FFCP PHASE1:Hg19::chr19:38826462..38826475,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:38826462..38826475,+ to FFCP PHASE1:Hg19::chr19:38826462..38826475,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57828 | |EntrezGene=57828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25243 | |HGNC=25243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471517_5end | |||
|cluster_id=chr19:38826462..38826475,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_CATSPERG_5end | |||
|id=chr19:38826462..38826475,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.15e-11;10!UBERON:0005564;5.15e-11;10!UBERON:0006215;1.19e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-32!115;UBERON:0001049!2.27e-22!57;UBERON:0005068!2.27e-22!57;UBERON:0006241!2.27e-22!57;UBERON:0007135!2.27e-22!57;UBERON:0003075!1.04e-19!86;UBERON:0007284!1.04e-19!86;UBERON:0002616!1.74e-18!59;UBERON:0002346!3.59e-18!90;UBERON:0005743!1.47e-17!86;UBERON:0001017!4.17e-17!82;UBERON:0000073!4.98e-17!94;UBERON:0001016!4.98e-17!94;UBERON:0002780!5.72e-17!41;UBERON:0001890!5.72e-17!41;UBERON:0006240!5.72e-17!41;UBERON:0000955!6.79e-17!69;UBERON:0006238!6.79e-17!69;UBERON:0003080!2.34e-16!42;UBERON:0002020!2.65e-15!34;UBERON:0003528!2.65e-15!34;UBERON:0001893!4.15e-15!34;UBERON:0002791!1.78e-14!33;UBERON:0001869!2.16e-13!32;UBERON:0003056!5.07e-13!61;UBERON:0002619!5.33e-11!22;UBERON:0000956!2.40e-10!25;UBERON:0000203!2.40e-10!25;UBERON:0000153!2.07e-09!129;UBERON:0007811!2.07e-09!129;UBERON:0001950!4.70e-09!20;UBERON:0000033!2.00e-08!123;UBERON:0004121!2.60e-08!169;UBERON:0000200!7.55e-08!6;UBERON:0000924!8.44e-08!173;UBERON:0006601!8.44e-08!173;UBERON:0003076!2.98e-07!15;UBERON:0003057!2.98e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.29e-13;2!UBERON:0002757;1.29e-13;2!UBERON:0010134;1.29e-13;2!UBERON:0005408;1.29e-13;2!UBERON:0001899;1.29e-13;2!UBERON:0000473;1.61e-13;8!UBERON:0003135;4.22e-10;11!UBERON:0000178;1.59e-07;15!UBERON:0000179;1.59e-07;15!UBERON:0000463;1.59e-07;15!UBERON:0003296;1.86e-07;4!UBERON:0010133;1.86e-07;4!UBERON:0002784;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-13,2;UBERON:0002757,1.55e-13,2;UBERON:0010134,1.55e-13,2;UBERON:0005408,1.55e-13,2;UBERON:0001899,1.55e-13,2;UBERON:0000473,1.61e-13,8;UBERON:0003135,4.22e-10,11;UBERON:0007023,6.65e-08,114;UBERON:0000178,1.59e-07,15;UBERON:0000179,1.59e-07,15;UBERON:0000463,1.59e-07,15;UBERON:0003296,2.04e-07,4;UBERON:0010133,2.04e-07,4;UBERON:0002784,2.04e-07,4 | |||
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| ||
|short_description=p4@CATSPERG | |||
}} | }} |
Latest revision as of 19:22, 17 September 2015
Short description: | p4@CATSPERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CATSPERG_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000471517_5end |
EntrezGene: | CATSPERG |
HGNC: | 25243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-13 | 2 |
regional part of epithalamus | 1.55e-13 | 2 |
secretory circumventricular organ | 1.55e-13 | 2 |
circumventricular organ | 1.55e-13 | 2 |
epithalamus | 1.55e-13 | 2 |
testis | 1.61e-13 | 8 |
male reproductive organ | 4.22e-10 | 11 |
adult organism | 6.65e-08 | 114 |
blood | 1.59e-07 | 15 |
haemolymphatic fluid | 1.59e-07 | 15 |
organism substance | 1.59e-07 | 15 |
gland of diencephalon | 2.04e-07 | 4 |
neuroendocrine gland | 2.04e-07 | 4 |
regional part of diencephalon | 2.04e-07 | 4 |