FFCP PHASE1:Hg19::chr1:160924623..160924635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142683 | |EntrezGene=142683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20599 | |HGNC=20599 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWU7 | |UniProt=Q8WWU7 | ||
|association_with_transcript=-34bp_to_ENST00000368029,NM_080878,uc001fxd.2,uc009wts.2,uc010pju.1_5end | |||
|cluster_id=chr1:160924623..160924635,- | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_3_at_ITLN2_5end | |||
|id=chr1:160924623..160924635,- | |||
|ontology_enrichment_celltype=CL:0002322!5.49e-35!5;CL:0000039!9.69e-17!7;CL:0000586!9.69e-17!7;CL:0000540!5.84e-11!6;CL:0000031!5.84e-11!6;CL:0000404!5.84e-11!6;CL:0000167!1.13e-08!1;CL:0000164!1.13e-08!1;CL:0000502!1.13e-08!1;CL:0000172!1.13e-08!1;CL:0000173!1.13e-08!1;CL:0002351!1.13e-08!1;CL:0000047!2.43e-08!8;CL:0000148!6.44e-07!10;CL:0000541!6.44e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.76e-39;5!CL:0000039;4.27e-29;7!CL:0000586;4.27e-29;7!CL:0000167;3.98e-14;1!CL:0000164;3.98e-14;1!CL:0000502;3.98e-14;1!CL:0000172;3.98e-14;1!CL:0000173;3.98e-14;1!CL:0002321;2.07e-13;15!CL:0000148;9.94e-12;10!CL:0000540;4.37e-09;6!CL:0000404;4.37e-09;6!CL:0000147;1.55e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.44e-39,5;CL:0000039,5.11e-29,7;CL:0000586,5.11e-29,7;CL:0000167,3.98e-14,1;CL:0000164,3.98e-14,1;CL:0000502,3.98e-14,1;CL:0000172,3.98e-14,1;CL:0000173,3.98e-14,1;CL:0002351,3.98e-14,1;CL:0000148,9.41e-12,10;CL:0000541,9.41e-12,10;CL:0000540,4.74e-09,6;CL:0000031,4.74e-09,6;CL:0000404,4.74e-09,6;CL:0000147,1.49e-08,14;CL:0000047,5.30e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.75e-20;10!UBERON:0005564;1.75e-20;10!CL:0002351;3.98e-14;1!CL:0000031;4.37e-09;6 | |||
|ontology_enrichment_disease=DOID:3095!3.21e-11!22;DOID:2994!3.21e-11!22;DOID:4430!1.13e-08!1;DOID:178!5.07e-08!1;DOID:326!5.07e-08!1;DOID:3978!5.07e-08!1;DOID:3394!5.07e-08!1;DOID:5844!5.07e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.36e-14;22!DOID:2994;2.36e-14;22!DOID:4430;3.98e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.53e-14,22;DOID:2994,2.53e-14,22;DOID:4430,3.98e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.14e-14!8;UBERON:0003135!1.05e-10!11;UBERON:0003101!7.02e-08!22;UBERON:0000079!7.02e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.64e-25;8!UBERON:0003135;1.19e-18;11!UBERON:0000922;4.05e-14;49!UBERON:0000991;6.73e-10;21!UBERON:0003101;1.86e-09;22!UBERON:0000079;1.86e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.92e-25,8;UBERON:0003135,1.33e-18,11;UBERON:0000991,7.14e-10,21;UBERON:0009196,7.14e-10,21;UBERON:0009117,7.14e-10,21;UBERON:0005564,7.14e-10,21;UBERON:0004176,1.96e-09,22;UBERON:0003101,1.96e-09,22;UBERON:0000079,1.96e-09,22 | |||
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|short_description=p3@ITLN2 | |||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p3@ITLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITLN2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -34bp_to_ENST00000368029, NM_080878, uc001fxd.2, uc009wts.2, uc010pju.1_5end |
EntrezGene: | ITLN2 |
HGNC: | 20599 |
UniProt: | Q8WWU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.44e-39 | 5 |
germ line cell | 5.11e-29 | 7 |
germ cell | 5.11e-29 | 7 |
peptide hormone secreting cell | 3.98e-14 | 1 |
enteroendocrine cell | 3.98e-14 | 1 |
type D enteroendocrine cell | 3.98e-14 | 1 |
somatostatin secreting cell | 3.98e-14 | 1 |
pancreatic D cell | 3.98e-14 | 1 |
progenitor cell of endocrine pancreas | 3.98e-14 | 1 |
melanocyte | 9.41e-12 | 10 |
melanoblast | 9.41e-12 | 10 |
neuron | 4.74e-09 | 6 |
neuroblast | 4.74e-09 | 6 |
electrically signaling cell | 4.74e-09 | 6 |
pigment cell | 1.49e-08 | 14 |
neuronal stem cell | 5.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.92e-25 | 8 |
male reproductive organ | 1.33e-18 | 11 |
gonad | 7.14e-10 | 21 |
indifferent external genitalia | 7.14e-10 | 21 |
indifferent gonad | 7.14e-10 | 21 |
gonad primordium | 7.14e-10 | 21 |
external genitalia | 1.96e-09 | 22 |
male organism | 1.96e-09 | 22 |
male reproductive system | 1.96e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.53e-14 | 22 |
germ cell cancer | 2.53e-14 | 22 |
somatostatinoma | 3.98e-14 | 1 |