FFCP PHASE1:Hg19::chr18:61034401..61034413,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:61034401..61034413,- to FFCP PHASE1:Hg19::chr18:61034401..61034413,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2531 | |EntrezGene=2531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4021 | |HGNC=4021 | ||
|TSSclassifier=strong | |||
|UniProt=B4DMX0 | |UniProt=B4DMX0 | ||
|association_with_transcript=23bp_to_ENST00000326575_5end | |||
|cluster_id=chr18:61034401..61034413,- | |||
|description=CAGE_peak_4_at_KDSR_5end | |||
|id=chr18:61034401..61034413,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.09e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-12!115;UBERON:0000955!4.36e-12!69;UBERON:0006238!4.36e-12!69;UBERON:0005743!6.52e-12!86;UBERON:0000153!7.40e-12!129;UBERON:0007811!7.40e-12!129;UBERON:0002616!1.01e-11!59;UBERON:0001017!1.24e-11!82;UBERON:0000033!1.46e-11!123;UBERON:0001049!2.01e-11!57;UBERON:0005068!2.01e-11!57;UBERON:0006241!2.01e-11!57;UBERON:0007135!2.01e-11!57;UBERON:0000073!1.42e-10!94;UBERON:0001016!1.42e-10!94;UBERON:0000924!4.65e-10!173;UBERON:0006601!4.65e-10!173;UBERON:0004121!5.77e-10!169;UBERON:0002346!6.89e-09!90;UBERON:0003075!6.99e-09!86;UBERON:0007284!6.99e-09!86;UBERON:0000062!1.26e-08!511;UBERON:0003080!2.46e-07!42;UBERON:0002780!6.31e-07!41;UBERON:0001890!6.31e-07!41;UBERON:0006240!6.31e-07!41;UBERON:0000477!8.85e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.38e-09;53!UBERON:0002616;1.38e-09;53!UBERON:0002780;1.05e-08;41!UBERON:0001890;1.05e-08;41!UBERON:0001893;4.23e-08;34!UBERON:0003528;5.08e-08;34!UBERON:0002020;5.08e-08;34!UBERON:0002791;1.04e-07;32!UBERON:0000125;1.86e-07;9!UBERON:0002308;1.86e-07;9!UBERON:0001869;3.01e-07;32!UBERON:0002298;3.21e-07;6!UBERON:0000955;5.45e-07;68!UBERON:0001950;9.40e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.02e-19,114;UBERON:0001049,3.38e-17,56;UBERON:0005068,3.38e-17,56;UBERON:0006241,3.38e-17,56;UBERON:0007135,3.38e-17,56;UBERON:0000073,4.35e-16,53;UBERON:0002616,4.35e-16,53;UBERON:0000955,5.67e-16,68;UBERON:0006238,5.67e-16,68;UBERON:0001017,2.58e-15,81;UBERON:0001016,5.07e-14,89;UBERON:0003075,1.05e-13,82;UBERON:0007284,1.05e-13,82;UBERON:0002346,3.10e-13,86;UBERON:0010371,1.06e-12,104;UBERON:0004121,1.28e-11,171;UBERON:0000924,1.28e-11,171;UBERON:0006601,1.28e-11,171;UBERON:0002780,1.50e-11,41;UBERON:0001890,1.50e-11,41;UBERON:0003080,1.50e-11,41;UBERON:0006240,1.50e-11,41;UBERON:0003528,1.51e-10,34;UBERON:0002020,1.51e-10,34;UBERON:0001893,2.40e-10,34;UBERON:0003056,2.74e-09,61;UBERON:0010314,2.86e-09,132;UBERON:0011216,5.44e-09,223;UBERON:0002791,5.52e-09,32;UBERON:0001869,8.96e-09,32;UBERON:0000125,2.96e-07,9;UBERON:0002308,2.96e-07,9;UBERON:0002619,3.80e-07,22;UBERON:0003076,4.02e-07,15;UBERON:0003057,4.02e-07,15;UBERON:0001950,4.80e-07,20;UBERON:0002298,5.36e-07,6 | |||
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| ||
|short_description=p4@KDSR | |||
}} | }} |
Latest revision as of 03:41, 20 September 2015
Short description: | p4@KDSR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KDSR_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000326575_5end |
EntrezGene: | KDSR |
HGNC: | 4021 |
UniProt: | B4DMX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.09e-07 | 6 |