FFCP PHASE1:Hg19::chr1:226496833..226496884,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:226496833..226496884,- to FFCP PHASE1:Hg19::chr1:226496833..226496884,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286826 | |EntrezGene=286826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30830 | |HGNC=30830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460719_5end | |||
|cluster_id=chr1:226496833..226496884,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_LIN9_5end | |||
|id=chr1:226496833..226496884,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.61e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.34e-51!235;DOID:14566!4.54e-50!239;DOID:0050687!1.28e-30!143;DOID:305!1.60e-25!106;DOID:0050686!5.37e-24!137;DOID:2531!4.14e-18!51;DOID:0060083!4.14e-18!51;DOID:1240!5.92e-15!39;DOID:8692!1.13e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.47e-12;39!DOID:8692;1.34e-11;31!DOID:2531;1.86e-11;51!DOID:0060083;1.86e-11;51!DOID:305;6.87e-08;106!DOID:0050687;1.89e-07;143!DOID:14566;8.61e-07;239!DOID:3095;8.97e-07;22!DOID:2994;8.97e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.60e-52,235;DOID:14566,3.72e-50,239;DOID:0050687,9.47e-31,143;DOID:305,1.36e-25,106;DOID:0050686,4.65e-24,137;DOID:2531,3.70e-18,51;DOID:0060083,3.70e-18,51;DOID:1240,5.41e-15,39;DOID:8692,1.06e-11,31;DOID:3095,9.43e-07,22;DOID:2994,9.43e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@LIN9 | |||
}} | }} |
Latest revision as of 01:28, 16 September 2015
Short description: | p1@LIN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIN9_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000460719_5end |
EntrezGene: | LIN9 |
HGNC: | 30830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 8.60e-52 | 235 |
disease of cellular proliferation | 3.72e-50 | 239 |
cell type cancer | 9.47e-31 | 143 |
carcinoma | 1.36e-25 | 106 |
organ system cancer | 4.65e-24 | 137 |
hematologic cancer | 3.70e-18 | 51 |
immune system cancer | 3.70e-18 | 51 |
leukemia | 5.41e-15 | 39 |
myeloid leukemia | 1.06e-11 | 31 |
germ cell and embryonal cancer | 9.43e-07 | 22 |
germ cell cancer | 9.43e-07 | 22 |