FFCP PHASE1:Hg19::chr1:111770278..111770289,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:111770278..111770289,+ to FFCP PHASE1:Hg19::chr1:111770278..111770289,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt=Q15782,A6NNY3 | |UniProt=Q15782,A6NNY3 | ||
|association_with_transcript=0bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end | |||
|cluster_id=chr1:111770278..111770289,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_9_at_CHI3L2_5end | |||
|id=chr1:111770278..111770289,+ | |||
|ontology_enrichment_celltype=CL:0000153!2.72e-08!9;CL:0000447!2.72e-08!9;CL:0000667!5.67e-07!6;CL:0000058!5.67e-07!6;CL:0000138!5.67e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.81e-19;9!CL:0000447;1.81e-19;9!CL:0000138;2.71e-19;6!CL:0002602;1.07e-14;2!CL:0000327;1.29e-11;15!CL:0002521;4.21e-10;3!CL:0000136;1.10e-08;13!CL:0000499;1.32e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.03e-19,9;CL:0000447,2.03e-19,9;CL:0000058,2.47e-19,6;CL:0000138,2.47e-19,6;CL:0002602,7.31e-15,2;CL:0000327,1.38e-11,15;CL:0002521,4.31e-10,3;CL:0000499,1.38e-08,28;CL:0000136,1.75e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.51e-08;1!UBERON:0010115;1.81e-08;1!UBERON:0008801;2.42e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.72e-08;1!DOID:0050177;4.72e-08;1!DOID:0050427;4.72e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.33e-08,1;DOID:0050177,3.33e-08,1;DOID:0050427,3.33e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.60e-23!115;UBERON:0001049!5.26e-14!57;UBERON:0005068!5.26e-14!57;UBERON:0006241!5.26e-14!57;UBERON:0007135!5.26e-14!57;UBERON:0001017!8.83e-12!82;UBERON:0005743!1.65e-11!86;UBERON:0003076!1.86e-10!15;UBERON:0003057!1.86e-10!15;UBERON:0003075!4.91e-10!86;UBERON:0007284!4.91e-10!86;UBERON:0003408!5.06e-10!10;UBERON:0002616!6.16e-10!59;UBERON:0000955!1.40e-09!69;UBERON:0006238!1.40e-09!69;UBERON:0000073!1.83e-09!94;UBERON:0001016!1.83e-09!94;UBERON:0001044!2.79e-09!6;UBERON:0003293!2.79e-09!6;UBERON:0003294!2.79e-09!6;UBERON:0010047!2.79e-09!6;UBERON:0000167!2.79e-09!6;UBERON:0002346!3.65e-09!90;UBERON:0005174!4.55e-08!5;UBERON:0001137!4.55e-08!5;UBERON:0000153!7.27e-08!129;UBERON:0007811!7.27e-08!129;UBERON:0001893!1.97e-07!34;UBERON:0002020!2.15e-07!34;UBERON:0003528!2.15e-07!34;UBERON:0004733!3.29e-07!12;UBERON:0002028!3.29e-07!12;UBERON:0007277!3.29e-07!12;UBERON:0000033!3.31e-07!123;UBERON:0002780!4.25e-07!41;UBERON:0001890!4.25e-07!41;UBERON:0006240!4.25e-07!41;UBERON:0002298!4.56e-07!8;UBERON:0002791!6.77e-07!33;UBERON:0000475!7.28e-07!365;UBERON:0003080!8.10e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.49e-15;2!UBERON:0006444;1.07e-14;2!UBERON:0001995;1.07e-14;2!UBERON:0004715;1.07e-14;2!UBERON:0004905;4.52e-14;8!UBERON:0000982;4.52e-14;8!UBERON:0004770;4.52e-14;8!UBERON:0011135;3.43e-13;5!UBERON:0002216;3.43e-13;5!UBERON:0011134;3.43e-13;5!UBERON:0002209;3.43e-13;5!UBERON:0002213;3.43e-13;5!UBERON:0007844;3.43e-13;5!UBERON:0011138;3.43e-13;5!UBERON:0001130;3.43e-13;5!UBERON:0001066;3.43e-13;5!UBERON:0001468;3.43e-13;5!UBERON:0001044;3.14e-11;6!UBERON:0003293;3.14e-11;6!UBERON:0003294;3.14e-11;6!UBERON:0010047;3.14e-11;6!UBERON:0003408;3.14e-11;6!UBERON:0000167;3.14e-11;6!UBERON:0002418;4.21e-10;3!UBERON:0004755;4.21e-10;3!UBERON:0002190;4.21e-10;3!UBERON:0001736;1.51e-08;1!UBERON:0002363;1.81e-08;1!UBERON:0001831;2.42e-08;1!UBERON:0001567;2.42e-08;1!UBERON:0002336;4.72e-08;1!UBERON:0002135;4.72e-08;1!UBERON:0011215;4.72e-08;1!UBERON:0001018;4.72e-08;1!UBERON:0002473;4.72e-08;1!UBERON:0005340;4.72e-08;1!UBERON:0003544;4.72e-08;1!UBERON:0005970;4.72e-08;1!UBERON:0002316;4.72e-08;1!UBERON:0001020;4.72e-08;1!UBERON:0002437;4.72e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.61e-15,2;UBERON:0006444,7.31e-15,2;UBERON:0001995,7.31e-15,2;UBERON:0004715,7.31e-15,2;UBERON:0004905,4.53e-14,8;UBERON:0000982,4.53e-14,8;UBERON:0004770,4.53e-14,8;UBERON:0011135,2.78e-13,5;UBERON:0002216,2.78e-13,5;UBERON:0011134,2.78e-13,5;UBERON:0002209,2.78e-13,5;UBERON:0002213,2.78e-13,5;UBERON:0005856,2.78e-13,5;UBERON:0005866,2.78e-13,5;UBERON:0005863,2.78e-13,5;UBERON:0007844,2.78e-13,5;UBERON:0011138,2.78e-13,5;UBERON:0001130,2.78e-13,5;UBERON:0001066,2.78e-13,5;UBERON:0001468,2.78e-13,5;UBERON:0001044,3.14e-11,6;UBERON:0003293,3.14e-11,6;UBERON:0003294,3.14e-11,6;UBERON:0010047,3.14e-11,6;UBERON:0000167,3.14e-11,6;UBERON:0002418,3.27e-10,3;UBERON:0004755,3.27e-10,3;UBERON:0002190,4.31e-10,3;UBERON:0001736,1.41e-08,1;UBERON:0006298,1.41e-08,1;UBERON:0002363,1.88e-08,1;UBERON:0007645,1.88e-08,1;UBERON:0007647,1.88e-08,1;UBERON:0010115,1.88e-08,1;UBERON:0001831,2.69e-08,1;UBERON:0001567,2.69e-08,1;UBERON:0008801,2.69e-08,1;UBERON:0002135,5.82e-08,1;UBERON:0002336,6.24e-08,1;UBERON:0011215,6.24e-08,1;UBERON:0001018,6.24e-08,1;UBERON:0002473,6.24e-08,1;UBERON:0005340,6.24e-08,1;UBERON:0003544,6.24e-08,1;UBERON:0005970,6.24e-08,1;UBERON:0002316,6.24e-08,1;UBERON:0001020,6.24e-08,1;UBERON:0002437,6.24e-08,1;UBERON:0003408,6.44e-07,10 | |||
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|short_description=p9@CHI3L2 | |||
}} | }} |
Latest revision as of 02:59, 16 September 2015
Short description: | p9@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CHI3L2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_ENST00000369748, NM_001025197, NM_004000, uc001eam.2, uc001ean.2_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | Q15782A6NNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.03e-19 | 9 |
carbohydrate secreting cell | 2.03e-19 | 9 |
chondroblast | 2.47e-19 | 6 |
chondrocyte | 2.47e-19 | 6 |
annulus pulposus cell | 7.31e-15 | 2 |
extracellular matrix secreting cell | 1.38e-11 | 15 |
subcutaneous fat cell | 4.31e-10 | 3 |
stromal cell | 1.38e-08 | 28 |
fat cell | 1.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.33e-08 | 1 |
monogenic disease | 3.33e-08 | 1 |
xeroderma pigmentosum | 3.33e-08 | 1 |