FFCP PHASE1:Hg19::chr19:7990008..7990044,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:7990008..7990044,- to FFCP PHASE1:Hg19::chr19:7990008..7990044,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=404217 | |EntrezGene=404217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31108 | |HGNC=31108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=289bp_to_BC024148_5end | |||
|cluster_id=chr19:7990008..7990044,- | |||
|coexpression_cluster_id=C2506 | |||
|description=CAGE_peak_4_at_CTXN1_5end | |||
|id=chr19:7990008..7990044,- | |||
|ontology_enrichment_celltype=CL:0000133!2.83e-09!59;CL:0002319!2.13e-08!25;CL:0000066!5.42e-08!254;CL:0000221!4.32e-07!71;CL:0002321!4.92e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.56e-09;6!CL:0000404;1.56e-09;6!CL:0002319;1.29e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.50e-12,8;CL:0000540,2.26e-09,6;CL:0000031,2.26e-09,6;CL:0000404,2.26e-09,6;CL:0002319,1.53e-08,25;CL:0000133,3.68e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.56e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.34e-22!86;UBERON:0001017!1.28e-21!82;UBERON:0000073!9.69e-20!94;UBERON:0001016!9.69e-20!94;UBERON:0001893!2.05e-19!34;UBERON:0001869!3.01e-19!32;UBERON:0002020!3.05e-19!34;UBERON:0003528!3.05e-19!34;UBERON:0002791!7.51e-19!33;UBERON:0002780!7.91e-17!41;UBERON:0001890!7.91e-17!41;UBERON:0006240!7.91e-17!41;UBERON:0000955!8.33e-17!69;UBERON:0006238!8.33e-17!69;UBERON:0002346!3.81e-16!90;UBERON:0003080!5.08e-16!42;UBERON:0003056!1.71e-15!61;UBERON:0001049!4.85e-15!57;UBERON:0005068!4.85e-15!57;UBERON:0006241!4.85e-15!57;UBERON:0007135!4.85e-15!57;UBERON:0000956!6.67e-15!25;UBERON:0000203!6.67e-15!25;UBERON:0002616!1.02e-14!59;UBERON:0003075!1.25e-14!86;UBERON:0007284!1.25e-14!86;UBERON:0002619!1.27e-13!22;UBERON:0000924!3.92e-13!173;UBERON:0006601!3.92e-13!173;UBERON:0000033!1.07e-12!123;UBERON:0000477!1.13e-12!286;UBERON:0001950!3.96e-12!20;UBERON:0004121!6.25e-12!169;UBERON:0000483!2.20e-11!309;UBERON:0000153!2.33e-11!129;UBERON:0007811!2.33e-11!129;UBERON:0000119!4.10e-11!312;UBERON:0004111!3.15e-10!241;UBERON:0000025!3.42e-10!194;UBERON:0000922!8.57e-09!612;UBERON:0000064!2.47e-08!219;UBERON:0000481!4.67e-08!347;UBERON:0003064!1.17e-07!37;UBERON:0002050!1.44e-07!605;UBERON:0005423!1.44e-07!605;UBERON:0000923!2.09e-07!604;UBERON:0005291!2.09e-07!604;UBERON:0006598!2.09e-07!604;UBERON:0002532!2.09e-07!604;UBERON:0000468!3.55e-07!659;UBERON:0002420!6.51e-07!9;UBERON:0007245!6.51e-07!9;UBERON:0010009!6.51e-07!9;UBERON:0010011!6.51e-07!9;UBERON:0000454!6.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.72e-38;32!UBERON:0002791;1.15e-35;32!UBERON:0001893;3.27e-35;34!UBERON:0000956;3.91e-33;25!UBERON:0000203;3.91e-33;25!UBERON:0003528;1.92e-32;34!UBERON:0002020;1.92e-32;34!UBERON:0002619;3.30e-31;22!UBERON:0001950;3.81e-27;20!UBERON:0002780;3.36e-25;41!UBERON:0001890;3.36e-25;41!UBERON:0000073;2.49e-14;53!UBERON:0002616;2.49e-14;53!UBERON:0001871;9.60e-12;6!UBERON:0000349;1.52e-11;5!UBERON:0000955;1.57e-11;68!UBERON:0002420;2.24e-11;9!UBERON:0007245;2.24e-11;9!UBERON:0010009;2.24e-11;9!UBERON:0010011;2.24e-11;9!UBERON:0000454;2.24e-11;9!UBERON:0001872;4.07e-11;5!UBERON:0001017;1.06e-10;75!UBERON:0000369;2.33e-09;4!UBERON:0002435;2.33e-09;4!UBERON:0000204;2.33e-09;4!UBERON:0000200;5.12e-09;6!UBERON:0001016;1.51e-08;83!UBERON:0005383;9.07e-08;3!UBERON:0005382;9.07e-08;3!UBERON:0009663;1.09e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.47e-43,32;UBERON:0001893,8.15e-40,34;UBERON:0002791,1.07e-39,32;UBERON:0003528,5.92e-37,34;UBERON:0002020,5.92e-37,34;UBERON:0002780,1.36e-34,41;UBERON:0001890,1.36e-34,41;UBERON:0003080,1.36e-34,41;UBERON:0006240,1.36e-34,41;UBERON:0000956,3.07e-33,25;UBERON:0000203,3.07e-33,25;UBERON:0002619,2.45e-31,22;UBERON:0001017,4.43e-30,81;UBERON:0003056,9.77e-28,61;UBERON:0001950,2.92e-27,20;UBERON:0001016,5.42e-26,89;UBERON:0000073,5.64e-25,53;UBERON:0002616,5.64e-25,53;UBERON:0001049,3.26e-23,56;UBERON:0005068,3.26e-23,56;UBERON:0006241,3.26e-23,56;UBERON:0007135,3.26e-23,56;UBERON:0000955,3.33e-22,68;UBERON:0006238,3.33e-22,68;UBERON:0002346,1.05e-19,86;UBERON:0003075,2.56e-18,82;UBERON:0007284,2.56e-18,82;UBERON:0004121,6.90e-15,171;UBERON:0000924,6.90e-15,171;UBERON:0006601,6.90e-15,171;UBERON:0010371,9.73e-15,104;UBERON:0010314,3.17e-13,132;UBERON:0000349,7.85e-12,5;UBERON:0001871,8.56e-12,6;UBERON:0002420,1.01e-11,9;UBERON:0007245,1.01e-11,9;UBERON:0010009,1.01e-11,9;UBERON:0010011,1.01e-11,9;UBERON:0000454,1.01e-11,9;UBERON:0000025,1.82e-11,192;UBERON:0001872,3.52e-11,5;UBERON:0000369,9.65e-10,4;UBERON:0002435,9.65e-10,4;UBERON:0000204,9.65e-10,4;UBERON:0010082,9.65e-10,4;UBERON:0007023,4.67e-09,114;UBERON:0000200,7.50e-09,6;UBERON:0011216,3.45e-08,223;UBERON:0004111,4.83e-08,240;UBERON:0009663,5.82e-08,7;UBERON:0005383,6.18e-08,3;UBERON:0005382,6.18e-08,3;UBERON:0000483,4.91e-07,306;UBERON:0005423,5.29e-07,581;UBERON:0000922,5.77e-07,592;UBERON:0000119,7.55e-07,309 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.246242116153576,0.816002764977012,0.940364164434263,0.286235987131057,1.23186982565596,2.51085279189606,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0.378139268656271,2.66075276955077,1.58102614247627,0.72038491523742,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,2.51699661725944,5.50236083880135,0.417989933073621,0.775250277507987,0.35576626268671,0.33472061276467,0.805658634218294,0,1.70843440283719,0,8.1014194788176,0.357198913136319,0.44905874525234,0.225222960966644,0,0,1.64881569537367,0,0,0,0,0.12663051166458,0,0.286836620748814,0,2.24271040056923,0,3.20667812942308,0,0.269421344139376,0,0,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0.408308342509787,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.875829639103749,0,0,0.612975591598039,0.751190294532984,0.226864366320042,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.609868530647977,0.530119073285941,0.929551542956147,1.24393266018445,0.504641701751257,0.36497735907583,0,0,0,0,0,0.591534000199219,0.842923450390509,0.723033089650446,0.882351781859152,1.08939722046203,0.237270619111097,0.269662616320329,0.196221465125346,1.15424147083917,0,4.20725321410337,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0.658501712451753,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.719792448923265,0.300343057843917,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,1.79951384127703,0,0,0,0.479249710983165,2.29723871668228,0,0,0.410952645100767,0,0,0,0,0,1.01637849688985,1.30139853857622,3.09315525111078,4.18790663335872,5.74144876487847,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,1.03985430765404,1.60586089917446,0.157702415033935,0.468565659970853,0,0,2.0694614258501,0,0,0.260650843404249,0.391602314925481,0.686286847621712,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,1.12597744800525,0,0.154209693802656,0,0,0,0,0.483437798366489,2.00506470303285,0.920809889358963,0.459257792658427,0.182091168006717,0.786746489756545,0.451199612907412,0.770153371044148,0.784349769176855,1.46139224653261,0.527758144464379,0,0.850468526382578,0.431831832204279,4.62681758070868,0.270946437543853,3.01013864312912,0,1.66215201785745,0.447749509444357,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0.824125183365091,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0.929691098594572,0,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.545999645631943,0.707027159768564,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.202910376962704,0,1.40847801266121,0,0,0.35667105148125,0.354761064070598,0.844430541190656,0,0,1.04980416073495,0,0.670302275535787,0,0,1.72202149068492,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0.735120647943095,0.185803175125719,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0.36408156524854,0,0.568272293612826,0,0,0,2.98244294329889,4.22008249231538,0,0,0.422250816255987,0.19924798825107,0,0.755798243562828,0,0,0,0.0898683511473268,0,0,0.493217028184668,0,0,8.72399471485697,3.15411533750294,0,0.260427761085233,0.262379999988587,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0.583209226766509,0.868124974666461,1.77148277162768,12.9038189329187,0,0,0,3.51016635446356,0.10893846351899,0,0.769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0,0.676786981851542,0,0.167821586975843,0,0,0.632994193584081,0.652931232636591,0,0,0.995261931078505,0,0.611030144933625,0,0,0.104421949505455,0.269604531922708,0,4.45102446878144,0,0,0.485560759068186,1.18375320854817,0,6.1214552326098,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0.970722711091971,2.08271686002157,0.0979923974143777,0.0870592065804026,1.04836000945218,0.171986032471617,0.677294319023596,0.511625219603299,0.985385484638511,0.09698901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| ||
|short_description=p4@CTXN1 | |||
}} | }} |
Latest revision as of 22:57, 24 September 2015
Short description: | p4@CTXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTXN1_5end |
Coexpression cluster: | C2506_putamen_caudate_nucleus_temporal_amygdala_insula_frontal |
Association with transcript: | 289bp_to_BC024148_5end |
EntrezGene: | CTXN1 |
HGNC: | 31108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.50e-12 | 8 |
neuron | 2.26e-09 | 6 |
neuroblast | 2.26e-09 | 6 |
electrically signaling cell | 2.26e-09 | 6 |
neural cell | 1.53e-08 | 25 |
neurectodermal cell | 3.68e-08 | 59 |