FFCP PHASE1:Hg19::chr1:179851224..179851247,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:179851224..179851247,+ to FFCP PHASE1:Hg19::chr1:179851224..179851247,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26092 | |EntrezGene=26092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29456 | |HGNC=29456 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKD1 | |UniProt=E9PKD1 | ||
|association_with_transcript=47bp_to_ENST00000528443_5end | |||
|cluster_id=chr1:179851224..179851247,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TOR1AIP1_5end | |||
|id=chr1:179851224..179851247,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.87e-24!42;CL:0000860!1.38e-23!45;CL:0000037!3.64e-20!172;CL:0000566!3.64e-20!172;CL:0000557!4.13e-20!71;CL:0000763!1.45e-19!112;CL:0000049!1.45e-19!112;CL:0000839!3.98e-19!70;CL:0002009!8.52e-19!65;CL:0000738!1.17e-18!140;CL:0000988!1.54e-18!182;CL:0002032!1.94e-18!165;CL:0000837!1.94e-18!165;CL:0002194!1.05e-17!63;CL:0000576!1.05e-17!63;CL:0000040!1.05e-17!63;CL:0000559!1.05e-17!63;CL:0002031!1.48e-17!124;CL:0000766!1.80e-17!76;CL:0002087!1.14e-15!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.98e-50;33!CL:0002057;8.98e-50;33!CL:0000473;6.59e-36;39!CL:0000234;6.59e-36;39!CL:0000576;7.78e-28;48!CL:0000766;5.57e-17;69!CL:0002087;3.46e-12;104!CL:0000738;1.80e-09;136!CL:0000763;1.96e-09;100!CL:0000624;4.45e-08;6!CL:0000988;1.82e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.91e-51,42;CL:0002057,6.91e-51,42;CL:0000473,1.68e-45,48;CL:0000234,1.68e-45,48;CL:0002009,1.32e-38,61;CL:0000738,1.12e-37,136;CL:0000557,3.53e-36,67;CL:0002194,7.49e-36,59;CL:0000576,7.49e-36,59;CL:0000040,7.49e-36,59;CL:0000559,7.49e-36,59;CL:0000037,1.40e-34,168;CL:0002087,1.98e-34,115;CL:0000988,3.21e-33,177;CL:0000766,1.40e-32,72;CL:0002031,1.70e-32,120;CL:0002032,1.06e-31,161;CL:0000837,1.06e-31,161;CL:0000839,7.85e-31,66;CL:0000763,2.41e-29,108;CL:0000049,2.41e-29,108;CL:0000134,1.32e-14,354;CL:0002320,6.45e-14,361;CL:0000219,3.80e-12,386;CL:0000034,3.20e-10,441;CL:0000048,3.74e-10,427;CL:0000723,9.97e-10,433;CL:0000624,5.73e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.72e-38;42!CL:0000049;4.65e-09;108 | |||
|ontology_enrichment_disease=DOID:162!9.34e-12!235;DOID:14566!2.40e-11!239;DOID:0050687!2.65e-09!143;DOID:305!1.35e-07!106;DOID:0050686!2.58e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.67e-16!80;UBERON:0001474!1.84e-16!86;UBERON:0002390!9.19e-15!102;UBERON:0003061!9.19e-15!102;UBERON:0002193!2.34e-13!112;UBERON:0004765!5.17e-11!101;UBERON:0001434!5.17e-11!101;UBERON:0002405!1.06e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.52e-32,76;UBERON:0001474,2.03e-30,82;UBERON:0002390,9.34e-28,98;UBERON:0003061,9.34e-28,98;UBERON:0004765,1.42e-26,90;UBERON:0002405,2.03e-25,93;UBERON:0002193,6.26e-24,108;UBERON:0001434,1.20e-22,100;UBERON:0002384,5.54e-13,371;UBERON:0003081,2.31e-10,203;UBERON:0002204,1.51e-09,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,2.75354993794233,1.53531759238885,1.08371286321253,0,0.30120591877825,0,0.154934401160603,0.142169232487422,1.17440175733939,1.10799081706375,1.40381113229099,1.51907609501096,0.223915474239924,0.32389366601898,0,2.32637182047304,3.40088349319928,2.18325655069035,3.95129362739664,3.28934310417461,2.47765096716083,3.74000110018796,6.66017836975662,5.20260905754887,7.92915065694223,4.51839278508678,4.06279459783025,2.25890807451126,2.18324920046277,4.04502272001152,20.5076207888505,6.73950956859797,11.5080682643827,4.28806690242731,5.38551875578406,5.54092175692502,17.9929727949722,14.1846306172785,10.5879782329248,4.77372463987812,5.21482918420201,4.99534342821768,26.6375781158682,16.2042159834528,18.6712808590122,1.26753171787165,0,0.838634582033504,1.01095768031846,0.600707571366025,0.964353520182481,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,1.70763890732835,1.76171156811282,2.29363936875137,1.32171328579026,1.68152568894461,0.526768169550154,3.14735632182133,3.53709686474248,2.46721798799411,0.167186495390678,0.977766799900771,0.946895611469467,0,0.668462741311041,1.17842362989935,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,0,0.276350017785848,0,1.4828656316206,0.802622484269139,0,0,2.29932296161153,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0,0,0,0,0,2.21767417547206,1.60464117470104,2.75166367377318,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0.649094787309367,1.0447784237956,0.398873881556595,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.17859945656816,0.22452937262617,0,1.53316637465883,0,0.183201743930407,0,0,0,0.496971951695318,0,1.32409180813219,0.286836620748814,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,1.4351170855109,0,0.423863802319124,0.600182192168805,0.206105058476878,1.8034837803194,0.18611685633159,0.506328996723799,0.194874010322397,1.51460264546469,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,1.18157981336281,1.7658523976586,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.414656231081544,0.432359860250884,0.50496973370552,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0,1.77327684181734,1.72502059887614,1.54011643535698,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,0.320182673410333,0.303127571446259,0,0,0,1.53461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0.254876273045038,0,0.447749509444357,0.657779629937804,0.784306353074702,0,0,0,0.515205058238611,0.183138929636687,0.165018999841176,0.574265537996172,0,0,0,0,0.307007349452259,0,0.214840489736547,0.145016693914229,0,0.267096106940212,0.495854746082934,0.960950336825531,0.638063562472921,0.2023155617111,0,1.5740617341532,0.6970372701606,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0.78494864019923,0,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,1.22520107990516,0,0,0.213425530045242,0.159426272728822,0.199579371432817,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0.313359791546046,0,0,0,0.201799707191048,0,2.74804275804612,0.307240764308458,0,0.500547425135725,0,0,1.23087398947712,0.270455678475983,1.6653598399891,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0.568272293612826,0.47748896947538,0,0,0,0.281338832821026,0.333926115068718,1.15362711958732,0.422250816255987,0,0.276283915531148,1.25966373927138,0.20453736500431,0.123084805461069,0,0.629078458031288,0.358042349351218,0,0,0,0,0.969332746095218,0,0,1.30213880542617,0.174919999992391,0,0,1.017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| ||
|short_description=p6@TOR1AIP1 | |||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p6@TOR1AIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TOR1AIP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 47bp_to_ENST00000528443_5end |
EntrezGene: | TOR1AIP1 |
HGNC: | 29456 |
UniProt: | E9PKD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.91e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.91e-51 | 42 |
defensive cell | 1.68e-45 | 48 |
phagocyte | 1.68e-45 | 48 |
macrophage dendritic cell progenitor | 1.32e-38 | 61 |
leukocyte | 1.12e-37 | 136 |
granulocyte monocyte progenitor cell | 3.53e-36 | 67 |
monopoietic cell | 7.49e-36 | 59 |
monocyte | 7.49e-36 | 59 |
monoblast | 7.49e-36 | 59 |
promonocyte | 7.49e-36 | 59 |
hematopoietic stem cell | 1.40e-34 | 168 |
nongranular leukocyte | 1.98e-34 | 115 |
hematopoietic cell | 3.21e-33 | 177 |
myeloid leukocyte | 1.40e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 1.70e-32 | 120 |
hematopoietic oligopotent progenitor cell | 1.06e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-31 | 161 |
myeloid lineage restricted progenitor cell | 7.85e-31 | 66 |
myeloid cell | 2.41e-29 | 108 |
common myeloid progenitor | 2.41e-29 | 108 |
mesenchymal cell | 1.32e-14 | 354 |
connective tissue cell | 6.45e-14 | 361 |
motile cell | 3.80e-12 | 386 |
stem cell | 3.20e-10 | 441 |
multi fate stem cell | 3.74e-10 | 427 |
somatic stem cell | 9.97e-10 | 433 |
CD4-positive, alpha-beta T cell | 5.73e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.52e-32 | 76 |
bone element | 2.03e-30 | 82 |
hematopoietic system | 9.34e-28 | 98 |
blood island | 9.34e-28 | 98 |
skeletal element | 1.42e-26 | 90 |
immune system | 2.03e-25 | 93 |
hemolymphoid system | 6.26e-24 | 108 |
skeletal system | 1.20e-22 | 100 |
connective tissue | 5.54e-13 | 371 |
lateral plate mesoderm | 2.31e-10 | 203 |
musculoskeletal system | 1.51e-09 | 167 |