FFCP PHASE1:Hg19::chr1:150208498..150208509,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:150208498..150208509,- to FFCP PHASE1:Hg19::chr1:150208498..150208509,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81611 | |EntrezGene=81611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16673 | |HGNC=16673 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTT0,B4E0I6,E9PEA6 | |UniProt=Q9BTT0,B4E0I6,E9PEA6 | ||
|association_with_transcript=0bp_to_ENST00000314136,NM_001136478,NM_030920,uc001etv.3,uc001etw.2,uc010pbv.1,uc010pbw.1_5end | |||
|cluster_id=chr1:150208498..150208509,- | |||
|description=CAGE_peak_7_at_ANP32E_5end | |||
|id=chr1:150208498..150208509,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.25e-08;82 | |||
|ontology_enrichment_disease=DOID:162!1.03e-22!235;DOID:14566!3.79e-22!239;DOID:0050687!4.43e-16!143;DOID:305!4.11e-13!106;DOID:0050686!1.93e-09!137;DOID:2531!8.36e-07!51;DOID:0060083!8.36e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.75e-22,235;DOID:14566,2.58e-21,239;DOID:0050687,6.32e-16,143;DOID:305,4.81e-13,106;DOID:0050686,5.27e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.53e-22!94;UBERON:0001016!2.53e-22!94;UBERON:0001017!1.14e-21!82;UBERON:0005743!2.43e-21!86;UBERON:0001049!1.17e-19!57;UBERON:0005068!1.17e-19!57;UBERON:0006241!1.17e-19!57;UBERON:0007135!1.17e-19!57;UBERON:0000955!4.31e-19!69;UBERON:0006238!4.31e-19!69;UBERON:0002616!2.27e-17!59;UBERON:0000924!3.15e-17!173;UBERON:0006601!3.15e-17!173;UBERON:0004121!6.76e-17!169;UBERON:0002780!3.56e-16!41;UBERON:0001890!3.56e-16!41;UBERON:0006240!3.56e-16!41;UBERON:0003080!2.41e-15!42;UBERON:0002346!4.70e-15!90;UBERON:0003075!7.61e-15!86;UBERON:0007284!7.61e-15!86;UBERON:0007023!1.27e-14!115;UBERON:0000153!2.07e-13!129;UBERON:0007811!2.07e-13!129;UBERON:0000033!5.12e-13!123;UBERON:0002020!2.08e-12!34;UBERON:0003528!2.08e-12!34;UBERON:0001893!2.11e-12!34;UBERON:0002791!5.59e-12!33;UBERON:0001869!1.92e-11!32;UBERON:0003056!1.06e-10!61;UBERON:0000956!4.29e-08!25;UBERON:0000203!4.29e-08!25;UBERON:0002619!2.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.08e-12;53!UBERON:0002616;2.08e-12;53!UBERON:0002780;3.82e-12;41!UBERON:0001890;3.82e-12;41!UBERON:0001893;2.33e-11;34!UBERON:0003528;4.00e-11;34!UBERON:0002020;4.00e-11;34!UBERON:0002791;6.68e-11;32!UBERON:0001869;8.82e-11;32!UBERON:0000955;1.86e-09;68!UBERON:0001017;3.53e-09;75!UBERON:0001016;8.34e-09;83!UBERON:0000956;3.19e-08;25!UBERON:0000203;3.19e-08;25!UBERON:0002619;2.14e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.84e-23,89;UBERON:0001017,1.65e-22,81;UBERON:0001049,1.56e-20,56;UBERON:0005068,1.56e-20,56;UBERON:0006241,1.56e-20,56;UBERON:0007135,1.56e-20,56;UBERON:0000073,2.66e-20,53;UBERON:0002616,2.66e-20,53;UBERON:0000955,4.71e-20,68;UBERON:0006238,4.71e-20,68;UBERON:0002780,1.35e-16,41;UBERON:0001890,1.35e-16,41;UBERON:0003080,1.35e-16,41;UBERON:0006240,1.35e-16,41;UBERON:0004121,7.75e-16,171;UBERON:0000924,7.75e-16,171;UBERON:0006601,7.75e-16,171;UBERON:0011216,1.49e-15,223;UBERON:0007023,2.48e-14,114;UBERON:0002346,1.35e-13,86;UBERON:0003075,2.27e-13,82;UBERON:0007284,2.27e-13,82;UBERON:0003528,1.01e-12,34;UBERON:0002020,1.01e-12,34;UBERON:0001893,1.03e-12,34;UBERON:0002791,9.18e-12,32;UBERON:0001869,1.00e-11,32;UBERON:0003056,2.33e-11,61;UBERON:0010371,2.34e-11,104;UBERON:0010314,3.32e-09,132;UBERON:0000956,2.79e-08,25;UBERON:0000203,2.79e-08,25;UBERON:0002619,1.79e-07,22 | |||
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| ||
|short_description=p7@ANP32E | |||
}} | }} |
Latest revision as of 21:42, 16 September 2015
Short description: | p7@ANP32E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ANP32E_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314136, NM_001136478, NM_030920, uc001etv.3, uc001etw.2, uc010pbv.1, uc010pbw.1_5end |
EntrezGene: | ANP32E |
HGNC: | 16673 |
UniProt: | Q9BTT0B4E0I6E9PEA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.84e-23 | 89 |
central nervous system | 1.65e-22 | 81 |
neural tube | 1.56e-20 | 56 |
neural rod | 1.56e-20 | 56 |
future spinal cord | 1.56e-20 | 56 |
neural keel | 1.56e-20 | 56 |
regional part of nervous system | 2.66e-20 | 53 |
regional part of brain | 2.66e-20 | 53 |
brain | 4.71e-20 | 68 |
future brain | 4.71e-20 | 68 |
regional part of forebrain | 1.35e-16 | 41 |
forebrain | 1.35e-16 | 41 |
anterior neural tube | 1.35e-16 | 41 |
future forebrain | 1.35e-16 | 41 |
ectoderm-derived structure | 7.75e-16 | 171 |
ectoderm | 7.75e-16 | 171 |
presumptive ectoderm | 7.75e-16 | 171 |
organ system subdivision | 1.49e-15 | 223 |
adult organism | 2.48e-14 | 114 |
neurectoderm | 1.35e-13 | 86 |
neural plate | 2.27e-13 | 82 |
presumptive neural plate | 2.27e-13 | 82 |
brain grey matter | 1.01e-12 | 34 |
gray matter | 1.01e-12 | 34 |
telencephalon | 1.03e-12 | 34 |
regional part of telencephalon | 9.18e-12 | 32 |
cerebral hemisphere | 1.00e-11 | 32 |
pre-chordal neural plate | 2.33e-11 | 61 |
ecto-epithelium | 2.34e-11 | 104 |
structure with developmental contribution from neural crest | 3.32e-09 | 132 |
cerebral cortex | 2.79e-08 | 25 |
pallium | 2.79e-08 | 25 |
regional part of cerebral cortex | 1.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.75e-22 | 235 |
disease of cellular proliferation | 2.58e-21 | 239 |
cell type cancer | 6.32e-16 | 143 |
carcinoma | 4.81e-13 | 106 |
organ system cancer | 5.27e-09 | 137 |