FFCP PHASE1:Hg19::chr18:29027653..29027674,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29027653..29027674,+ to FFCP PHASE1:Hg19::chr18:29027653..29027674,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1830 | |EntrezGene=1830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3050 | |HGNC=3050 | ||
|TSSclassifier=strong | |||
|UniProt=P32926 | |UniProt=P32926 | ||
|association_with_transcript=-57bp_to_NM_001944,uc002kws.2_5end | |||
|cluster_id=chr18:29027653..29027674,+ | |||
|description=CAGE_peak_2_at_DSG3_5end | |||
|id=chr18:29027653..29027674,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.15e-26!43;CL:0000223!2.13e-18!59;CL:0002251!1.05e-17!21;CL:0000066!3.09e-15!254;CL:0002159!5.33e-14!13;CL:0002368!1.84e-13!13;CL:0000622!3.97e-10!5;CL:0000154!2.41e-08!6;CL:0000244!1.34e-07!4;CL:0000731!1.34e-07!4;CL:0002621!1.80e-07!3;CL:0000076!2.58e-07!62;CL:0002077!2.64e-07!33;CL:0002166!2.71e-07!3;CL:0002202!2.76e-07!9;CL:0002632!2.76e-07!9;CL:0000150!3.29e-07!9;CL:0002623!9.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.41e-24;42!CL:0002251;6.50e-19;20!CL:0002368;1.75e-17;13!CL:0002159;9.34e-17;14!CL:0000622;8.69e-13;5!CL:0000154;1.38e-10;6!CL:0002202;2.34e-09;9!CL:0002632;2.34e-09;9!CL:0002621;2.73e-09;3!CL:0002166;4.53e-09;3!CL:0002623;2.38e-08;3!CL:0000307;4.34e-08;3!CL:0002328;5.41e-08;3!CL:0002077;2.16e-07;34!CL:0000240;2.79e-07;6!CL:0000311;2.79e-07;6!CL:0000079;2.79e-07;6!CL:0000237;2.79e-07;6!CL:0000362;5.76e-07;9!CL:0000150;6.47e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.45e-31,42;CL:0000223,1.18e-22,58;CL:0002251,5.84e-19,20;CL:0002368,1.74e-17,13;CL:0000066,2.86e-17,253;CL:0002159,9.85e-17,14;CL:0000622,9.14e-13,5;CL:0000154,1.44e-10,6;CL:0000076,1.58e-09,63;CL:0002202,2.35e-09,9;CL:0002632,2.35e-09,9;CL:0002621,2.70e-09,3;CL:0002166,4.59e-09,3;CL:0002077,1.75e-08,34;CL:0002623,2.39e-08,3;CL:0000068,4.56e-08,3;CL:0000069,4.56e-08,3;CL:0000307,4.56e-08,3;CL:0000377,4.56e-08,3;CL:0002328,5.15e-08,3;CL:0000240,2.94e-07,6;CL:0000311,2.94e-07,6;CL:0000079,2.94e-07,6;CL:0000237,2.94e-07,6;CL:0000036,2.94e-07,6;CL:0000357,2.94e-07,6;CL:0000114,2.94e-07,6;CL:0000362,6.15e-07,9;CL:0000150,6.64e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;8.19e-12;58!CL:0000377;4.34e-08;3!CL:0000357;2.79e-07;6!CL:0000114;2.79e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!5.61e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.98e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.77e-19,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.69e-17!169;UBERON:0000925!2.69e-17!169;UBERON:0006595!2.69e-17!169;UBERON:0000166!6.08e-16!21;UBERON:0000161!1.38e-15!35;UBERON:0001004!7.67e-15!72;UBERON:0000165!7.13e-13!28;UBERON:0000930!7.13e-13!28;UBERON:0000974!3.78e-11!10;UBERON:0001007!4.28e-11!155;UBERON:0001555!4.28e-11!155;UBERON:0007026!4.28e-11!155;UBERON:0003102!3.01e-10!95;UBERON:0003729!3.61e-10!5;UBERON:0000344!1.67e-09!12;UBERON:0004921!3.62e-09!129;UBERON:0004185!3.62e-09!129;UBERON:0000365!4.69e-09!5;UBERON:0000065!2.70e-08!53;UBERON:0003343!2.96e-08!4;UBERON:0004785!2.96e-08!4;UBERON:0006562!6.08e-08!11;UBERON:0000077!7.50e-08!130;UBERON:0001444!7.69e-08!48;UBERON:0007196!1.50e-07!14;UBERON:0001558!1.50e-07!14;UBERON:0005910!1.80e-07!6;UBERON:0001949!1.80e-07!3;UBERON:0001723!4.94e-07!3;UBERON:0001033!4.94e-07!3;UBERON:0010056!4.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.50e-15;28!UBERON:0000974;1.52e-14;6!UBERON:0000161;1.73e-14;19!UBERON:0000166;1.73e-14;19!UBERON:0000344;1.41e-13;20!UBERON:0003729;6.42e-12;13!UBERON:0003343;2.62e-10;4!UBERON:0004785;2.62e-10;4!UBERON:0000486;1.62e-09;12!UBERON:0001949;2.73e-09;3!UBERON:0007196;3.72e-09;15!UBERON:0001558;3.72e-09;15!UBERON:0001723;1.03e-08;3!UBERON:0001033;1.03e-08;3!UBERON:0003126;1.48e-08;7!UBERON:0001005;1.48e-08;7!UBERON:0004815;5.41e-08;3!UBERON:0002031;5.41e-08;3!UBERON:0001555;5.76e-08;54!UBERON:0000365;1.09e-07;5!UBERON:0000153;2.51e-07;54!UBERON:0007811;2.63e-07;52!UBERON:0001708;7.18e-07;4!UBERON:0008895;7.18e-07;4!UBERON:0001004;9.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.88e-19,74;UBERON:0000166,1.77e-17,22;UBERON:0004119,3.95e-16,160;UBERON:0000925,3.95e-16,160;UBERON:0006595,3.95e-16,160;UBERON:0000153,6.18e-16,62;UBERON:0007811,6.18e-16,62;UBERON:0000161,8.67e-15,36;UBERON:0000165,1.09e-14,29;UBERON:0000930,1.09e-14,29;UBERON:0000974,2.41e-14,10;UBERON:0003102,2.84e-14,99;UBERON:0000344,1.42e-13,20;UBERON:0000033,4.28e-12,56;UBERON:0003729,6.28e-12,13;UBERON:0000065,1.13e-11,54;UBERON:0001007,1.04e-10,145;UBERON:0001555,1.04e-10,145;UBERON:0007026,1.04e-10,145;UBERON:0003343,2.56e-10,4;UBERON:0004785,2.56e-10,4;UBERON:0006562,2.70e-10,11;UBERON:0001444,1.00e-09,49;UBERON:0001949,2.70e-09,3;UBERON:0007196,3.81e-09,15;UBERON:0001558,3.81e-09,15;UBERON:0001723,1.00e-08,3;UBERON:0001033,1.00e-08,3;UBERON:0010056,1.00e-08,3;UBERON:0001042,1.14e-08,10;UBERON:0009145,1.14e-08,10;UBERON:0003126,1.58e-08,7;UBERON:0001005,1.58e-08,7;UBERON:0000072,3.69e-08,47;UBERON:0004815,5.15e-08,3;UBERON:0002031,5.15e-08,3;UBERON:0008814,5.68e-08,18;UBERON:0004921,5.79e-08,118;UBERON:0000365,1.03e-07,5;UBERON:0001041,3.90e-07,87;UBERON:0001708,7.26e-07,4;UBERON:0008895,7.26e-07,4 | |||
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| ||
|short_description=p2@DSG3 | |||
}} | }} |
Latest revision as of 04:59, 19 September 2015
Short description: | p2@DSG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_NM_001944, uc002kws.2_5end |
EntrezGene: | DSG3 |
HGNC: | 3050 |
UniProt: | P32926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.77e-19 | 14 |