FFCP PHASE1:Hg19::chr1:110166628..110166644,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:110166628..110166644,+ to FFCP PHASE1:Hg19::chr1:110166628..110166644,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=271 | |EntrezGene=271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=469 | |HGNC=469 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_uc010ovs.1_5end | |||
|cluster_id=chr1:110166628..110166644,+ | |||
|description=CAGE_peak_9_at_AMPD2_5end | |||
|id=chr1:110166628..110166644,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.75e-13;13!CL:0000136;9.13e-09;13!CL:0002032;1.17e-08;1!CL:0000557;1.17e-08;1!CL:0000817;3.32e-08;1!CL:0000945;5.62e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.81e-12,14;CL:0000136,9.96e-08,15;CL:0000945,5.34e-07,24;CL:0000826,5.34e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-37!57;UBERON:0005068!1.28e-37!57;UBERON:0006241!1.28e-37!57;UBERON:0007135!1.28e-37!57;UBERON:0007023!1.77e-34!115;UBERON:0005743!7.45e-33!86;UBERON:0003075!3.92e-31!86;UBERON:0007284!3.92e-31!86;UBERON:0002780!1.34e-30!41;UBERON:0001890!1.34e-30!41;UBERON:0006240!1.34e-30!41;UBERON:0002616!2.41e-30!59;UBERON:0003080!1.29e-29!42;UBERON:0000073!2.57e-29!94;UBERON:0001016!2.57e-29!94;UBERON:0002346!5.29e-29!90;UBERON:0001017!1.12e-28!82;UBERON:0003056!2.37e-27!61;UBERON:0000955!7.65e-27!69;UBERON:0006238!7.65e-27!69;UBERON:0001893!2.59e-26!34;UBERON:0002020!5.77e-26!34;UBERON:0003528!5.77e-26!34;UBERON:0002791!3.52e-25!33;UBERON:0001869!3.72e-24!32;UBERON:0000153!6.88e-22!129;UBERON:0007811!6.88e-22!129;UBERON:0000033!1.97e-19!123;UBERON:0000956!6.53e-18!25;UBERON:0000203!6.53e-18!25;UBERON:0002619!6.02e-17!22;UBERON:0001950!1.30e-14!20;UBERON:0004121!7.53e-14!169;UBERON:0000924!3.76e-13!173;UBERON:0006601!3.76e-13!173;UBERON:0002420!2.75e-10!9;UBERON:0007245!2.75e-10!9;UBERON:0010009!2.75e-10!9;UBERON:0010011!2.75e-10!9;UBERON:0000454!2.75e-10!9;UBERON:0002308!1.23e-09!9;UBERON:0000125!1.23e-09!9;UBERON:0003076!4.44e-09!15;UBERON:0003057!4.44e-09!15;UBERON:0000200!7.58e-09!6;UBERON:0000349!3.61e-08!5;UBERON:0009663!1.18e-07!7;UBERON:0000369!6.48e-07!4;UBERON:0002435!6.48e-07!4;UBERON:0000204!6.48e-07!4;UBERON:0010082!6.48e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.92e-16;2!UBERON:0002757;9.92e-16;2!UBERON:0010134;9.92e-16;2!UBERON:0005408;9.92e-16;2!UBERON:0001899;9.92e-16;2!UBERON:0002370;1.03e-14;2!UBERON:0005058;1.03e-14;2!UBERON:0009113;1.03e-14;2!UBERON:0003296;2.69e-08;4!UBERON:0010133;2.69e-08;4!UBERON:0002784;2.69e-08;4!UBERON:0002581;3.32e-08;1!UBERON:0002902;3.32e-08;1!UBERON:0001874;3.32e-08;1!UBERON:0009899;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.98e-16,2;UBERON:0002757,9.98e-16,2;UBERON:0010134,9.98e-16,2;UBERON:0005408,9.98e-16,2;UBERON:0001899,9.98e-16,2;UBERON:0001874,2.50e-08,1;UBERON:0003296,2.69e-08,4;UBERON:0010133,2.69e-08,4;UBERON:0002784,2.69e-08,4;UBERON:0002581,3.83e-08,1;UBERON:0002902,6.24e-08,1;UBERON:0009899,6.24e-08,1;UBERON:0007023,8.77e-08,114;UBERON:0002370,9.14e-08,4;UBERON:0005058,9.14e-08,4;UBERON:0009113,9.14e-08,4;UBERON:0003295,9.14e-08,4;UBERON:0005562,9.14e-08,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.410623275218653,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0.182664153764634,0,1.09227722252426,1.77901850772711,0.426730222566507,0,0.574752439954483,1.32208974556972,0,0,1.17447437874188,0,0,0,2.10707267820062,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.889719378972363,0.802622484269139,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0.97364218096405,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0.512900250232778,0.328014645699706,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,1.44269212976445,0.213425530045242,0,0,0,0.211673582723883,0,0,2.51058146936511,0.156679895773023,0,0,0.321176150207399,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,0,0,0,0,0,0,0,1.03423011972439,0,0.347249989866585,0.885741385813839,0.60298219312704,0,0.110579259931225,0.295547618953547,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.831058409500782,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.569797163602908,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.821432273351958,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,3.26410682021684,1.7548292581589,1.83807346058077,1.31149052283922,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.887432412294818,0.558867626472451,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0.352675943690684,0,0.834979926253974,1.41696576325585,0.638535436228605,0.205116364240755,0,1.03735878696327,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.634158101939068,0,0,0,0,0,6.42842203053944,8.07080933325178,0,0,0,0,0,1.35939465953663,1.24968269769413,0,0,0.313972371402056,1.41404030924402,0,0.913158720509496,0,0,1.92986669276972,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0.563903507879121,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.517164979309476,0.213233981900981,0,1.16260037704811,1.36564371450887,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,1.00636896795513,0.320568492303233 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.410623275218653,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0.59675003159727,0.182664153764634,0,1.09227722252426,1.77901850772711,0.426730222566507,0,0.574752439954483,1.32208974556972,0,0,1.17447437874188,0,0,0,2.10707267820062,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.889719378972363,0.802622484269139,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0.97364218096405,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.522870902049801,0.512900250232778,0.328014645699706,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,1.44269212976445,0.213425530045242,0,0,0,0.211673582723883,0,0,2.51058146936511,0.156679895773023,0,0,0.321176150207399,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,0,0,0,0,0,0,0,1.03423011972439,0,0.347249989866585,0.885741385813839,0.60298219312704,0,0.110579259931225,0.295547618953547,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.831058409500782,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.569797163602908,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.821432273351958,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,3.26410682021684,1.7548292581589,1.83807346058077,1.31149052283922,0,0.886068179966986,0.610131324509816,0.3755727921195,0,0.887432412294818,0.558867626472451,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.394308725006267,0,0.352675943690684,0,0.834979926253974,1.41696576325585,0.638535436228605,0.205116364240755,0,1.03735878696327,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.634158101939068,0,0,0,0,0,6.42842203053944,8.07080933325178,0,0,0,0,0,1.35939465953663,1.24968269769413,0,0,0.313972371402056,1.41404030924402,0,0.913158720509496,0,0,1.92986669276972,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0.563903507879121,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.517164979309476,0.213233981900981,0,1.16260037704811,1.36564371450887,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,1.00636896795513,0.320568492303233 | ||
|short_description=p9@AMPD2 | |||
}} | }} |
Latest revision as of 22:35, 15 September 2015
Short description: | p9@AMPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AMPD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_uc010ovs.1_5end |
EntrezGene: | AMPD2 |
HGNC: | 469 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.81e-12 | 14 |
fat cell | 9.96e-08 | 15 |
lymphocyte of B lineage | 5.34e-07 | 24 |
pro-B cell | 5.34e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.98e-16 | 2 |
regional part of epithalamus | 9.98e-16 | 2 |
secretory circumventricular organ | 9.98e-16 | 2 |
circumventricular organ | 9.98e-16 | 2 |
epithalamus | 9.98e-16 | 2 |
putamen | 2.50e-08 | 1 |
gland of diencephalon | 2.69e-08 | 4 |
neuroendocrine gland | 2.69e-08 | 4 |
regional part of diencephalon | 2.69e-08 | 4 |
postcentral gyrus | 3.83e-08 | 1 |
occipital pole | 6.24e-08 | 1 |
pole of cerebral hemisphere | 6.24e-08 | 1 |
adult organism | 8.77e-08 | 114 |
thymus | 9.14e-08 | 4 |
hemolymphoid system gland | 9.14e-08 | 4 |
thymic region | 9.14e-08 | 4 |
pharyngeal gland | 9.14e-08 | 4 |
thymus primordium | 9.14e-08 | 4 |