FFCP PHASE1:Hg19::chr18:29077929..29077947,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29077929..29077947,+ to FFCP PHASE1:Hg19::chr18:29077929..29077947,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1829 | |EntrezGene=1829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3049 | |HGNC=3049 | ||
|TSSclassifier=strong | |||
|UniProt=Q14126 | |UniProt=Q14126 | ||
|association_with_transcript=-79bp_to_ENST00000261590,NM_001943,uc002kwu.3_5end | |||
|cluster_id=chr18:29077929..29077947,+ | |||
|coexpression_cluster_id=C2456 | |||
|description=CAGE_peak_5_at_DSG2_5end | |||
|id=chr18:29077929..29077947,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.26e-22!254;CL:0000223!1.73e-14!59;CL:0002076!7.74e-14!43;CL:0000039!9.55e-09!7;CL:0000586!9.55e-09!7;CL:0002322!1.52e-07!5;CL:0002251!2.20e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.41e-26;5!CL:0000039;9.13e-19;7!CL:0000586;9.13e-19;7!CL:0000540;6.12e-13;6!CL:0000404;6.12e-13;6!CL:0002166;1.68e-11;3!CL:0002321;1.00e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.84e-26,5;CL:0000039,8.75e-19,7;CL:0000586,8.75e-19,7;CL:0000540,4.81e-13,6;CL:0000031,4.81e-13,6;CL:0000404,4.81e-13,6;CL:0002166,1.10e-11,3;CL:0000047,6.55e-10,8 | |||
|ontology_enrichment_development_v019=CL:0000031;6.12e-13;6!UBERON:0009117;1.15e-07;10!UBERON:0005564;1.15e-07;10 | |||
|ontology_enrichment_disease=DOID:305!6.48e-19!106;DOID:0050687!2.06e-12!143;DOID:14566!1.65e-08!239;DOID:162!3.06e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.08e-12;22!DOID:2994;1.08e-12;22!DOID:1799;1.26e-09;1!DOID:10165;1.26e-09;1!DOID:1798;1.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.33e-12,22;DOID:2994,1.33e-12,22;DOID:1799,1.43e-09,1;DOID:10165,1.43e-09,1;DOID:1798,1.43e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-13!169;UBERON:0000925!1.92e-13!169;UBERON:0006595!1.92e-13!169;UBERON:0005911!1.24e-09!82;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004921!4.97e-08!129;UBERON:0004185!4.97e-08!129;UBERON:0000077!1.06e-07!130;UBERON:0003929!1.11e-07!54;UBERON:0001048!9.31e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.57e-09;4!UBERON:0008895;7.57e-09;4!UBERON:0011159;3.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.51e-09,4;UBERON:0008895,5.51e-09,4;UBERON:0011159,2.36e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.573609190778008,1.58565817968474,2.91565490307268,1.74290914304278,0.932949495138334,1.26160425437814,2.55484151353081,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,1.87467667973554,1.34385702559088,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.368323955743585,0,0,0,0,1.61732207919271,0,0,1.37217117560738,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,0.309123034943167,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.826424576804891,1.34533047155574,0.510450849978337,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0.188287601553558,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0.211125408127993,0,0,3.02319297425131,0,0.369254416383208,0,0.808815160325942,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,3.91958637459702,2.87224462111271,0.651884231532048,0,0.183195186803725,0,0,0,0,0.676786981851542,0.392125068635479,0.335643173951685,0,0,0.421996129056054,0,0,0.865554558968364,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,1.13843818411917,0,0.520679215005393,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.561111741760736,0,0.19980960958213,0.144090417154106,0.458146384663663,0.171594997861965,0.288109595976299,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,0,1.16495949527454,0.472699093843342,0.494495150286999,0.808842526250219,0,0.169346664131569,0,0,3.3758161177654,3.16340704173638,1.66176135211674,0,0,0,0,0.315222829196793,0.786818822024972,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.845248493434508,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.577628330751691,0,0,0,0,0,0.781514011233092,2.3571602503328,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0.606965604236632,0,0.266107110487916,0.230467975111559,0.171488009437418,0,0,0.590969204419841,0.222462803784138,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0.236664001461131,0.340853619036631,0,0.22910686854405,0.62041277132864,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.401206833445841,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,1.13549782351571,1.31118686356435,0.633492505057185,0.407955318967927,1.60330443159336,0.18378979906969,1.25353769646188,0.151557396436479,0,0,0,0,0,0.322944549180031,0.31037357147929,0.224263725161227,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0.325613074443898,0.320182037633146,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.492603536699674,0.157421562627358,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.573609190778008,1.58565817968474,2.91565490307268,1.74290914304278,0.932949495138334,1.26160425437814,2.55484151353081,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.439001141634502,0,0.201057944823262,0.185176890317059,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,1.87467667973554,1.34385702559088,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.368323955743585,0,0,0,0,1.61732207919271,0,0,1.37217117560738,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.656029291399411,0.325378394664303,0.309123034943167,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.826424576804891,1.34533047155574,0.510450849978337,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0.188287601553558,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0.211125408127993,0,0,3.02319297425131,0,0.369254416383208,0,0.808815160325942,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,3.91958637459702,2.87224462111271,0.651884231532048,0,0.183195186803725,0,0,0,0,0.676786981851542,0.392125068635479,0.335643173951685,0,0,0.421996129056054,0,0,0.865554558968364,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,1.13843818411917,0,0.520679215005393,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.561111741760736,0,0.19980960958213,0.144090417154106,0.458146384663663,0.171594997861965,0.288109595976299,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0.446342914883745,0.134366944973453,0,1.16495949527454,0.472699093843342,0.494495150286999,0.808842526250219,0,0.169346664131569,0,0,3.3758161177654,3.16340704173638,1.66176135211674,0,0,0,0,0.315222829196793,0.786818822024972,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0.138348634936231,0.37494122388632,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.845248493434508,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.577628330751691,0,0,0,0,0,0.781514011233092,2.3571602503328,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0.606965604236632,0,0.266107110487916,0.230467975111559,0.171488009437418,0,0,0.590969204419841,0.222462803784138,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.3414369541879,0,0,0.236664001461131,0.340853619036631,0,0.22910686854405,0.62041277132864,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0.199882311849858,0.178553938605658,0,0.401206833445841,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,1.13549782351571,1.31118686356435,0.633492505057185,0.407955318967927,1.60330443159336,0.18378979906969,1.25353769646188,0.151557396436479,0,0,0,0,0,0.322944549180031,0.31037357147929,0.224263725161227,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0.325613074443898,0.320182037633146,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p5@DSG2 | |||
}} | }} |
Latest revision as of 05:06, 19 September 2015
Short description: | p5@DSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSG2_5end |
Coexpression cluster: | C2456_hepatoblastoma_iPS_choriocarcinoma_colon_HES3GFP_argyrophil_H9 |
Association with transcript: | -79bp_to_ENST00000261590, NM_001943, uc002kwu.3_5end |
EntrezGene: | DSG2 |
HGNC: | 3049 |
UniProt: | Q14126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.84e-26 | 5 |
germ line cell | 8.75e-19 | 7 |
germ cell | 8.75e-19 | 7 |
neuron | 4.81e-13 | 6 |
neuroblast | 4.81e-13 | 6 |
electrically signaling cell | 4.81e-13 | 6 |
epithelial cell of Malassez | 1.10e-11 | 3 |
neuronal stem cell | 6.55e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.51e-09 | 4 |
splanchnocranium | 5.51e-09 | 4 |
primary subdivision of cranial skeletal system | 2.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.33e-12 | 22 |
germ cell cancer | 1.33e-12 | 22 |
islet cell tumor | 1.43e-09 | 1 |
endocrine pancreas cancer | 1.43e-09 | 1 |
pancreatic endocrine carcinoma | 1.43e-09 | 1 |