FFCP PHASE1:Hg19::chr1:29063272..29063283,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:29063272..29063283,+ to FFCP PHASE1:Hg19::chr1:29063272..29063283,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51441 | |EntrezGene=51441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31675 | |HGNC=31675 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5A9 | |UniProt=Q9Y5A9 | ||
|association_with_transcript=1bp_to_ENST00000373812_5end | |||
|cluster_id=chr1:29063272..29063283,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_14_at_YTHDF2_5end | |||
|id=chr1:29063272..29063283,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.84e-11!7;CL:0000586!3.84e-11!7;CL:0002322!1.04e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.63e-42;7!CL:0000586;5.63e-42;7!CL:0002322;2.17e-21;5!CL:0000540;2.07e-18;6!CL:0000404;2.07e-18;6!CL:0002321;1.62e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.26e-42,7;CL:0000586,8.26e-42,7;CL:0002322,1.28e-21,5;CL:0000540,1.54e-18,6;CL:0000031,1.54e-18,6;CL:0000404,1.54e-18,6;CL:0000047,4.63e-14,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.01e-29;10!UBERON:0005564;2.01e-29;10!CL:0000031;2.07e-18;6 | |||
|ontology_enrichment_disease=DOID:162!2.57e-13!235;DOID:14566!1.26e-12!239;DOID:0050687!2.08e-11!143;DOID:305!5.81e-09!106;DOID:3095!8.69e-08!22;DOID:2994!8.69e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.31e-25;22!DOID:2994;1.31e-25;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.64e-25,22;DOID:2994,1.64e-25,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.24e-24;8!UBERON:0003135;1.49e-17;11!UBERON:0000991;5.06e-14;21!UBERON:0003101;6.75e-09;22!UBERON:0000079;6.75e-09;22!UBERON:0000922;4.07e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.26e-24,8;UBERON:0003135,1.70e-17,11;UBERON:0000991,5.42e-14,21;UBERON:0009196,5.42e-14,21;UBERON:0009117,5.42e-14,21;UBERON:0005564,5.42e-14,21;UBERON:0004176,2.35e-13,22;UBERON:0003101,7.19e-09,22;UBERON:0000079,7.19e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.70763188581434,1.72288698817931,1.2781333715647,0.932949495138334,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,1.1528195219403,0.359030577639089,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,1.92903778158023,5.22649859069488,2.9080823662043,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.329821550236287,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,1.26166424835079,2.07604586731021,0,2.14176542458162,5.61156551057677,2.94063678511504,1.0028301571695,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0.640364075266293,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.70763188581434,1.72288698817931,1.2781333715647,0.932949495138334,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,1.1528195219403,0.359030577639089,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,1.92903778158023,5.22649859069488,2.9080823662043,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0.138348634936231,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.329821550236287,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,1.26166424835079,2.07604586731021,0,2.14176542458162,5.61156551057677,2.94063678511504,1.0028301571695,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0.640364075266293,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p14@YTHDF2 | |||
}} | }} |
Latest revision as of 10:57, 17 September 2015
Short description: | p14@YTHDF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_YTHDF2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 1bp_to_ENST00000373812_5end |
EntrezGene: | YTHDF2 |
HGNC: | 31675 |
UniProt: | Q9Y5A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.26e-42 | 7 |
germ cell | 8.26e-42 | 7 |
embryonic stem cell | 1.28e-21 | 5 |
neuron | 1.54e-18 | 6 |
neuroblast | 1.54e-18 | 6 |
electrically signaling cell | 1.54e-18 | 6 |
neuronal stem cell | 4.63e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 6.26e-24 | 8 |
male reproductive organ | 1.70e-17 | 11 |
gonad | 5.42e-14 | 21 |
indifferent external genitalia | 5.42e-14 | 21 |
indifferent gonad | 5.42e-14 | 21 |
gonad primordium | 5.42e-14 | 21 |
external genitalia | 2.35e-13 | 22 |
male organism | 7.19e-09 | 22 |
male reproductive system | 7.19e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.64e-25 | 22 |
germ cell cancer | 1.64e-25 | 22 |