FFCP PHASE1:Hg19::chr18:29178527..29178571,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29178527..29178571,+ to FFCP PHASE1:Hg19::chr18:29178527..29178571,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:29178527..29178571,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_at_chr18:29178527..29178571,+ | |||
|id=chr18:29178527..29178571,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.25e-08!12;CL:0000417!5.25e-08!12;CL:0000668!5.25e-08!12;CL:0000414!5.25e-08!12;CL:0000412!5.25e-08!12;CL:0000182!5.25e-08!12;CL:0002322!3.52e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.07e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.95e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.02e-21!86;UBERON:0000073!1.70e-20!94;UBERON:0001016!1.70e-20!94;UBERON:0001049!4.39e-17!57;UBERON:0005068!4.39e-17!57;UBERON:0006241!4.39e-17!57;UBERON:0007135!4.39e-17!57;UBERON:0001017!9.27e-17!82;UBERON:0007023!3.40e-16!115;UBERON:0003075!4.80e-16!86;UBERON:0007284!4.80e-16!86;UBERON:0002346!4.19e-15!90;UBERON:0000955!5.19e-15!69;UBERON:0006238!5.19e-15!69;UBERON:0002616!1.69e-14!59;UBERON:0001896!4.75e-13!3;UBERON:0005290!4.75e-13!3;UBERON:0010096!4.75e-13!3;UBERON:0002298!5.42e-12!8;UBERON:0002780!1.35e-10!41;UBERON:0001890!1.35e-10!41;UBERON:0006240!1.35e-10!41;UBERON:0003056!1.62e-10!61;UBERON:0004732!2.52e-10!13;UBERON:0003080!2.72e-10!42;UBERON:0000033!1.27e-09!123;UBERON:0002107!1.95e-09!19;UBERON:0006925!1.95e-09!19;UBERON:0008836!1.95e-09!19;UBERON:0001905!3.17e-09!2;UBERON:0002757!3.17e-09!2;UBERON:0010134!3.17e-09!2;UBERON:0002784!3.17e-09!2;UBERON:0005408!3.17e-09!2;UBERON:0001899!3.17e-09!2;UBERON:0009497!5.70e-09!25;UBERON:0000015!5.70e-09!25;UBERON:0002423!5.70e-09!25;UBERON:0006235!5.70e-09!25;UBERON:0004161!5.70e-09!25;UBERON:0000153!5.95e-09!129;UBERON:0007811!5.95e-09!129;UBERON:0005162!6.47e-09!2;UBERON:0000122!6.47e-09!2;UBERON:0004121!7.39e-09!169;UBERON:0003076!9.84e-09!15;UBERON:0003057!9.84e-09!15;UBERON:0000924!1.60e-08!173;UBERON:0006601!1.60e-08!173;UBERON:0008835!5.23e-08!22;UBERON:0003894!5.23e-08!22;UBERON:0004733!5.41e-08!12;UBERON:0002028!5.41e-08!12;UBERON:0007277!5.41e-08!12;UBERON:0002368!1.07e-07!35;UBERON:0000966!1.07e-07!5;UBERON:0005388!1.07e-07!5;UBERON:0001802!1.07e-07!5;UBERON:0009854!1.29e-07!23;UBERON:0002791!1.87e-07!33;UBERON:0000160!2.95e-07!27;UBERON:0001893!3.38e-07!34;UBERON:0000025!3.46e-07!194;UBERON:0002020!4.50e-07!34;UBERON:0003528!4.50e-07!34;UBERON:0000949!5.67e-07!45;UBERON:0007499!6.33e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.21e-17;3!UBERON:0005290;1.21e-17;3!UBERON:0001905;2.68e-12;2!UBERON:0002757;2.68e-12;2!UBERON:0010134;2.68e-12;2!UBERON:0005408;2.68e-12;2!UBERON:0001899;2.68e-12;2!UBERON:0005162;8.58e-12;2!UBERON:0000122;8.58e-12;2!UBERON:0004732;2.05e-10;13!UBERON:0000966;2.32e-10;5!UBERON:0005388;2.32e-10;5!UBERON:0001802;2.32e-10;5!UBERON:0000073;2.23e-09;53!UBERON:0002616;2.23e-09;53!UBERON:0002298;4.61e-09;6!UBERON:0001781;5.07e-08;3!UBERON:0001782;5.07e-08;3!UBERON:0002780;6.14e-08;41!UBERON:0001890;6.14e-08;41!UBERON:0002423;1.21e-07;25!UBERON:0000955;1.22e-07;68!UBERON:0001894;1.23e-07;7!UBERON:0004733;1.39e-07;12!UBERON:0002028;1.39e-07;12!UBERON:0002107;2.28e-07;19!UBERON:0006925;2.28e-07;19!UBERON:0001017;6.42e-07;75!UBERON:0002336;7.39e-07;1!UBERON:0011215;7.39e-07;1!UBERON:0001018;7.39e-07;1!UBERON:0002473;7.39e-07;1!UBERON:0005340;7.39e-07;1!UBERON:0003544;7.39e-07;1!UBERON:0005970;7.39e-07;1!UBERON:0002316;7.39e-07;1!UBERON:0001020;7.39e-07;1!UBERON:0002437;7.39e-07;1!UBERON:0002368;8.27e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.28e-17,3;UBERON:0005290,1.28e-17,3;UBERON:0010096,1.28e-17,3;UBERON:0001017,3.31e-15,81;UBERON:0003075,3.34e-15,82;UBERON:0007284,3.34e-15,82;UBERON:0001016,3.68e-15,89;UBERON:0000966,1.24e-14,6;UBERON:0005388,1.24e-14,6;UBERON:0001802,1.24e-14,6;UBERON:0000073,2.22e-14,53;UBERON:0002616,2.22e-14,53;UBERON:0002346,2.46e-14,86;UBERON:0000955,2.73e-14,68;UBERON:0006238,2.73e-14,68;UBERON:0001049,1.74e-13,56;UBERON:0005068,1.74e-13,56;UBERON:0006241,1.74e-13,56;UBERON:0007135,1.74e-13,56;UBERON:0007023,4.14e-13,114;UBERON:0001781,1.51e-12,4;UBERON:0001905,2.84e-12,2;UBERON:0002757,2.84e-12,2;UBERON:0010134,2.84e-12,2;UBERON:0005408,2.84e-12,2;UBERON:0001899,2.84e-12,2;UBERON:0003056,4.60e-12,61;UBERON:0011216,6.64e-12,223;UBERON:0005162,7.69e-12,2;UBERON:0000122,7.69e-12,2;UBERON:0010371,2.94e-11,104;UBERON:0004732,2.01e-10,13;UBERON:0004121,3.50e-09,171;UBERON:0000924,3.50e-09,171;UBERON:0006601,3.50e-09,171;UBERON:0002298,4.74e-09,6;UBERON:0002780,5.85e-09,41;UBERON:0001890,5.85e-09,41;UBERON:0003080,5.85e-09,41;UBERON:0006240,5.85e-09,41;UBERON:0010314,3.82e-08,132;UBERON:0001782,5.07e-08,3;UBERON:0005424,5.07e-08,3;UBERON:0009497,1.20e-07,25;UBERON:0000015,1.20e-07,25;UBERON:0002423,1.20e-07,25;UBERON:0006235,1.20e-07,25;UBERON:0004161,1.20e-07,25;UBERON:0001894,1.31e-07,7;UBERON:0006222,1.31e-07,7;UBERON:0004733,1.42e-07,12;UBERON:0002028,1.42e-07,12;UBERON:0007277,1.42e-07,12;UBERON:0002107,2.28e-07,19;UBERON:0006925,2.28e-07,19;UBERON:0008836,2.28e-07,19;UBERON:0002368,4.17e-07,35;UBERON:0002336,7.39e-07,1;UBERON:0011215,7.39e-07,1;UBERON:0001018,7.39e-07,1;UBERON:0002473,7.39e-07,1;UBERON:0005340,7.39e-07,1;UBERON:0003544,7.39e-07,1;UBERON:0005970,7.39e-07,1;UBERON:0002316,7.39e-07,1;UBERON:0001020,7.39e-07,1;UBERON:0002437,7.39e-07,1;UBERON:0000949,7.57e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,0.829288440122964,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,101.404027857465,33.4161253670393,13.5881678536723,0,7.2563178740437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,11.844226059979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,9.11059505060049,50.077931660793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.6137830093626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.306049687774,0,0,0,0,0,0,0,0,0,31.018647875047,1.76259386507517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36438095162838,13.8212800207003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.176915129006678,0.611030144933625,0,0,0,10.7167801439277,0,2.34264445725339,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,3.20179492109029,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.412079291905832,0,0,0,0,9.53423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2587745707809,99.380166684166,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,371.569158807166,71.6601672928066,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23069818544453,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,12.580420607419,0,0,0,0,13.3925458969572,17.15046983316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.30135340159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,1.5299169235277,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,2.71965960763659,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,0.829288440122964,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,101.404027857465,33.4161253670393,13.5881678536723,0,7.2563178740437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,11.844226059979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,9.11059505060049,50.077931660793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.6137830093626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.306049687774,0,0,0,0,0,0,0,0,0,31.018647875047,1.76259386507517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36438095162838,13.8212800207003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.176915129006678,0.611030144933625,0,0,0,10.7167801439277,0,2.34264445725339,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,3.20179492109029,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.412079291905832,0,0,0,0,9.53423842781029,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.2587745707809,99.380166684166,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,371.569158807166,71.6601672928066,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23069818544453,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,12.580420607419,0,0,0,0,13.3925458969572,17.15046983316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.30135340159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,1.5299169235277,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,2.71965960763659,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:29178527..29178571,+ | |||
}} | }} |
Latest revision as of 00:21, 26 July 2015
Short description: | p@chr18:29178527..29178571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:29178527..29178571, + |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.07e-08 | 3 |