FFCP PHASE1:Hg19::chr19:51628330..51628379,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:51628330..51628379,+ to FFCP PHASE1:Hg19::chr19:51628330..51628379,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27180 | |EntrezGene=27180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10878 | |HGNC=10878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_DQ892476,DQ895688_5end | |||
|cluster_id=chr19:51628330..51628379,+ | |||
|coexpression_cluster_id=C847 | |||
|description=CAGE_peak_1_at_SIGLEC9_5end | |||
|id=chr19:51628330..51628379,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.09e-50!76;CL:0000557!1.74e-43!71;CL:0000839!2.76e-43!70;CL:0002194!3.86e-42!63;CL:0000576!3.86e-42!63;CL:0000040!3.86e-42!63;CL:0000559!3.86e-42!63;CL:0002009!2.75e-41!65;CL:0002057!3.02e-41!42;CL:0000860!3.73e-37!45;CL:0000738!8.93e-33!140;CL:0000763!3.57e-29!112;CL:0000049!3.57e-29!112;CL:0002031!2.48e-28!124;CL:0002087!4.23e-28!119;CL:0000037!2.05e-23!172;CL:0000566!2.05e-23!172;CL:0002032!1.90e-22!165;CL:0000837!1.90e-22!165;CL:0000988!6.11e-21!182;CL:0002393!3.30e-09!9;CL:0002397!3.30e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.54e-39;39!CL:0000234;9.54e-39;39!CL:0000860;1.31e-38;33!CL:0002057;1.31e-38;33!CL:0000576;2.19e-33;48!CL:0000766;1.47e-28;69!CL:0000763;7.61e-12;100!CL:0000235;3.13e-09;6!CL:0002087;5.47e-09;104!CL:0000738;1.47e-08;136!CL:0002393;5.64e-08;6!CL:0002397;5.64e-08;6!CL:0000094;9.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.63e-67,72;CL:0000473,1.21e-60,48;CL:0000234,1.21e-60,48;CL:0002194,6.86e-59,59;CL:0000576,6.86e-59,59;CL:0000040,6.86e-59,59;CL:0000559,6.86e-59,59;CL:0000839,7.77e-59,66;CL:0000557,1.25e-57,67;CL:0002009,2.81e-56,61;CL:0000860,1.42e-52,42;CL:0002057,1.42e-52,42;CL:0000763,2.89e-39,108;CL:0000049,2.89e-39,108;CL:0000738,1.08e-33,136;CL:0002087,1.20e-29,115;CL:0002031,1.35e-28,120;CL:0000037,3.41e-24,168;CL:0002032,1.96e-23,161;CL:0000837,1.96e-23,161;CL:0000988,1.01e-21,177;CL:0002393,2.26e-11,9;CL:0002397,2.26e-11,9;CL:0000235,3.21e-09,6;CL:0000094,9.11e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-37;42!CL:0000049;7.47e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-55!115;UBERON:0002390!7.09e-43!102;UBERON:0003061!7.09e-43!102;UBERON:0002193!1.06e-38!112;UBERON:0002371!1.21e-35!80;UBERON:0001474!2.26e-31!86;UBERON:0002405!1.38e-28!115;UBERON:0004765!6.57e-24!101;UBERON:0001434!6.57e-24!101;UBERON:0001049!2.40e-22!57;UBERON:0005068!2.40e-22!57;UBERON:0006241!2.40e-22!57;UBERON:0007135!2.40e-22!57;UBERON:0003080!1.43e-19!42;UBERON:0002780!7.18e-19!41;UBERON:0001890!7.18e-19!41;UBERON:0006240!7.18e-19!41;UBERON:0002616!3.21e-18!59;UBERON:0001017!1.20e-15!82;UBERON:0000955!1.32e-15!69;UBERON:0006238!1.32e-15!69;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0001893!3.06e-15!34;UBERON:0003075!4.70e-15!86;UBERON:0007284!4.70e-15!86;UBERON:0005743!7.05e-15!86;UBERON:0002791!8.61e-15!33;UBERON:0001869!6.06e-14!32;UBERON:0003081!7.17e-14!216;UBERON:0002346!1.27e-13!90;UBERON:0000073!1.24e-12!94;UBERON:0001016!1.24e-12!94;UBERON:0002619!4.39e-12!22;UBERON:0003056!1.35e-11!61;UBERON:0001950!1.02e-10!20;UBERON:0000062!6.03e-10!511;UBERON:0000956!6.93e-10!25;UBERON:0000203!6.93e-10!25;UBERON:0002204!6.56e-09!167;UBERON:0002308!1.36e-07!9;UBERON:0000125!1.36e-07!9;UBERON:0002420!1.49e-07!9;UBERON:0007245!1.49e-07!9;UBERON:0010009!1.49e-07!9;UBERON:0010011!1.49e-07!9;UBERON:0000454!1.49e-07!9;UBERON:0000178!2.34e-07!15;UBERON:0000179!2.34e-07!15;UBERON:0000463!2.34e-07!15;UBERON:0002298!2.79e-07!8;UBERON:0000153!5.72e-07!129;UBERON:0007811!5.72e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.60e-13;34!UBERON:0002020;4.60e-13;34!UBERON:0002791;9.97e-13;32!UBERON:0001893;1.59e-12;34!UBERON:0002780;1.73e-12;41!UBERON:0001890;1.73e-12;41!UBERON:0001869;3.06e-12;32!UBERON:0007023;5.00e-11;114!UBERON:0002619;1.77e-10;22!UBERON:0000073;2.18e-10;53!UBERON:0002616;2.18e-10;53!UBERON:0000178;1.93e-09;15!UBERON:0000179;1.93e-09;15!UBERON:0000463;1.93e-09;15!UBERON:0000125;2.71e-09;9!UBERON:0002308;2.71e-09;9!UBERON:0002420;3.64e-09;9!UBERON:0007245;3.64e-09;9!UBERON:0010009;3.64e-09;9!UBERON:0010011;3.64e-09;9!UBERON:0000454;3.64e-09;9!UBERON:0001950;7.04e-09;20!UBERON:0000956;1.01e-08;25!UBERON:0000203;1.01e-08;25!UBERON:0009663;2.05e-07;7!UBERON:0002298;5.05e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.08e-57,98;UBERON:0003061,7.08e-57,98;UBERON:0002193,3.21e-52,108;UBERON:0002371,3.39e-48,76;UBERON:0001474,4.50e-43,82;UBERON:0002405,4.63e-43,93;UBERON:0007023,1.91e-41,114;UBERON:0004765,2.51e-37,90;UBERON:0001434,1.79e-31,100;UBERON:0003081,9.47e-23,203;UBERON:0001049,8.37e-21,56;UBERON:0005068,8.37e-21,56;UBERON:0006241,8.37e-21,56;UBERON:0007135,8.37e-21,56;UBERON:0000073,1.77e-18,53;UBERON:0002616,1.77e-18,53;UBERON:0002780,2.72e-17,41;UBERON:0001890,2.72e-17,41;UBERON:0003080,2.72e-17,41;UBERON:0006240,2.72e-17,41;UBERON:0003528,2.06e-15,34;UBERON:0002020,2.06e-15,34;UBERON:0001893,4.79e-15,34;UBERON:0003075,2.12e-14,82;UBERON:0007284,2.12e-14,82;UBERON:0002791,8.99e-14,32;UBERON:0001017,9.39e-14,81;UBERON:0001869,1.73e-13,32;UBERON:0000955,1.73e-13,68;UBERON:0006238,1.73e-13,68;UBERON:0002346,3.77e-13,86;UBERON:0002050,3.43e-12,564;UBERON:0000923,3.92e-12,560;UBERON:0010316,3.92e-12,560;UBERON:0005291,3.92e-12,560;UBERON:0006598,3.92e-12,560;UBERON:0010317,3.92e-12,560;UBERON:0002532,3.92e-12,560;UBERON:0001016,5.84e-12,89;UBERON:0002204,1.06e-11,167;UBERON:0005423,1.36e-11,581;UBERON:0000922,4.73e-11,592;UBERON:0002619,1.99e-10,22;UBERON:0003056,2.43e-10,61;UBERON:0000178,2.02e-09,15;UBERON:0000179,2.02e-09,15;UBERON:0000463,2.02e-09,15;UBERON:0000125,2.64e-09,9;UBERON:0002308,2.64e-09,9;UBERON:0000926,2.97e-09,315;UBERON:0004120,2.97e-09,315;UBERON:0006603,2.97e-09,315;UBERON:0002420,2.98e-09,9;UBERON:0007245,2.98e-09,9;UBERON:0010009,2.98e-09,9;UBERON:0010011,2.98e-09,9;UBERON:0000454,2.98e-09,9;UBERON:0000479,7.52e-09,773;UBERON:0010371,7.57e-09,104;UBERON:0001950,7.73e-09,20;UBERON:0000956,1.12e-08,25;UBERON:0000203,1.12e-08,25;UBERON:0009663,1.83e-07,7;UBERON:0010314,2.90e-07,132;UBERON:0002298,5.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.0706351847777,6.34746105595912,0,0,0,0,0,0,6.64794490238253,7.62068900386538,6.72733699219141,28.4372652284704,28.8265362756892,33.4848237924443,69.7911546141911,81.243327893094,88.3005982723651,49.9722429347222,47.6954750105318,40.8812409581537,12.9461576544968,27.6653563051429,12.533558184095,11.721353145045,12.9096936716765,23.0225027210381,55.3432478255258,63.5871329634781,34.8321400889881,24.7927952820431,34.339405897142,19.8194508997703,19.791078011203,29.5206213280015,25.9997097824943,21.1852744198866,33.4757282567772,18.6846674698673,18.592401228999,17.7304192262868,16.2891633528837,12.7133895553007,19.8869923433285,18.0383560841304,20.9142733448822,17.2209482971685,18.6596194502455,18.3095668768787,21.3251187834939,25.7160938715328,13.9656244433212,14.1230840811354,16.6224379925817,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.768547918354051,0.260118695119756,0,0,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0,0,0.253019692019503,0.637130828648193,0,0,1.50575119077773,2.43174561193395,1.24930726552346,2.36777252044017,1.64225599384209,0.604820229674197,0,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,1.30979075497713,0,0,6.49094787309367,6.44280028007289,11.833258486179,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,34.4703808522356,15.4442814991897,30.4693882691893,0,0,0,0,0,0,26.111151608485,9.42118243941519,1.4512968087854,0.432359860250884,2.01987893482208,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,35.2708963859452,34.1534822173846,40.058448501776,0,0,0,0,0,0,0,1.77327684181734,0.431255149719035,0.898401253958239,0,0,0,0.837581326671744,0,0,8.97484377612075,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,5.58273670531796,4.31428401637234,5.76328812138599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32772248920434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,3.04468565539302,6.117097657139,11.9625909306574,4.52640373369799,10.2840568271549,7.78167973431261,5.40031437238115,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,2.12923118845163,0,0,0,0,0.781552381608161,1.9488432172667,0,0,0,0,0,7.17890078432281,0,0.111443384277478,0,0.47748896947538,0.296964680832639,0,4.97073823883149,5.62677665642051,0,0,0,2.59022384726391,1.10513566212459,0,0,0,0,0,0,0,1.38100767891707,4.7896618469388,0,0.969332746095218,3.6179558283122,1.99613798001194,0,0,5.79999660347835,0,0,0,0,0,0,5.31444831488303,2.77371808838438,0,0.552896299656123,0,1.31631238292384,0,0,1.07730361905316,0,0,0,0,0,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21143911258348,0.611030144933625,0,0,0,3.37005664903385,0,1.1713222286267,0,0,0,0,2.41981432097328,0.61214552326098,5.37085926842148,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0.775912131907355,0,1.35588444468319,0,0,1.01297273529406,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,11.3631464480354,0,0,0,1.95497680890578,1.3749625440701,2.15361907373044,0.798716001995964,3.004582336956,2.23171457441873,1.14211903227435,0,0,0,0,0,0,0,7.15706720828373,4.494712401682,0,0,0,0.2249738915515,0,0.728994679896296,0,3.54625682846392,1.62609223218494,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,3.81035807563014,10.6005511129777,5.17131825446202,7.00832789236257,0,0,5.33937062838473,2.67247318669432,2.07119527673598,10.419486458051,0,0,0,0,0,0,0,0,2.65820453990096,3.53876168215693,3.3801551290755,7.45431954397093,8.20874981372707,4.78142302648653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56252839300712,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60573062741149,2.8339315265117,4.94864963077169,1.23069818544453,1.00828678488687,1.1756732918917,0.807378228159255,2.85538840518309,0,0,0,0,0,0,0,2.25630985047772,0,0.781514011233092,0,0,0,1.35075169236789,2.34323429584154,3.9270491335225,1.64881106504158,0,1.64477330057155,0,0,0,2.14280734351315,1.68141861109412,0.606965604236632,0.91064876540519,1.50794029276486,0,0,2.51488012014277,0.460409414939944,0,0,1.41287567130925,3.77077415798405,0,0.913158720509496,0,0,1.21510125100316,0,0,0,0,0,0,0,0.860454717640555,0,0,0.42338705019092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| ||
|short_description=p1@SIGLEC9 | |||
}} | }} |
Latest revision as of 14:15, 19 September 2015
Short description: | p1@SIGLEC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIGLEC9_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 26bp_to_DQ892476, DQ895688_5end |
EntrezGene: | SIGLEC9 |
HGNC: | 10878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.63e-67 | 72 |
defensive cell | 1.21e-60 | 48 |
phagocyte | 1.21e-60 | 48 |
monopoietic cell | 6.86e-59 | 59 |
monocyte | 6.86e-59 | 59 |
monoblast | 6.86e-59 | 59 |
promonocyte | 6.86e-59 | 59 |
myeloid lineage restricted progenitor cell | 7.77e-59 | 66 |
granulocyte monocyte progenitor cell | 1.25e-57 | 67 |
macrophage dendritic cell progenitor | 2.81e-56 | 61 |
classical monocyte | 1.42e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-52 | 42 |
myeloid cell | 2.89e-39 | 108 |
common myeloid progenitor | 2.89e-39 | 108 |
leukocyte | 1.08e-33 | 136 |
nongranular leukocyte | 1.20e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 1.35e-28 | 120 |
hematopoietic stem cell | 3.41e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.96e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-23 | 161 |
hematopoietic cell | 1.01e-21 | 177 |
intermediate monocyte | 2.26e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-11 | 9 |
macrophage | 3.21e-09 | 6 |
granulocyte | 9.11e-07 | 8 |