FFCP PHASE1:Hg19::chr19:31840130..31840160,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:31840130..31840160,- to FFCP PHASE1:Hg19::chr19:31840130..31840160,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57616 | |EntrezGene=57616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30700 | |HGNC=30700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558569_5end | |||
|cluster_id=chr19:31840130..31840160,- | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_2_at_TSHZ3_5end | |||
|id=chr19:31840130..31840160,- | |||
|ontology_enrichment_celltype=CL:0000055!6.57e-21!180;CL:0000057!7.93e-13!75;CL:0000680!2.69e-08!57;CL:0000056!2.69e-08!57;CL:0000355!2.69e-08!57;CL:0000187!4.22e-08!54;CL:0000192!4.71e-08!42;CL:0000514!4.71e-08!42;CL:0000183!1.14e-07!59;CL:0000393!1.34e-07!60;CL:0000211!1.34e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-11,76;CL:0000192,5.29e-08,43;CL:0000514,5.29e-08,43;CL:0000187,5.55e-08,55;CL:0000680,1.08e-07,58;CL:0000056,1.08e-07,58;CL:0000355,1.08e-07,58;CL:0000393,2.36e-07,61;CL:0000211,2.36e-07,61;CL:0002539,7.33e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.01e-10!20;UBERON:0000914!5.03e-10!83;UBERON:0002329!5.03e-10!83;UBERON:0003077!5.03e-10!83;UBERON:0003059!5.03e-10!83;UBERON:0007282!5.03e-10!83;UBERON:0009618!5.03e-10!83;UBERON:0007285!5.03e-10!83;UBERON:0000479!1.03e-09!787;UBERON:0002619!1.28e-09!22;UBERON:0000955!2.03e-09!69;UBERON:0006238!2.03e-09!69;UBERON:0001017!4.31e-09!82;UBERON:0000468!4.34e-09!659;UBERON:0000073!5.66e-09!94;UBERON:0001016!5.66e-09!94;UBERON:0000956!5.90e-09!25;UBERON:0000203!5.90e-09!25;UBERON:0004290!7.90e-09!70;UBERON:0001869!8.83e-09!32;UBERON:0002385!2.24e-08!63;UBERON:0001015!2.24e-08!63;UBERON:0000383!2.24e-08!63;UBERON:0005743!2.50e-08!86;UBERON:0001893!2.76e-08!34;UBERON:0000475!3.28e-08!365;UBERON:0000924!4.92e-08!173;UBERON:0006601!4.92e-08!173;UBERON:0001134!4.97e-08!61;UBERON:0002036!4.97e-08!61;UBERON:0003082!4.97e-08!61;UBERON:0002791!6.53e-08!33;UBERON:0000486!6.99e-08!82;UBERON:0002020!9.88e-08!34;UBERON:0003528!9.88e-08!34;UBERON:0003080!1.63e-07!42;UBERON:0004121!2.03e-07!169;UBERON:0002780!2.23e-07!41;UBERON:0001890!2.23e-07!41;UBERON:0006240!2.23e-07!41;UBERON:0002616!4.64e-07!59;UBERON:0001135!8.76e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.07e-12;20!UBERON:0002619;1.96e-11;22!UBERON:0000956;5.57e-10;25!UBERON:0000203;5.57e-10;25!UBERON:0001869;2.05e-08;32!UBERON:0002791;1.24e-07;32!UBERON:0001135;1.68e-07;15!UBERON:0001893;2.38e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.83e-12,20;UBERON:0002619,1.92e-11,22;UBERON:0000956,5.55e-10,25;UBERON:0000203,5.55e-10,25;UBERON:0001869,2.42e-09,32;UBERON:0000479,2.66e-09,773;UBERON:0007524,1.14e-08,73;UBERON:0003077,2.03e-08,72;UBERON:0007285,2.03e-08,72;UBERON:0002791,2.44e-08,32;UBERON:0001893,2.73e-08,34;UBERON:0002329,4.51e-08,71;UBERON:0003059,4.51e-08,71;UBERON:0007282,4.51e-08,71;UBERON:0004290,4.51e-08,71;UBERON:0009618,4.51e-08,71;UBERON:0001016,5.82e-08,89;UBERON:0000955,7.81e-08,68;UBERON:0006238,7.81e-08,68;UBERON:0001017,1.17e-07,81;UBERON:0002385,1.37e-07,64;UBERON:0001015,1.37e-07,64;UBERON:0000383,1.37e-07,64;UBERON:0001135,1.47e-07,15;UBERON:0001134,1.60e-07,62;UBERON:0002036,1.60e-07,62;UBERON:0003082,1.60e-07,62;UBERON:0002199,1.66e-07,46;UBERON:0002416,1.66e-07,46;UBERON:0003528,2.21e-07,34;UBERON:0002020,2.21e-07,34;UBERON:0002097,6.29e-07,41;UBERON:0004237,7.33e-07,10;UBERON:0004695,7.33e-07,10;UBERON:0002111,7.33e-07,10;UBERON:0004178,7.33e-07,10;UBERON:0002780,8.75e-07,41;UBERON:0001890,8.75e-07,41;UBERON:0003080,8.75e-07,41;UBERON:0006240,8.75e-07,41 | |||
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| ||
|short_description=p2@TSHZ3 | |||
}} | }} |
Latest revision as of 05:07, 17 September 2015
Short description: | p2@TSHZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSHZ3_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | 0bp_to_ENST00000558569_5end |
EntrezGene: | TSHZ3 |
HGNC: | 30700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-11 | 76 |
smooth muscle cell | 5.29e-08 | 43 |
smooth muscle myoblast | 5.29e-08 | 43 |
muscle cell | 5.55e-08 | 55 |
muscle precursor cell | 1.08e-07 | 58 |
myoblast | 1.08e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-07 | 58 |
electrically responsive cell | 2.36e-07 | 61 |
electrically active cell | 2.36e-07 | 61 |
aortic smooth muscle cell | 7.33e-07 | 10 |