FFCP PHASE1:Hg19::chr18:34273196..34273214,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:34273196..34273214,+ to FFCP PHASE1:Hg19::chr18:34273196..34273214,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80206 | |EntrezGene=80206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26178 | |HGNC=26178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=257bp_to_uc010dna.1_5end | |||
|cluster_id=chr18:34273196..34273214,+ | |||
|description=CAGE_peak_2_at_FHOD3_5end | |||
|id=chr18:34273196..34273214,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.60e-28!180;CL:0000057!2.01e-21!75;CL:0002620!1.85e-17!23;CL:0000192!4.05e-12!42;CL:0000514!4.05e-12!42;CL:0000187!1.07e-10!54;CL:0000680!1.15e-09!57;CL:0000056!1.15e-09!57;CL:0000355!1.15e-09!57;CL:0002539!3.86e-09!10;CL:0000183!4.85e-09!59;CL:0000393!9.54e-09!60;CL:0000211!9.54e-09!60;CL:0000359!1.04e-08!32;CL:0002556!1.44e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-27;23!CL:0002556;5.40e-16;6!CL:0002539;1.55e-14;10!CL:0000057;2.67e-10;73!CL:0002552;5.32e-09;5!CL:0000135;3.06e-08;3!CL:0000388;3.06e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.42e-27,76;CL:0002620,1.69e-27,23;CL:0002556,4.64e-16,6;CL:0002539,1.47e-14,10;CL:0002552,6.66e-09,5;CL:0000135,3.22e-08,3;CL:0000388,3.22e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.48e-07!5;DOID:450!2.48e-07!5;DOID:66!2.48e-07!5;DOID:423!2.48e-07!5;DOID:0080000!2.48e-07!5;DOID:11722!2.48e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.46e-13;5!DOID:450;1.46e-13;5!DOID:66;1.46e-13;5!DOID:423;1.46e-13;5!DOID:0080000;1.46e-13;5!DOID:11722;1.46e-13;5!DOID:3307;7.36e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.64e-13,5;DOID:450,1.64e-13,5;DOID:66,1.64e-13,5;DOID:423,1.64e-13,5;DOID:0080000,1.64e-13,5;DOID:11722,1.64e-13,5;DOID:3307,7.37e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.27e-19!95;UBERON:0000914!3.74e-18!83;UBERON:0002329!3.74e-18!83;UBERON:0003077!3.74e-18!83;UBERON:0003059!3.74e-18!83;UBERON:0007282!3.74e-18!83;UBERON:0009618!3.74e-18!83;UBERON:0007285!3.74e-18!83;UBERON:0000475!1.31e-13!365;UBERON:0004290!3.52e-12!70;UBERON:0002385!4.04e-12!63;UBERON:0001015!4.04e-12!63;UBERON:0000383!4.04e-12!63;UBERON:0005256!1.36e-11!143;UBERON:0002097!3.32e-11!40;UBERON:0002199!5.15e-11!45;UBERON:0002416!5.15e-11!45;UBERON:0001134!6.31e-11!61;UBERON:0002036!6.31e-11!61;UBERON:0003082!6.31e-11!61;UBERON:0000486!1.61e-09!82;UBERON:0001135!1.77e-09!15;UBERON:0004237!3.86e-09!10;UBERON:0004695!3.86e-09!10;UBERON:0002111!3.86e-09!10;UBERON:0004178!3.86e-09!10;UBERON:0000481!7.63e-09!347;UBERON:0001758!1.44e-08!6;UBERON:0003672!1.44e-08!6;UBERON:0007023!1.49e-08!115;UBERON:0000075!2.17e-08!13;UBERON:0005944!2.17e-08!13;UBERON:0004288!2.17e-08!13;UBERON:0003089!2.17e-08!13;UBERON:0002100!5.51e-07!216;UBERON:0004573!8.83e-07!33;UBERON:0004571!8.83e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;5.40e-16;6!UBERON:0003672;5.40e-16;6!UBERON:0004237;1.55e-14;10!UBERON:0004695;1.55e-14;10!UBERON:0002111;1.55e-14;10!UBERON:0004178;1.55e-14;10!UBERON:0003129;1.38e-13;7!UBERON:0002097;2.27e-12;41!UBERON:0001135;6.69e-12;15!UBERON:0011137;2.92e-11;11!UBERON:0010323;2.92e-11;11!UBERON:0002199;4.47e-10;46!UBERON:0002416;4.47e-10;46!UBERON:0000075;2.52e-09;16!UBERON:0007846;3.06e-08;3!UBERON:0000043;3.06e-08;3!UBERON:0007845;3.06e-08;3!UBERON:0003102;3.29e-08;50!UBERON:0000947;9.97e-08;21!UBERON:0010191;9.97e-08;21!UBERON:0000165;1.21e-07;28!UBERON:0002385;2.80e-07;31!UBERON:0001015;2.80e-07;31!UBERON:0000383;2.80e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.34e-25,99;UBERON:0002097,7.08e-17,41;UBERON:0001758,4.64e-16,6;UBERON:0003672,4.64e-16,6;UBERON:0004237,1.47e-14,10;UBERON:0004695,1.47e-14,10;UBERON:0002111,1.47e-14,10;UBERON:0004178,1.47e-14,10;UBERON:0002199,1.70e-14,46;UBERON:0002416,1.70e-14,46;UBERON:0003129,1.22e-13,7;UBERON:0001135,6.43e-12,15;UBERON:0010323,2.64e-11,11;UBERON:0000075,2.11e-09,16;UBERON:0000165,6.32e-09,29;UBERON:0000930,6.32e-09,29;UBERON:0011137,1.28e-08,14;UBERON:0007846,3.22e-08,3;UBERON:0000043,3.22e-08,3;UBERON:0007845,3.22e-08,3;UBERON:0000947,9.62e-08,21;UBERON:0010191,9.62e-08,21 | |||
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| ||
|short_description=p2@FHOD3 | |||
}} | }} |
Latest revision as of 09:41, 19 September 2015
Short description: | p2@FHOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FHOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 257bp_to_uc010dna.1_5end |
EntrezGene: | FHOD3 |
HGNC: | 26178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.42e-27 | 76 |
skin fibroblast | 1.69e-27 | 23 |
fibroblast of periodontium | 4.64e-16 | 6 |
aortic smooth muscle cell | 1.47e-14 | 10 |
fibroblast of gingiva | 6.66e-09 | 5 |
fibrocyte | 3.22e-08 | 3 |
tendon cell | 3.22e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.34e-25 | 99 |
skin of body | 7.08e-17 | 41 |
periodontium | 4.64e-16 | 6 |
dentition | 4.64e-16 | 6 |
blood vessel smooth muscle | 1.47e-14 | 10 |
arterial system smooth muscle | 1.47e-14 | 10 |
artery smooth muscle tissue | 1.47e-14 | 10 |
aorta smooth muscle tissue | 1.47e-14 | 10 |
integument | 1.70e-14 | 46 |
integumental system | 1.70e-14 | 46 |
skull | 1.22e-13 | 7 |
smooth muscle tissue | 6.43e-12 | 15 |
cranial skeletal system | 2.64e-11 | 11 |
subdivision of skeletal system | 2.11e-09 | 16 |
mouth | 6.32e-09 | 29 |
stomodeum | 6.32e-09 | 29 |
axial skeletal system | 1.28e-08 | 14 |
dense regular connective tissue | 3.22e-08 | 3 |
tendon | 3.22e-08 | 3 |
regular connective tissue | 3.22e-08 | 3 |
aorta | 9.62e-08 | 21 |
aortic system | 9.62e-08 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.64e-13 | 5 |
myotonic disease | 1.64e-13 | 5 |
muscle tissue disease | 1.64e-13 | 5 |
myopathy | 1.64e-13 | 5 |
muscular disease | 1.64e-13 | 5 |
myotonic dystrophy | 1.64e-13 | 5 |
teratoma | 7.37e-07 | 2 |