FFCP PHASE1:Hg19::chr19:41859489..41859492,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41859489..41859492,- to FFCP PHASE1:Hg19::chr19:41859489..41859492,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=323bp_to_uc002oqh.1_5end | |||
|cluster_id=chr19:41859489..41859492,- | |||
|description=CAGE_peak_11_at_TGFB1_5end | |||
|id=chr19:41859489..41859492,- | |||
|ontology_enrichment_celltype=CL:0002371!3.49e-13!591;CL:0000763!2.77e-11!112;CL:0000049!2.77e-11!112;CL:0000012!2.01e-10!682;CL:0000144!3.22e-10!625;CL:0000034!3.82e-10!444;CL:0000048!4.46e-10!430;CL:0000723!5.15e-10!436;CL:0002320!1.21e-09!365;CL:0000548!1.58e-09!679;CL:0000004!1.58e-09!679;CL:0000255!1.58e-09!679;CL:0000134!2.31e-09!358;CL:0000115!3.47e-09!35;CL:0002139!7.08e-09!24;CL:0000003!1.30e-08!722;CL:0002057!1.43e-08!42;CL:0000557!2.59e-08!71;CL:0000988!8.24e-08!182;CL:0002078!8.48e-08!44;CL:0000219!1.23e-07!390;CL:0000063!1.30e-07!578;CL:0000071!1.32e-07!18;CL:0002546!1.32e-07!18;CL:0000860!1.55e-07!45;CL:0002009!2.45e-07!65;CL:0000839!3.32e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.81e-08;24!CL:0000860;2.72e-08;33!CL:0002057;2.72e-08;33!CL:0000115;3.39e-08;36!CL:0000071;5.56e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.15e-13,108;CL:0000049,1.15e-13,108;CL:0000034,1.73e-10,441;CL:0000048,1.81e-10,427;CL:0000115,1.94e-10,36;CL:0000723,3.11e-10,433;CL:0002320,4.26e-10,361;CL:0000134,5.46e-10,354;CL:0000557,2.73e-09,67;CL:0000988,3.84e-09,177;CL:0002139,5.16e-09,24;CL:0000071,1.21e-08,18;CL:0002546,1.21e-08,18;CL:0000860,1.41e-08,42;CL:0002057,1.41e-08,42;CL:0000219,1.51e-08,386;CL:0000766,3.19e-08,72;CL:0000839,4.10e-08,66;CL:0002078,4.83e-08,45;CL:0000473,1.05e-07,48;CL:0000234,1.05e-07,48;CL:0000037,1.18e-07,168;CL:0002009,1.28e-07,61;CL:0002194,8.70e-07,59;CL:0000576,8.70e-07,59;CL:0000040,8.70e-07,59;CL:0000559,8.70e-07,59;CL:0002032,9.40e-07,161;CL:0000837,9.40e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002546;5.56e-08;18 | |||
|ontology_enrichment_disease=DOID:8692!2.68e-09!31;DOID:1240!8.22e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.38e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.23e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.61e-14!216;UBERON:0004535!2.68e-11!110;UBERON:0002384!1.35e-10!375;UBERON:0002193!2.08e-10!112;UBERON:0001009!2.91e-10!113;UBERON:0002049!9.46e-10!79;UBERON:0007798!9.46e-10!79;UBERON:0000055!4.48e-09!69;UBERON:0001474!9.58e-09!86;UBERON:0002390!2.40e-08!102;UBERON:0003061!2.40e-08!102;UBERON:0002371!4.09e-08!80;UBERON:0002405!5.01e-08!115;UBERON:0001986!1.32e-07!18;UBERON:0004638!1.32e-07!18;UBERON:0004852!1.32e-07!18;UBERON:0004872!4.35e-07!84;UBERON:0001981!4.50e-07!60;UBERON:0007500!4.50e-07!60;UBERON:0004537!4.50e-07!60;UBERON:0006965!4.50e-07!60;UBERON:0004765!6.47e-07!101;UBERON:0001434!6.47e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.56e-08;18!UBERON:0001986;5.56e-08;18!UBERON:0004852;5.56e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.90e-18,203;UBERON:0002384,1.51e-10,371;UBERON:0001474,1.69e-10,82;UBERON:0002405,7.44e-10,93;UBERON:0000055,8.74e-10,68;UBERON:0004535,1.17e-09,109;UBERON:0002371,1.23e-09,76;UBERON:0002193,1.92e-09,108;UBERON:0002049,3.40e-09,78;UBERON:0007798,3.40e-09,78;UBERON:0001009,5.74e-09,112;UBERON:0004872,7.58e-09,83;UBERON:0004638,1.21e-08,18;UBERON:0001986,1.21e-08,18;UBERON:0004852,1.21e-08,18;UBERON:0007500,1.99e-08,59;UBERON:0001981,1.99e-08,59;UBERON:0004537,1.99e-08,59;UBERON:0006965,1.99e-08,59;UBERON:0004765,2.42e-08,90;UBERON:0002390,6.03e-08,98;UBERON:0003061,6.03e-08,98;UBERON:0001434,1.10e-07,100;UBERON:0000926,7.01e-07,315;UBERON:0004120,7.01e-07,315;UBERON:0006603,7.01e-07,315 | |||
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|short_description=p11@TGFB1 | |||
}} | }} |
Latest revision as of 05:21, 18 September 2015
Short description: | p11@TGFB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TGFB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 323bp_to_uc002oqh.1_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.90e-18 | 203 |
connective tissue | 1.51e-10 | 371 |
bone element | 1.69e-10 | 82 |
immune system | 7.44e-10 | 93 |
vessel | 8.74e-10 | 68 |
cardiovascular system | 1.17e-09 | 109 |
bone marrow | 1.23e-09 | 76 |
hemolymphoid system | 1.92e-09 | 108 |
vasculature | 3.40e-09 | 78 |
vascular system | 3.40e-09 | 78 |
circulatory system | 5.74e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 7.58e-09 | 83 |
blood vessel endothelium | 1.21e-08 | 18 |
endothelium | 1.21e-08 | 18 |
cardiovascular system endothelium | 1.21e-08 | 18 |
epithelial tube open at both ends | 1.99e-08 | 59 |
blood vessel | 1.99e-08 | 59 |
blood vasculature | 1.99e-08 | 59 |
vascular cord | 1.99e-08 | 59 |
skeletal element | 2.42e-08 | 90 |
hematopoietic system | 6.03e-08 | 98 |
blood island | 6.03e-08 | 98 |
skeletal system | 1.10e-07 | 100 |
mesoderm | 7.01e-07 | 315 |
mesoderm-derived structure | 7.01e-07 | 315 |
presumptive mesoderm | 7.01e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.23e-08 | 31 |