FFCP PHASE1:Hg19::chr1:246023985..246024006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:246023985..246024006,- | |||
|description=CAGE_peak_at_chr1:246023985..246024006,- | |||
|id=chr1:246023985..246024006,- | |||
|ontology_enrichment_celltype=CL:0000055!6.25e-20!180;CL:0000057!9.23e-14!75;CL:0000680!2.77e-12!57;CL:0000056!2.77e-12!57;CL:0000355!2.77e-12!57;CL:0002334!3.19e-12!12;CL:0000048!9.32e-12!430;CL:0000723!3.05e-11!436;CL:0000187!3.45e-11!54;CL:0000034!1.40e-10!444;CL:0000393!2.93e-10!60;CL:0000211!2.93e-10!60;CL:0000192!5.28e-10!42;CL:0000514!5.28e-10!42;CL:0000183!1.19e-09!59;CL:0002371!8.66e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002579;5.08e-15;3!CL:0002504;4.68e-14;3!CL:1000279;4.68e-14;3!CL:1000280;4.68e-14;3!CL:0002334;1.35e-13;12!CL:0002569;4.73e-13;6!CL:0002588;1.70e-10;2!CL:0002615;1.86e-07;3!CL:0002580;3.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,4.33e-15,3;CL:0002504,5.27e-14,3;CL:1000279,5.27e-14,3;CL:1000280,5.27e-14,3;CL:0002334,1.06e-13,12;CL:0002569,3.49e-13,6;CL:0002588,1.19e-10,2;CL:0000057,2.00e-07,76;CL:0002615,2.02e-07,3;CL:0002580,3.04e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.27e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.63e-11!61;UBERON:0002036!5.63e-11!61;UBERON:0003082!5.63e-11!61;UBERON:0002385!2.17e-10!63;UBERON:0001015!2.17e-10!63;UBERON:0000383!2.17e-10!63;UBERON:0004290!1.69e-09!70;UBERON:0000914!5.49e-09!83;UBERON:0002329!5.49e-09!83;UBERON:0003077!5.49e-09!83;UBERON:0003059!5.49e-09!83;UBERON:0007282!5.49e-09!83;UBERON:0009618!5.49e-09!83;UBERON:0007285!5.49e-09!83;UBERON:0003688!7.00e-08!6;UBERON:0002358!7.00e-08!6;UBERON:0003684!7.00e-08!6;UBERON:0001178!7.00e-08!6;UBERON:0002118!1.21e-07!5;UBERON:0004532!1.21e-07!5;UBERON:0000486!4.68e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.31e-20;6!UBERON:0002358;5.31e-20;6!UBERON:0003684;5.31e-20;6!UBERON:0001178;5.31e-20;6!UBERON:0004457;3.03e-13;9!UBERON:0000042;3.03e-13;9!UBERON:0003422;4.73e-13;6!UBERON:0002331;5.70e-12;10!UBERON:0003104;3.38e-11;7!UBERON:0009142;3.38e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.16e-20,6;UBERON:0002358,5.16e-20,6;UBERON:0003684,5.16e-20,6;UBERON:0001178,5.16e-20,6;UBERON:0003422,3.49e-13,6;UBERON:0002331,4.56e-12,10;UBERON:0000358,4.56e-12,10;UBERON:0000307,4.56e-12,10;UBERON:0000091,4.56e-12,10;UBERON:0000087,4.56e-12,10;UBERON:0007010,4.56e-12,10;UBERON:0007806,4.56e-12,10;UBERON:0008780,4.56e-12,10;UBERON:0005728,4.56e-12,10;UBERON:0004457,7.29e-10,12;UBERON:0000042,7.29e-10,12 | |||
|phase1_expression=1.63510541343501,0.856402095563933,4.51054093107108,0,2.23480547213644,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0.662045904066094,1.43418310374407,0,1.12135520028461,0,1.48000529050296,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0,0.640672166455702,1.27159140695737,0,0.515262646192195,0,0,0.337552664482532,0.194874010322397,0.252433774244115,2.02509777013059,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79047667152889,0,0,0.26593811658487,1.04007436911366,0,0,0,1.14382394926518,2.71310802695722,3.29296134712308,0,0.710783897485092,1.58390374586686,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.03985430765404,0.356857977594324,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,4.71404834855676,0.61384789315225,1.40330047216537,3.45975702990393,5.11707249066703,1.44768529029247,1.48418066444991,0.308419387605311,0.177561725313127,0.328508624055237,0,0,0,0,0,1.14814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.859361958946189,0,0.170453254832202,0.979352392114111,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.572499546967965,0,0.949138274156178,2.47819252100972,0.511795582622668,0,0.636406495851874,0,1.97859703341646,1.09814811894422,1.06031162111118,0,0,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0.563391205064483,1.57752487424457,7.95817232206281,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50672522863403,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,5.20111061822734,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,2.89659637035217,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.298509605773748,1.8697064787778,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,1.08684069813382,0,1.59505028734797,1.04349012362347,0.150257608997218,0,1.22061219961398,0.909243296012797,0.214821114084977,0.464033759878494,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.850299680406731,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,11.7320471201727,0,0,0,0,0 | |phase1_expression=1.63510541343501,0.856402095563933,4.51054093107108,0,2.23480547213644,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0.662045904066094,1.43418310374407,0,1.12135520028461,0,1.48000529050296,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0,0.640672166455702,1.27159140695737,0,0.515262646192195,0,0,0.337552664482532,0.194874010322397,0.252433774244115,2.02509777013059,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79047667152889,0,0,0.26593811658487,1.04007436911366,0,0,0,1.14382394926518,2.71310802695722,3.29296134712308,0,0.710783897485092,1.58390374586686,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.03985430765404,0.356857977594324,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,4.71404834855676,0.61384789315225,1.40330047216537,3.45975702990393,5.11707249066703,1.44768529029247,1.48418066444991,0.308419387605311,0.177561725313127,0.328508624055237,0,0,0,0,0,1.14814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.859361958946189,0,0.170453254832202,0.979352392114111,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.572499546967965,0,0.949138274156178,2.47819252100972,0.511795582622668,0,0.636406495851874,0,1.97859703341646,1.09814811894422,1.06031162111118,0,0,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0.563391205064483,1.57752487424457,7.95817232206281,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50672522863403,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,5.20111061822734,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,2.89659637035217,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.298509605773748,1.8697064787778,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0,1.08684069813382,0,1.59505028734797,1.04349012362347,0.150257608997218,0,1.22061219961398,0.909243296012797,0.214821114084977,0.464033759878494,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,1.31570429747224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.850299680406731,0.123935764259002,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,11.7320471201727,0,0,0,0,0 | ||
|short_description=p@chr1:246023985..246024006,- | |||
}} | }} |
Latest revision as of 06:03, 28 July 2015
Short description: | p@chr1:246023985..246024006, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246023985..246024006, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 4.33e-15 | 3 |
enteric smooth muscle cell | 5.27e-14 | 3 |
smooth muscle cell of large intestine | 5.27e-14 | 3 |
smooth muscle cell of colon | 5.27e-14 | 3 |
preadipocyte | 1.06e-13 | 12 |
mesenchymal stem cell of umbilical cord | 3.49e-13 | 6 |
smooth muscle cell of the umbilical vein | 1.19e-10 | 2 |
fibroblast | 2.00e-07 | 76 |
adipocyte of omentum tissue | 2.02e-07 | 3 |
preadipocyte of the breast | 3.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.16e-20 | 6 |
peritoneum | 5.16e-20 | 6 |
abdominal cavity | 5.16e-20 | 6 |
visceral peritoneum | 5.16e-20 | 6 |
mesenchyme of umbilical cord | 3.49e-13 | 6 |
umbilical cord | 4.56e-12 | 10 |
blastocyst | 4.56e-12 | 10 |
blastula | 4.56e-12 | 10 |
bilaminar disc | 4.56e-12 | 10 |
inner cell mass | 4.56e-12 | 10 |
cleaving embryo | 4.56e-12 | 10 |
connecting stalk | 4.56e-12 | 10 |
inner cell mass derived epiblast | 4.56e-12 | 10 |
extraembryonic mesoderm | 4.56e-12 | 10 |
cavity lining | 7.29e-10 | 12 |
serous membrane | 7.29e-10 | 12 |