FFCP PHASE1:Hg19::chr1:209826369..209826380,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:209826369..209826380,- to FFCP PHASE1:Hg19::chr1:209826369..209826380,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209826369..209826380,- | |||
|coexpression_cluster_id=C2562 | |||
|description=CAGE_peak_at_chr1:209826369..209826380,- | |||
|id=chr1:209826369..209826380,- | |||
|ontology_enrichment_celltype=CL:0002076!3.08e-30!43;CL:0000066!4.04e-29!254;CL:0002368!3.38e-23!13;CL:0000223!1.69e-21!59;CL:0002202!2.92e-15!9;CL:0002632!2.92e-15!9;CL:0002251!3.31e-14!21;CL:0002159!3.55e-13!13;CL:0000244!2.31e-10!4;CL:0000731!2.31e-10!4;CL:0002621!3.02e-08!3;CL:0002328!5.34e-08!3;CL:0000068!7.47e-08!3;CL:0000069!7.47e-08!3;CL:0000307!7.47e-08!3;CL:0000377!7.47e-08!3;CL:0000076!1.99e-07!62;CL:0002077!2.32e-07!33;CL:0000362!3.75e-07!8;CL:0000622!9.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.93e-42;13!CL:0002076;5.10e-29;42!CL:0002159;3.34e-25;14!CL:0000244;1.74e-24;4!CL:0000731;1.74e-24;4!CL:0002202;7.83e-23;9!CL:0002632;7.83e-23;9!CL:0002621;5.70e-19;3!CL:0002328;2.36e-18;3!CL:0000307;6.35e-18;3!CL:0000240;6.01e-16;6!CL:0000311;6.01e-16;6!CL:0000079;6.01e-16;6!CL:0000237;6.01e-16;6!CL:0002327;2.77e-13;4!CL:0002077;7.75e-13;34!CL:0000575;1.32e-12;2!CL:0000312;3.14e-11;5!CL:0000362;1.68e-10;9!CL:0002166;1.36e-08;3!CL:0002231;1.36e-08;3!CL:0002251;3.12e-07;20!CL:0002336;3.50e-07;1!CL:0002261;3.50e-07;1!CL:0002170;3.50e-07;1!CL:0002252;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.52e-42,13;CL:0002076,3.91e-36,42;CL:0002159,3.24e-25,14;CL:0000223,3.66e-25,58;CL:0000244,1.74e-24,4;CL:0000731,1.74e-24,4;CL:0002202,7.84e-23,9;CL:0002632,7.84e-23,9;CL:0000066,1.88e-20,253;CL:0002621,5.70e-19,3;CL:0002328,2.50e-18,3;CL:0000068,6.00e-18,3;CL:0000069,6.00e-18,3;CL:0000307,6.00e-18,3;CL:0000377,6.00e-18,3;CL:0000240,4.96e-16,6;CL:0000311,4.96e-16,6;CL:0000079,4.96e-16,6;CL:0000237,4.96e-16,6;CL:0000036,4.96e-16,6;CL:0000357,4.96e-16,6;CL:0000114,4.96e-16,6;CL:0002077,5.44e-15,34;CL:0002327,2.89e-13,4;CL:0000575,1.21e-12,2;CL:0000312,2.98e-11,5;CL:0002321,3.45e-11,250;CL:0000362,1.68e-10,9;CL:0002166,1.39e-08,3;CL:0002231,1.68e-08,3;CL:0000221,2.64e-07,72;CL:0002336,2.84e-07,1;CL:0002261,2.84e-07,1;CL:0002170,2.84e-07,1;CL:0002251,2.93e-07,20;CL:0002252,5.78e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;6.35e-18;3!CL:0000357;6.01e-16;6!CL:0000114;6.01e-16;6!CL:0000223;4.51e-15;58 | |||
|ontology_enrichment_disease=DOID:1749!3.07e-12!14;DOID:305!1.02e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.60e-19!169;UBERON:0000925!1.60e-19!169;UBERON:0006595!1.60e-19!169;UBERON:0001004!1.19e-16!72;UBERON:0007196!5.16e-14!14;UBERON:0001558!5.16e-14!14;UBERON:0005910!3.75e-13!6;UBERON:0000065!4.60e-12!53;UBERON:0001007!6.03e-12!155;UBERON:0001555!6.03e-12!155;UBERON:0007026!6.03e-12!155;UBERON:0000365!8.53e-12!5;UBERON:0005911!1.17e-11!82;UBERON:0003729!4.47e-10!5;UBERON:0000161!1.26e-09!35;UBERON:0000166!1.63e-09!21;UBERON:0000344!3.13e-09!12;UBERON:0005178!3.77e-09!34;UBERON:0002224!3.77e-09!34;UBERON:0000072!8.52e-09!46;UBERON:0005181!8.63e-09!35;UBERON:0001949!3.02e-08!3;UBERON:0005153!3.10e-08!37;UBERON:0000165!4.99e-08!28;UBERON:0000930!4.99e-08!28;UBERON:0004815!5.34e-08!3;UBERON:0002031!5.34e-08!3;UBERON:0003343!5.59e-08!4;UBERON:0004785!5.59e-08!4;UBERON:0003126!9.24e-08!7;UBERON:0001005!9.24e-08!7;UBERON:0008947!1.21e-07!38;UBERON:0003258!1.21e-07!38;UBERON:0004807!2.87e-07!28;UBERON:0005157!4.50e-07!51;UBERON:0004921!5.25e-07!129;UBERON:0004185!5.25e-07!129;UBERON:0000077!6.00e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.94e-24;12!UBERON:0000365;1.25e-19;5!UBERON:0001949;5.70e-19;3!UBERON:0004815;2.36e-18;3!UBERON:0002031;2.36e-18;3!UBERON:0005910;2.19e-16;6!UBERON:0007196;1.73e-13;15!UBERON:0001558;1.73e-13;15!UBERON:0001911;2.77e-13;4!UBERON:0005911;7.37e-12;36!UBERON:0002185;3.20e-11;5!UBERON:0004807;2.80e-09;22!UBERON:0000065;1.30e-08;44!UBERON:0010371;1.41e-08;31!UBERON:0003929;2.12e-08;7!UBERON:0000485;3.83e-08;7!UBERON:0003126;5.77e-08;7!UBERON:0001005;5.77e-08;7!UBERON:0003729;1.38e-07;13!UBERON:0005178;1.49e-07;34!UBERON:0002224;1.49e-07;34!UBERON:0003350;2.12e-07;8!UBERON:0001828;2.12e-07;8!UBERON:0005181;6.85e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.25e-19,5;UBERON:0001949,5.70e-19,3;UBERON:0004815,2.50e-18,3;UBERON:0002031,2.50e-18,3;UBERON:0005910,2.20e-16,6;UBERON:0007196,1.73e-13,15;UBERON:0001558,1.73e-13,15;UBERON:0001911,2.89e-13,4;UBERON:0005333,2.89e-13,4;UBERON:0008425,2.89e-13,4;UBERON:0005311,2.89e-13,4;UBERON:0004119,1.77e-11,160;UBERON:0000925,1.77e-11,160;UBERON:0006595,1.77e-11,160;UBERON:0002185,3.31e-11,5;UBERON:0001004,1.22e-10,74;UBERON:0005157,2.00e-10,47;UBERON:0000065,7.49e-09,54;UBERON:0005153,9.80e-09,37;UBERON:0003102,1.23e-08,99;UBERON:0005911,4.66e-08,82;UBERON:0003126,5.64e-08,7;UBERON:0001005,5.64e-08,7;UBERON:0003729,1.30e-07,13;UBERON:0005178,1.70e-07,34;UBERON:0002224,1.70e-07,34;UBERON:0003350,2.12e-07,8;UBERON:0001828,2.12e-07,8;UBERON:0005181,2.95e-07,35;UBERON:0004807,3.74e-07,28;UBERON:0000076,7.20e-07,8;UBERON:0000964,9.76e-07,4;UBERON:0010409,9.76e-07,4;UBERON:0004348,9.76e-07,4;UBERON:0005427,9.76e-07,4 | |||
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| ||
|short_description=p@chr1:209826369..209826380,- | |||
}} | }} |
Latest revision as of 03:21, 28 July 2015
Short description: | p@chr1:209826369..209826380, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209826369..209826380, - |
Coexpression cluster: | C2562_Urothelial_Gingival_Keratinocyte_Mammary_Bronchial_Small_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 1.25e-19 | 5 |
gingival epithelium | 5.70e-19 | 3 |
lower respiratory tract epithelium | 2.50e-18 | 3 |
epithelium of bronchus | 2.50e-18 | 3 |
transitional epithelium | 2.20e-16 | 6 |
tracheobronchial tree | 1.73e-13 | 15 |
lower respiratory tract | 1.73e-13 | 15 |
mammary gland | 2.89e-13 | 4 |
mammary bud | 2.89e-13 | 4 |
mammary ridge | 2.89e-13 | 4 |
mammary placode | 2.89e-13 | 4 |
endoderm-derived structure | 1.77e-11 | 160 |
endoderm | 1.77e-11 | 160 |
presumptive endoderm | 1.77e-11 | 160 |
bronchus | 3.31e-11 | 5 |
respiratory system | 1.22e-10 | 74 |
epithelial fold | 2.00e-10 | 47 |
respiratory tract | 7.49e-09 | 54 |
epithelial bud | 9.80e-09 | 37 |
surface structure | 1.23e-08 | 99 |
endo-epithelium | 4.66e-08 | 82 |
trachea | 5.64e-08 | 7 |
respiratory airway | 5.64e-08 | 7 |
mouth mucosa | 1.30e-07 | 13 |
thoracic cavity element | 1.70e-07 | 34 |
thoracic cavity | 1.70e-07 | 34 |
epithelium of mucosa | 2.12e-07 | 8 |
gingiva | 2.12e-07 | 8 |
thoracic segment organ | 2.95e-07 | 35 |
respiratory system epithelium | 3.74e-07 | 28 |
external ectoderm | 7.20e-07 | 8 |
cornea | 9.76e-07 | 4 |
eye surface | 9.76e-07 | 4 |
optic eminence | 9.76e-07 | 4 |
corneal primordium | 9.76e-07 | 4 |