FFCP PHASE1:Hg19::chr1:22979694..22979772,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22979694..22979772,+ to FFCP PHASE1:Hg19::chr1:22979694..22979772,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt=P02746,D6RA08 | |UniProt=P02746,D6RA08 | ||
|association_with_transcript=12bp_to_ENST00000314933,ENST00000432749,NM_000491,uc001bgd.2_5end | |||
|cluster_id=chr1:22979694..22979772,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_C1QB_5end | |||
|id=chr1:22979694..22979772,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.89e-21!65;CL:0002194!8.89e-21!63;CL:0000576!8.89e-21!63;CL:0000040!8.89e-21!63;CL:0000559!8.89e-21!63;CL:0000557!1.41e-20!71;CL:0000839!2.37e-19!70;CL:0000766!9.24e-19!76;CL:0002057!8.00e-16!42;CL:0000860!1.16e-14!45;CL:0000738!1.06e-10!140;CL:0002087!5.44e-10!119;CL:0000763!1.07e-09!112;CL:0000049!1.07e-09!112;CL:0002031!1.09e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.54e-13;39!CL:0000234;4.54e-13;39!CL:0000576;1.80e-11;48!CL:0000860;1.39e-10;33!CL:0002057;1.39e-10;33!CL:0000766;3.11e-09;69!CL:0000235;6.85e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.65e-23,59;CL:0000576,6.65e-23,59;CL:0000040,6.65e-23,59;CL:0000559,6.65e-23,59;CL:0002009,9.95e-23,61;CL:0000473,2.33e-21,48;CL:0000234,2.33e-21,48;CL:0000557,4.75e-21,67;CL:0000839,1.38e-20,66;CL:0000766,4.51e-20,72;CL:0000860,6.36e-16,42;CL:0002057,6.36e-16,42;CL:0000763,7.80e-09,108;CL:0000049,7.80e-09,108;CL:0000235,6.86e-08,6;CL:0002087,4.43e-07,115;CL:0000738,8.02e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.10e-12;42!UBERON:0006601;4.90e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.37e-78!115;UBERON:0001049!1.17e-32!57;UBERON:0005068!1.17e-32!57;UBERON:0006241!1.17e-32!57;UBERON:0007135!1.17e-32!57;UBERON:0002616!4.27e-26!59;UBERON:0001017!1.08e-25!82;UBERON:0003080!1.09e-25!42;UBERON:0002780!6.07e-25!41;UBERON:0001890!6.07e-25!41;UBERON:0006240!6.07e-25!41;UBERON:0005743!1.21e-24!86;UBERON:0000955!1.88e-22!69;UBERON:0006238!1.88e-22!69;UBERON:0002390!6.77e-22!102;UBERON:0003061!6.77e-22!102;UBERON:0003075!1.86e-21!86;UBERON:0007284!1.86e-21!86;UBERON:0000073!4.86e-21!94;UBERON:0001016!4.86e-21!94;UBERON:0002020!5.64e-20!34;UBERON:0003528!5.64e-20!34;UBERON:0001893!7.28e-20!34;UBERON:0002193!1.01e-19!112;UBERON:0002346!1.60e-19!90;UBERON:0002791!3.03e-19!33;UBERON:0001869!3.62e-18!32;UBERON:0002371!1.50e-17!80;UBERON:0002619!6.25e-16!22;UBERON:0001474!5.24e-15!86;UBERON:0002405!8.08e-15!115;UBERON:0003056!9.55e-15!61;UBERON:0001950!2.40e-14!20;UBERON:0000062!2.36e-13!511;UBERON:0000956!4.58e-13!25;UBERON:0000203!4.58e-13!25;UBERON:0004765!2.11e-11!101;UBERON:0001434!2.11e-11!101;UBERON:0000467!8.14e-11!625;UBERON:0000153!1.06e-10!129;UBERON:0007811!1.06e-10!129;UBERON:0000480!1.07e-10!626;UBERON:0000922!2.06e-10!612;UBERON:0002050!4.81e-10!605;UBERON:0005423!4.81e-10!605;UBERON:0000468!6.02e-10!659;UBERON:0000923!9.48e-10!604;UBERON:0005291!9.48e-10!604;UBERON:0006598!9.48e-10!604;UBERON:0002532!9.48e-10!604;UBERON:0000033!1.13e-09!123;UBERON:0000479!7.25e-09!787;UBERON:0002420!8.27e-09!9;UBERON:0007245!8.27e-09!9;UBERON:0010009!8.27e-09!9;UBERON:0010011!8.27e-09!9;UBERON:0000454!8.27e-09!9;UBERON:0002308!1.02e-08!9;UBERON:0000125!1.02e-08!9;UBERON:0004121!1.09e-08!169;UBERON:0003076!4.11e-08!15;UBERON:0003057!4.11e-08!15;UBERON:0002298!4.28e-08!8;UBERON:0000924!5.00e-08!173;UBERON:0006601!5.00e-08!173;UBERON:0009663!3.76e-07!7;UBERON:0003081!4.53e-07!216;UBERON:0001871!4.56e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.18e-21;114!UBERON:0002780;1.62e-20;41!UBERON:0001890;1.62e-20;41!UBERON:0003528;5.36e-19;34!UBERON:0002020;5.36e-19;34!UBERON:0001893;6.37e-19;34!UBERON:0000073;8.46e-19;53!UBERON:0002616;8.46e-19;53!UBERON:0002791;1.18e-18;32!UBERON:0001869;2.12e-18;32!UBERON:0002619;9.62e-18;22!UBERON:0001950;5.83e-16;20!UBERON:0000956;9.62e-15;25!UBERON:0000203;9.62e-15;25!UBERON:0000955;1.27e-11;68!UBERON:0001017;2.21e-11;75!UBERON:0001016;7.93e-10;83!UBERON:0002420;1.02e-09;9!UBERON:0007245;1.02e-09;9!UBERON:0010009;1.02e-09;9!UBERON:0010011;1.02e-09;9!UBERON:0000454;1.02e-09;9!UBERON:0000125;1.29e-09;9!UBERON:0002308;1.29e-09;9!UBERON:0009663;7.44e-08;7!UBERON:0001894;3.21e-07;7!UBERON:0002298;4.51e-07;6!UBERON:0001871;7.42e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.68e-84,114;UBERON:0001049,4.91e-35,56;UBERON:0005068,4.91e-35,56;UBERON:0006241,4.91e-35,56;UBERON:0007135,4.91e-35,56;UBERON:0000073,1.75e-32,53;UBERON:0002616,1.75e-32,53;UBERON:0002780,3.79e-28,41;UBERON:0001890,3.79e-28,41;UBERON:0003080,3.79e-28,41;UBERON:0006240,3.79e-28,41;UBERON:0001017,1.06e-26,81;UBERON:0000955,1.27e-24,68;UBERON:0006238,1.27e-24,68;UBERON:0003075,2.13e-23,82;UBERON:0007284,2.13e-23,82;UBERON:0001016,5.31e-23,89;UBERON:0003528,1.53e-22,34;UBERON:0002020,1.53e-22,34;UBERON:0001893,2.04e-22,34;UBERON:0002346,2.14e-21,86;UBERON:0002791,8.57e-21,32;UBERON:0001869,1.68e-20,32;UBERON:0002390,2.18e-20,98;UBERON:0003061,2.18e-20,98;UBERON:0002193,1.34e-18,108;UBERON:0002619,9.76e-18,22;UBERON:0002371,1.97e-17,76;UBERON:0002405,5.18e-17,93;UBERON:0003056,1.50e-16,61;UBERON:0001950,5.94e-16,20;UBERON:0002050,2.46e-15,564;UBERON:0000923,2.53e-15,560;UBERON:0010316,2.53e-15,560;UBERON:0005291,2.53e-15,560;UBERON:0006598,2.53e-15,560;UBERON:0010317,2.53e-15,560;UBERON:0002532,2.53e-15,560;UBERON:0010371,3.32e-15,104;UBERON:0001474,5.46e-15,82;UBERON:0000956,9.74e-15,25;UBERON:0000203,9.74e-15,25;UBERON:0005423,1.92e-14,581;UBERON:0000922,3.37e-14,592;UBERON:0011216,1.39e-13,223;UBERON:0010314,1.46e-13,132;UBERON:0004765,2.66e-12,90;UBERON:0001434,7.80e-11,100;UBERON:0000479,2.09e-10,773;UBERON:0002420,1.01e-09,9;UBERON:0007245,1.01e-09,9;UBERON:0010009,1.01e-09,9;UBERON:0010011,1.01e-09,9;UBERON:0000454,1.01e-09,9;UBERON:0000125,1.29e-09,9;UBERON:0002308,1.29e-09,9;UBERON:0004121,2.64e-09,171;UBERON:0000924,2.64e-09,171;UBERON:0006601,2.64e-09,171;UBERON:0003081,3.95e-08,203;UBERON:0003076,4.09e-08,15;UBERON:0003057,4.09e-08,15;UBERON:0009663,7.40e-08,7;UBERON:0001894,3.18e-07,7;UBERON:0006222,3.18e-07,7;UBERON:0000025,4.28e-07,192;UBERON:0002298,4.54e-07,6;UBERON:0001871,7.46e-07,6 | |||
|phase1_expression=0,1.92690471501885,0,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0,0,13.4465029290355,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,3.14691421479123,2.68680578668049,6.03782880932696,0,0,0,0,0,0.293600439334847,1.66198622559563,1.40381113229099,1.51907609501096,14510.6183926441,13595.7605248127,13355.8083329678,3.19876125315042,7.935394817465,4.36651310138069,2.09186133215116,6.16751832032739,3.09706370895104,14.0969272237854,37.9117845663069,40.2019790810595,4.13694816883942,3.22742341791913,1.35426486594342,2.63539275359647,6.5497476013883,7.19115150224271,4.89734227793444,10.9115869205872,11.5080682643827,11.5447955065351,30.318475958488,29.8357325372886,2.32167390902867,5.10646702222026,7.4738669879469,10.3011952755265,29.2030434315313,28.8861163457805,4.23779651843358,2.20966581592539,8.22802207346299,62.1090541757109,132.665083178187,64.3652041710714,0.336985893439485,0.300353785683013,0,51.3022938734247,173.654259194806,99.9172921092548,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,19.4904222733557,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0.651083453856419,0,0.451725357233318,0.383959833463255,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614843499851882,315.201145185245,0,0,1406.5884040994,1593.46122602559,1706.91429714119,0.715471872916026,6.86393892936153,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,5.67469411517371,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.0397656698239,179.857380652006,547.07145358698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1418.4561720695,424.717741227716,558.258645556463,0,0,0,0,0,0,0,0,0.829312462163088,3.747118788841,3.02981840223312,0.126995788584338,0,0,1.71072446022705,0,0,0,0,7.84728123899904,0,0,3.57656445851882,1.690605505112,0,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0,0,941.368062162814,1784.51944585835,683.101963925022,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,156.460191822282,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,3.10152039184331,11.8642810450239,8.4314770664721,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,823.915929135187,0,0,0,0,0,0,0,0,0,0,0,8.52266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.418113764369,0,0,0,0,0,3.58882980006029,0,0,0,0,5.3624182042863,0,847.105919389459,0,0,0,0,1.01489521846434,0.764637207142375,3.41788312304498,1.90585420366231,0.822724546172388,1.29694662238543,4.86028293514303,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,802.13228151362,0,0.111443384277478,0,22.4419815653429,0.296964680832639,2.76444631889309,286.314522556694,436.919207371053,0,0,0.211125408127993,276.755455680736,121.841206749236,0,0,0.615424027305347,0,0,0,0,157.138945179635,9.57932369387759,0,81.4239506719984,300.754174240722,67.868691320406,0,0,184.874891735872,0,0,0,0,0,0,188.662915178348,449.824716072772,35.0937993529291,56.7271603447182,71.2269761678049,50.2392559482597,0,0,76.2577061772629,0,0,0,0,146.740533476683,15.4799932849147,610.857853317355,0,0,0,0,0,0,0,0,0,0,0,0,58.7204539336318,380.632900057868,124.65014956646,0,0,0.417687798021821,372.660864250163,72.231988256891,157.425707527428,0,0,0,27.2263237966079,88.3232227155246,14.0793470350025,2169.89033102191,0,0,0,0,0,0,0,0,0,0,0,359.412756573856,0,0.0967563312890851,0,0,128.510446847156,0,156.83063410169,0,0,96.1057882610239,0,0,95.4134886484906,0,0,0,0,0,0,0,0,0,0,0,255.178622701661,798.569075076995,0,0,0,128.190622183965,75.8521003478673,41.6366354254552,149.160213372746,321.061084006155,249.505689420013,97.0129342708327,0,0,0,0,0,0,0.0846733320657845,270.378094535163,315.719495366632,0,0,0,14.398329059296,0.77380195455795,123.260850459132,0,280.863540814342,112.620000725841,0,0,0,400.944078095459,298.60347863481,0,0,0,0,0,0,0,0,561.73471168809,481.000006751363,146.089740688552,494.153232712432,0,0,1022.16911309797,104.698067196378,562.950876216839,1064.27611678663,0,0.121792598380896,0,12.5124094774979,23.8155399321565,31.8599399834,9.83617892129413,0,69.1133180374249,97.6210119215705,313.853663281195,285.557779453655,604.563330875845,492.85915014576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,337.627101082527,0,0.265729680626726,0.163565394255844,0,0,0,0.19998739585493,0,4.64980445084202,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,135.973269529205,60.9295278200015,407.545242172907,41.843738305114,12.3515131148642,109.060987136072,98.661619481061,48.5416028881125,0,0,0,0,0,0,0,135.604222013711,0,137.546465977024,0,0,0,100.833613835263,85.9185908475232,287.501333933147,98.8652480923007,2.18789923607288,55.922292219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| ||
|short_description=p1@C1QB | |||
}} | }} |
Latest revision as of 06:31, 16 September 2015
Short description: | p1@C1QB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 12bp_to_ENST00000314933, ENST00000432749, NM_000491, uc001bgd.2_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | P02746D6RA08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.65e-23 | 59 |
monocyte | 6.65e-23 | 59 |
monoblast | 6.65e-23 | 59 |
promonocyte | 6.65e-23 | 59 |
macrophage dendritic cell progenitor | 9.95e-23 | 61 |
defensive cell | 2.33e-21 | 48 |
phagocyte | 2.33e-21 | 48 |
granulocyte monocyte progenitor cell | 4.75e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.38e-20 | 66 |
myeloid leukocyte | 4.51e-20 | 72 |
classical monocyte | 6.36e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.36e-16 | 42 |
myeloid cell | 7.80e-09 | 108 |
common myeloid progenitor | 7.80e-09 | 108 |
macrophage | 6.86e-08 | 6 |
nongranular leukocyte | 4.43e-07 | 115 |
leukocyte | 8.02e-07 | 136 |