FFCP PHASE1:Hg19::chr1:197964894..197964906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:197964894..197964906,- | |||
|coexpression_cluster_id=C326 | |||
|description=CAGE_peak_at_chr1:197964894..197964906,- | |||
|id=chr1:197964894..197964906,- | |||
|ontology_enrichment_celltype=CL:0000159!1.95e-10!2;CL:0000066!3.77e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!4.81e-18!25;DOID:305!1.44e-15!106;DOID:162!1.47e-15!235;DOID:1036!2.88e-15!8;DOID:14566!4.33e-15!239;DOID:3493!2.59e-11!2;DOID:0050687!2.60e-10!143;DOID:0050686!1.35e-09!137;DOID:2531!2.46e-09!51;DOID:0060083!2.46e-09!51;DOID:8692!6.03e-09!31;DOID:1240!1.19e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.09e-27;2!DOID:299;8.48e-19;25!DOID:1036;1.41e-15;8!DOID:3111;2.41e-14;1!DOID:3603;2.41e-14;1!DOID:3910;4.38e-08;2!DOID:4468;5.94e-08;2!DOID:4929;5.94e-08;2!DOID:8692;8.78e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.40e-27,2;DOID:299,8.22e-19,25;DOID:1036,1.41e-15,8;DOID:3111,2.75e-14,1;DOID:3603,2.75e-14,1;DOID:305,2.17e-11,106;DOID:162,1.77e-09,235;DOID:14566,3.01e-09,239;DOID:0050687,3.89e-08,143;DOID:3910,4.38e-08,2;DOID:4468,5.74e-08,2;DOID:4929,6.58e-08,2;DOID:8692,3.96e-07,31;DOID:0050686,7.25e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002394!4.58e-12!4;UBERON:0003928!4.58e-12!4;UBERON:0002294!1.08e-11!7;UBERON:0001173!1.08e-11!7;UBERON:0004912!1.08e-11!7;UBERON:0007499!2.32e-11!25;UBERON:0009497!3.01e-11!25;UBERON:0000015!3.01e-11!25;UBERON:0002423!3.01e-11!25;UBERON:0006235!3.01e-11!25;UBERON:0004161!3.01e-11!25;UBERON:0009856!7.11e-11!26;UBERON:0005911!5.44e-10!82;UBERON:0008835!5.59e-10!22;UBERON:0003894!5.59e-10!22;UBERON:0009854!1.67e-09!23;UBERON:0003929!1.15e-08!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.31e-14;1!UBERON:0003703;1.31e-14;1!UBERON:0001174;1.31e-14;1!UBERON:0004914;1.31e-14;1!UBERON:0002394;1.91e-14;4!UBERON:0003928;1.91e-14;4!UBERON:0000058;9.46e-13;10!UBERON:0002294;1.20e-08;7!UBERON:0001173;1.20e-08;7!UBERON:0004903;4.38e-08;2!UBERON:0002173;4.38e-08;2!UBERON:0002186;4.38e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.61e-14,1;UBERON:0003703,1.61e-14,1;UBERON:0001174,1.61e-14,1;UBERON:0004914,1.61e-14,1;UBERON:0002394,6.50e-10,6;UBERON:0003928,6.50e-10,6;UBERON:0007499,8.60e-09,25;UBERON:0009856,1.84e-08,26;UBERON:0004903,4.38e-08,2;UBERON:0002173,4.38e-08,2;UBERON:0002186,4.38e-08,2;UBERON:0000058,5.99e-07,19;UBERON:0002294,6.79e-07,9;UBERON:0001173,6.79e-07,9;UBERON:0004912,6.79e-07,9 | |||
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|short_description=p@chr1:197964894..197964906,- | |||
}} | }} |
Latest revision as of 01:52, 28 July 2015
Short description: | p@chr1:197964894..197964906, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:197964894..197964906, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.61e-14 | 1 |
extrahepatic bile duct | 1.61e-14 | 1 |
common bile duct | 1.61e-14 | 1 |
duodenal papilla | 1.61e-14 | 1 |
bile duct | 6.50e-10 | 6 |
digestive system duct | 6.50e-10 | 6 |
epithelial sac | 8.60e-09 | 25 |
sac | 1.84e-08 | 26 |
bronchoalveolar duct junction | 4.38e-08 | 2 |
alveolar duct | 4.38e-08 | 2 |
bronchiole | 4.38e-08 | 2 |
duct | 5.99e-07 | 19 |
biliary system | 6.79e-07 | 9 |
biliary tree | 6.79e-07 | 9 |
biliary bud | 6.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.40e-27 | 2 |
adenocarcinoma | 8.22e-19 | 25 |
chronic leukemia | 1.41e-15 | 8 |
cystadenocarcinoma | 2.75e-14 | 1 |
mucinous cystadenocarcinoma | 2.75e-14 | 1 |
carcinoma | 2.17e-11 | 106 |
cancer | 1.77e-09 | 235 |
disease of cellular proliferation | 3.01e-09 | 239 |
cell type cancer | 3.89e-08 | 143 |
lung adenocarcinoma | 4.38e-08 | 2 |
clear cell adenocarcinoma | 5.74e-08 | 2 |
tubular adenocarcinoma | 6.58e-08 | 2 |
myeloid leukemia | 3.96e-07 | 31 |
organ system cancer | 7.25e-07 | 137 |