FFCP PHASE1:Hg19::chr18:53257001..53257015,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:53257001..53257015,- to FFCP PHASE1:Hg19::chr18:53257001..53257015,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5M6 | |UniProt=B7Z5M6 | ||
|association_with_transcript=29bp_to_ENST00000537578,NM_001243227,NM_001243228,uc010dpi.2,uc010xdy.1_5end | |||
|cluster_id=chr18:53257001..53257015,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_TCF4_5end | |||
|id=chr18:53257001..53257015,- | |||
|ontology_enrichment_celltype=CL:0002139!2.97e-13!24;CL:0000115!1.73e-10!35;CL:0000071!1.14e-09!18;CL:0002546!1.14e-09!18;CL:0002078!2.87e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.46e-14;24!CL:0000071;2.30e-10;18!CL:0000115;7.87e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.38e-14,24;CL:0000115,1.32e-11,36;CL:0000071,2.13e-10,18;CL:0002546,2.13e-10,18;CL:0002078,2.35e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.30e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-15!115;UBERON:0001017!1.39e-13!82;UBERON:0000073!2.18e-13!94;UBERON:0001016!2.18e-13!94;UBERON:0005743!8.21e-13!86;UBERON:0001049!2.17e-10!57;UBERON:0005068!2.17e-10!57;UBERON:0006241!2.17e-10!57;UBERON:0007135!2.17e-10!57;UBERON:0000955!3.26e-10!69;UBERON:0006238!3.26e-10!69;UBERON:0002616!4.77e-10!59;UBERON:0001986!1.14e-09!18;UBERON:0004638!1.14e-09!18;UBERON:0004852!1.14e-09!18;UBERON:0001009!8.90e-09!113;UBERON:0000055!9.25e-09!69;UBERON:0002049!1.24e-08!79;UBERON:0007798!1.24e-08!79;UBERON:0003080!2.65e-08!42;UBERON:0004535!2.68e-08!110;UBERON:0002780!5.85e-08!41;UBERON:0001890!5.85e-08!41;UBERON:0006240!5.85e-08!41;UBERON:0004872!6.85e-08!84;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0006914!1.38e-07!25;UBERON:0000487!1.59e-07!22;UBERON:0000025!1.69e-07!194;UBERON:0001893!2.38e-07!34;UBERON:0000479!2.47e-07!787;UBERON:0002020!2.58e-07!34;UBERON:0003528!2.58e-07!34;UBERON:0002791!3.79e-07!33;UBERON:0001869!4.33e-07!32;UBERON:0004111!4.69e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.30e-10;18!UBERON:0001986;2.30e-10;18!UBERON:0004852;2.30e-10;18!UBERON:0000487;1.57e-08;22!UBERON:0006914;2.48e-08;25!UBERON:0000956;4.45e-08;25!UBERON:0000203;4.45e-08;25!UBERON:0002619;1.57e-07;22!UBERON:0001869;3.15e-07;32!UBERON:0003528;4.44e-07;34!UBERON:0002020;4.44e-07;34!UBERON:0002791;4.58e-07;32!UBERON:0001893;5.68e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-15,114;UBERON:0001016,2.34e-13,89;UBERON:0001017,4.09e-13,81;UBERON:0004638,2.13e-10,18;UBERON:0001986,2.13e-10,18;UBERON:0004852,2.13e-10,18;UBERON:0001049,2.20e-10,56;UBERON:0005068,2.20e-10,56;UBERON:0006241,2.20e-10,56;UBERON:0007135,2.20e-10,56;UBERON:0000073,4.41e-10,53;UBERON:0002616,4.41e-10,53;UBERON:0000955,2.22e-09,68;UBERON:0006238,2.22e-09,68;UBERON:0000025,7.64e-09,192;UBERON:0000487,1.51e-08,22;UBERON:0004111,1.65e-08,240;UBERON:0006914,1.71e-08,25;UBERON:0000055,2.08e-08,68;UBERON:0002780,2.08e-08,41;UBERON:0001890,2.08e-08,41;UBERON:0003080,2.08e-08,41;UBERON:0006240,2.08e-08,41;UBERON:0001893,2.27e-08,34;UBERON:0003528,2.50e-08,34;UBERON:0002020,2.50e-08,34;UBERON:0000956,4.38e-08,25;UBERON:0000203,4.38e-08,25;UBERON:0001869,4.59e-08,32;UBERON:0002791,7.48e-08,32;UBERON:0002619,1.39e-07,22;UBERON:0002049,1.69e-07,78;UBERON:0007798,1.69e-07,78;UBERON:0001009,1.89e-07,112;UBERON:0000479,3.15e-07,773;UBERON:0004872,3.84e-07,83;UBERON:0003075,5.02e-07,82;UBERON:0007284,5.02e-07,82;UBERON:0004535,5.94e-07,109;UBERON:0007500,9.13e-07,59;UBERON:0001981,9.13e-07,59;UBERON:0004537,9.13e-07,59;UBERON:0006965,9.13e-07,59 | |||
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| ||
|short_description=p5@TCF4 | |||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p5@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TCF4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 29bp_to_ENST00000537578, NM_001243227, NM_001243228, uc010dpi.2, uc010xdy.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B7Z5M6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.38e-14 | 24 |
endothelial cell | 1.32e-11 | 36 |
blood vessel endothelial cell | 2.13e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-10 | 18 |
meso-epithelial cell | 2.35e-08 | 45 |