205891..43205930,- | |||
|ontology_enrichment_celltype=CL:0002322!6.62e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.91e-12;5!CL:0002541;1.50e-08;3!CL:0002586;5.62e-08;3!CL:1000507;9.19e-07;10!CL:1000494;9.19e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.32e-12,5;CL:0002541,1.50e-08,3;CL:0002586,5.07e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.36e-08;3!UBERON:0003057;4.36e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-14!115;UBERON:0003075!5.87e-12!86;UBERON:0007284!5.87e-12!86;UBERON:0002346!6.20e-11!90;UBERON:0005743!5.34e-10!86;UBERON:0000064!1.55e-09!219;UBERON:0000489!4.42e-09!32;UBERON:0000481!1.28e-08!347;UBERON:0000020!2.70e-08!23;UBERON:0000966!3.03e-08!5;UBERON:0005388!3.03e-08!5;UBERON:0001802!3.03e-08!5;UBERON:0000073!3.90e-08!94;UBERON:0001016!3.90e-08!94;UBERON:0004121!5.52e-08!169;UBERON:0002298!8.53e-08!8;UBERON:0001032!8.69e-08!24;UBERON:0004456!8.69e-08!24;UBERON:0001017!1.56e-07!82;UBERON:0000924!1.71e-07!173;UBERON:0006601!1.71e-07!173;UBERON:0000153!2.16e-07!129;UBERON:0007811!2.16e-07!129;UBERON:0000063!3.45e-07!97;UBERON:0003076!3.88e-07!15;UBERON:0003057!3.88e-07!15;UBERON:0000062!3.99e-07!511;UBERON:0000970!4.35e-07!20;UBERON:0001049!5.10e-07!57;UBERON:0005068!5.10e-07!57;UBERON:0006241!5.10e-07!57;UBERON:0007135!5.10e-07!57;UBERON:0000922!6.61e-07!612;UBERON:0003056!8.74e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.31e-12;5!UBERON:0005388;2.31e-12;5!UBERON:0001802;2.31e-12;5!UBERON:0000922;3.74e-11;49!UBERON:0003124;1.50e-08;3!UBERON:0000920;1.50e-08;3!UBERON:0000489;2.95e-08;29!UBERON:0002240;4.36e-08;3!UBERON:0005174;4.36e-08;3!UBERON:0001137;4.36e-08;3!UBERON:0001781;5.62e-08;3!UBERON:0001782;5.62e-08;3!UBERON:0000020;6.05e-08;23!UBERON:0001896;1.13e-07;3!UBERON:0005290;1.13e-07;3!UBERON:0001032;1.60e-07;24!UBERON:0004456;1.60e-07;24!UBERON:0004211;9.19e-07;10!UBERON:0009773;9.19e-07;10!UBERON:0001231;9.19e-07;10!UBERON:0004810;9.19e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.44e-10,31;UBERON:0000966,3.00e-10,6;UBERON:0005388,3.00e-10,6;UBERON:0001802,3.00e-10,6;UBERON:0000920,1.50e-08,3;UBERON:0002240,4.42e-08,3;UBERON:0005174,4.42e-08,3;UBERON:0001137,4.42e-08,3;UBERON:0001782,5.07e-08,3;UBERON:0005424,5.07e-08,3;UBERON:0001896,1.07e-07,3;UBERON:0005290,1.07e-07,3;UBERON:0010096,1.07e-07,3;UBERON:0000020,1.85e-07,24;UBERON:0001032,1.85e-07,24;UBERON:0004456,1.85e-07,24;UBERON:0007023,4.45e-07,114;UBERON:0011216,9.00e-07,223 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.47440361900905,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,0.221729397462564,0.351339142772504,11.3296900305521,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,6.58658013099815,7.1566074893602,10.8060366868652,5.28671380578389,12.1114008420302,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37930631258681,0,0.219500570817251,0,0,4.53683381276795,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.200506470303285,0,0,0,0,1.35359883872224,2.15642943892361,3.92174884588428,0,0.633309773357254,0,0,0,0,0,1.00337954770971,2.54876273045038,4.98645605357235,0.895499018888713,0,0,19.746659633962,5.9042636225947,20.8242172585154,6.4915837338065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,17.9058363553268,0.890894042497916,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0.123084805461069,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,1.44999915086959,0,0,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.153900517007594,0,0.23056390438806,2.15418346583453,0.108647371922008,90.915330523597,48.9131148765945,200.421075783007,0,0,0,0,0,0,0,0,0,0,7.20900664313098,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.808813595768125,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0,1.20054501294127,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.04836000945218,0,0,0,0,1.35784623083787,0,21.0162088925895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0.223171457441873,0.671834724867263,0,11.6495949527454,8.11466777764404,8.57124927164131,8.08842526250219,0,0,0,0.272406812223151,8.68067001711104,7.15205070305616,6.64704540846696,0,0,0,0,27.1879690182234,65.7780535212876,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0,3.97520666736664,0,0.26446520348538,0,0,0,5.50215067848831,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,19.4959126534624,5.87923973145317,5.58867626472451,2.07522952404346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,2.3571602503328,0,0,0.135075169236789,0,0,0,2.18789923607288,2.74128883428591,2.97726707033577,0,0,3.21421101526972,4.70797211106354,0,0,26.522008678629,0,0,1.01954599465248,0,0,0,0.78493092850514,0,0.280272163313789,4.56579360254748,0,0,59.3255316666248,9.32280309223087,0,0,0,0,0,0,1.29068207646083,0,0,4.23387050190929,0,0,0,0.671132590786754,0,0.121917924982269,0,0.923965261706223,9.27851545070559,1.94284397223656,0.233939463462106,0,0,0,4.94732325354431,0,0.154348316215889,1.96703604453562,0,1.47088993052343,0,12.5637418953565,6.53502080719589,49.4507201272578,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,21.2142583064148,0,0.135982980381829,0,1.5870805215462,0,0,0.432626562123789,6.43448766658903,5.68180974211217,10.5159755839493,6.62927393322881,1.87052183685892,0.827054095813604,0,0.606229585745915,0,0,0.103432995861895,0.852935927603924,2.3806443146374,1.87307838524418,2.29676442894674,0,0,0.404234377916439,4.13661821004227,5.13349951627922,0.5388164241167,2.7254438049217,6.65320713092027,0,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,1.99727032255654,2.21401172950129,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.47440361900905,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,0.221729397462564,0.351339142772504,11.3296900305521,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,6.58658013099815,7.1566074893602,10.8060366868652,5.28671380578389,12.1114008420302,5.10968302706162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37930631258681,0,0.219500570817251,0,0,4.53683381276795,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.200506470303285,0,0,0,0,1.35359883872224,2.15642943892361,3.92174884588428,0,0.633309773357254,0,0,0,0,0,1.00337954770971,2.54876273045038,4.98645605357235,0.895499018888713,0,0,19.746659633962,5.9042636225947,20.8242172585154,6.4915837338065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83691564816031,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,17.9058363553268,0.890894042497916,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0.123084805461069,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,1.44999915086959,0,0,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.153900517007594,0,0.23056390438806,2.15418346583453,0.108647371922008,90.915330523597,48.9131148765945,200.421075783007,0,0,0,0,0,0,0,0,0,0,7.20900664313098,0,0,0.0884575645033392,2.4441205797345,0,0,0,0.808813595768125,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0,1.20054501294127,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.04836000945218,0,0,0,0,1.35784623083787,0,21.0162088925895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0.223171457441873,0.671834724867263,0,11.6495949527454,8.11466777764404,8.57124927164131,8.08842526250219,0,0,0,0.272406812223151,8.68067001711104,7.15205070305616,6.64704540846696,0,0,0,0,27.1879690182234,65.7780535212876,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0,3.97520666736664,0,0.26446520348538,0,0,0,5.50215067848831,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,19.4959126534624,5.87923973145317,5.58867626472451,2.07522952404346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,2.3571602503328,0,0,0.135075169236789,0,0,0,2.18789923607288,2.74128883428591,2.97726707033577,0,0,3.21421101526972,4.70797211106354,0,0,26.522008678629,0,0,1.01954599465248,0,0,0,0.78493092850514,0,0.280272163313789,4.56579360254748,0,0,59.3255316666248,9.32280309223087,0,0,0,0,0,0,1.29068207646083,0,0,4.23387050190929,0,0,0,0.671132590786754,0,0.121917924982269,0,0.923965261706223,9.27851545070559,1.94284397223656,0.233939463462106,0,0,0,4.94732325354431,0,0.154348316215889,1.96703604453562,0,1.47088993052343,0,12.5637418953565,6.53502080719589,49.4507201272578,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,21.2142583064148,0,0.135982980381829,0,1.5870805215462,0,0,0.432626562123789,6.43448766658903,5.68180974211217,10.5159755839493,6.62927393322881,1.87052183685892,0.827054095813604,0,0.606229585745915,0,0,0.103432995861895,0.852935927603924,2.3806443146374,1.87307838524418,2.29676442894674,0,0,0.404234377916439,4.13661821004227,5.13349951627922,0.5388164241167,2.7254438049217,6.65320713092027,0,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,1.99727032255654,2.21401172950129,0 | ||
|short_description=p1@CLDN19 | |||
}} | }} |
Latest revision as of 03:33, 18 September 2015
Short description: | p1@CLDN19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN19_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000296387, ENST00000539749, NM_001123395, NM_001185117, NM_148960, uc001cht.1, uc001chu.2, uc010ojv.1_5end |
EntrezGene: | CLDN19 |
HGNC: | 2040 |
UniProt: | Q8N6F1F5H5P9B7Z5I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.32e-12 | 5 |
chorionic membrane mesenchymal stem cell | 1.50e-08 | 3 |
retinal pigment epithelial cell | 5.07e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.44e-10 | 31 |
retina | 3.00e-10 | 6 |
photoreceptor array | 3.00e-10 | 6 |
posterior segment of eyeball | 3.00e-10 | 6 |
egg chorion | 1.50e-08 | 3 |
spinal cord | 4.42e-08 | 3 |
dorsal region element | 4.42e-08 | 3 |
dorsum | 4.42e-08 | 3 |
pigmented layer of retina | 5.07e-08 | 3 |
presumptive retinal pigmented epithelium | 5.07e-08 | 3 |
medulla oblongata | 1.07e-07 | 3 |
myelencephalon | 1.07e-07 | 3 |
future myelencephalon | 1.07e-07 | 3 |
sense organ | 1.85e-07 | 24 |
sensory system | 1.85e-07 | 24 |
entire sense organ system | 1.85e-07 | 24 |
adult organism | 4.45e-07 | 114 |
organ system subdivision | 9.00e-07 | 223 |