FFCP PHASE1:Hg19::chr19:36398208..36398215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36398208..36398215,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr19:36398208..36398215,- | |||
|id=chr19:36398208..36398215,- | |||
|ontology_enrichment_celltype=CL:0002057!1.28e-81!42;CL:0002009!2.78e-79!65;CL:0002194!3.11e-78!63;CL:0000576!3.11e-78!63;CL:0000040!3.11e-78!63;CL:0000559!3.11e-78!63;CL:0000860!1.60e-75!45;CL:0000766!1.17e-73!76;CL:0000557!1.05e-71!71;CL:0000839!2.18e-69!70;CL:0000763!1.61e-63!112;CL:0000049!1.61e-63!112;CL:0000738!2.38e-44!140;CL:0002032!7.00e-41!165;CL:0000837!7.00e-41!165;CL:0000037!1.07e-38!172;CL:0000566!1.07e-38!172;CL:0002087!2.24e-38!119;CL:0002031!2.48e-38!124;CL:0000988!7.30e-36!182;CL:0000990!4.14e-19!8;CL:0000451!2.18e-15!10;CL:0000134!6.33e-12!358;CL:0000840!1.05e-11!5;CL:0001029!1.05e-11!5;CL:0002320!1.87e-11!365;CL:0002393!4.43e-11!9;CL:0002397!4.43e-11!9;CL:0000775!2.05e-10!3;CL:0000219!8.40e-10!390;CL:0000453!1.91e-09!5;CL:0000875!1.98e-09!3;CL:0002396!1.98e-09!3;CL:0000048!7.62e-08!430;CL:0000723!1.44e-07!436;CL:0000034!3.26e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.79e-73;33!CL:0002057;2.79e-73;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;1.02e-34;48!CL:0000766;3.89e-22;69!CL:0000763;1.94e-16;100!CL:0000775;1.57e-11;3!CL:0000738;1.08e-09;136!CL:0002087;5.35e-09;104!CL:0000988;5.73e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.03e-67,48;CL:0000234,7.03e-67,48;CL:0000860,1.49e-62,42;CL:0002057,1.49e-62,42;CL:0002194,8.24e-53,59;CL:0000576,8.24e-53,59;CL:0000040,8.24e-53,59;CL:0000559,8.24e-53,59;CL:0000766,5.26e-52,72;CL:0002009,5.40e-51,61;CL:0000839,6.30e-47,66;CL:0000557,3.47e-46,67;CL:0000763,1.32e-33,108;CL:0000049,1.32e-33,108;CL:0000738,5.79e-26,136;CL:0002087,1.36e-25,115;CL:0002031,2.20e-24,120;CL:0002032,2.30e-21,161;CL:0000837,2.30e-21,161;CL:0000037,2.55e-20,168;CL:0000988,4.28e-19,177;CL:0000775,1.49e-11,3;CL:0000134,1.44e-07,354;CL:0002320,2.43e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-50;42!CL:0000049;1.61e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.27e-65!102;UBERON:0003061!2.27e-65!102;UBERON:0002371!1.93e-62!80;UBERON:0002193!1.87e-58!112;UBERON:0001474!2.48e-57!86;UBERON:0004765!3.41e-47!101;UBERON:0001434!3.41e-47!101;UBERON:0002405!4.17e-42!115;UBERON:0003081!1.36e-25!216;UBERON:0002204!3.76e-24!167;UBERON:0002384!8.19e-11!375;UBERON:0000178!8.28e-07!15;UBERON:0000179!8.28e-07!15;UBERON:0000463!8.28e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.11e-41,98;UBERON:0003061,8.11e-41,98;UBERON:0002371,2.25e-40,76;UBERON:0001474,3.37e-37,82;UBERON:0002193,9.99e-37,108;UBERON:0004765,1.29e-33,90;UBERON:0002405,1.99e-32,93;UBERON:0001434,6.25e-30,100;UBERON:0003081,8.17e-18,203;UBERON:0002204,1.57e-16,167;UBERON:0000926,4.64e-10,315;UBERON:0004120,4.64e-10,315;UBERON:0006603,4.64e-10,315;UBERON:0002384,4.95e-07,371 | |||
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| ||
|short_description=p@chr19:36398208..36398215,- | |||
}} | }} |
Latest revision as of 06:56, 26 July 2015
Short description: | p@chr19:36398208..36398215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36398208..36398215, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.03e-67 | 48 |
phagocyte | 7.03e-67 | 48 |
classical monocyte | 1.49e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-62 | 42 |
monopoietic cell | 8.24e-53 | 59 |
monocyte | 8.24e-53 | 59 |
monoblast | 8.24e-53 | 59 |
promonocyte | 8.24e-53 | 59 |
myeloid leukocyte | 5.26e-52 | 72 |
macrophage dendritic cell progenitor | 5.40e-51 | 61 |
myeloid lineage restricted progenitor cell | 6.30e-47 | 66 |
granulocyte monocyte progenitor cell | 3.47e-46 | 67 |
myeloid cell | 1.32e-33 | 108 |
common myeloid progenitor | 1.32e-33 | 108 |
leukocyte | 5.79e-26 | 136 |
nongranular leukocyte | 1.36e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-24 | 120 |
hematopoietic oligopotent progenitor cell | 2.30e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-21 | 161 |
hematopoietic stem cell | 2.55e-20 | 168 |
hematopoietic cell | 4.28e-19 | 177 |
neutrophil | 1.49e-11 | 3 |
mesenchymal cell | 1.44e-07 | 354 |
connective tissue cell | 2.43e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.11e-41 | 98 |
blood island | 8.11e-41 | 98 |
bone marrow | 2.25e-40 | 76 |
bone element | 3.37e-37 | 82 |
hemolymphoid system | 9.99e-37 | 108 |
skeletal element | 1.29e-33 | 90 |
immune system | 1.99e-32 | 93 |
skeletal system | 6.25e-30 | 100 |
lateral plate mesoderm | 8.17e-18 | 203 |
musculoskeletal system | 1.57e-16 | 167 |
mesoderm | 4.64e-10 | 315 |
mesoderm-derived structure | 4.64e-10 | 315 |
presumptive mesoderm | 4.64e-10 | 315 |
connective tissue | 4.95e-07 | 371 |