FFCP PHASE1:Hg19::chr17:76850998..76851023,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:76850998..76851023,- to FFCP PHASE1:Hg19::chr17:76850998..76851023,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-128bp_to_AL110197_5end | |||
|cluster_id=chr17:76850998..76851023,- | |||
|coexpression_cluster_id=C1793 | |||
|description=CAGE_peak_7_at_TIMP2_5end | |||
|id=chr17:76850998..76851023,- | |||
|ontology_enrichment_celltype=CL:0000055!3.05e-17!180;CL:0000057!2.00e-10!75;CL:0000183!3.76e-08!59;CL:0000192!7.16e-08!42;CL:0000514!7.16e-08!42;CL:0000222!2.61e-07!119;CL:0000680!6.10e-07!57;CL:0000056!6.10e-07!57;CL:0000355!6.10e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.22e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.35e-11,76;CL:0002334,1.72e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.77e-10!659;UBERON:0000467!4.08e-09!625;UBERON:0000480!6.29e-09!626;UBERON:0005256!1.57e-08!143;UBERON:0000475!1.93e-08!365;UBERON:0004923!2.44e-08!57;UBERON:0004872!5.36e-08!84;UBERON:0000914!2.35e-07!83;UBERON:0002329!2.35e-07!83;UBERON:0003077!2.35e-07!83;UBERON:0003059!2.35e-07!83;UBERON:0007282!2.35e-07!83;UBERON:0009618!2.35e-07!83;UBERON:0007285!2.35e-07!83;UBERON:0002385!6.22e-07!63;UBERON:0001015!6.22e-07!63;UBERON:0000383!6.22e-07!63;UBERON:0004290!6.73e-07!70;UBERON:0002100!9.96e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.67e-07;9!UBERON:0000042;2.67e-07;9!UBERON:0003688;3.90e-07;6!UBERON:0002358;3.90e-07;6!UBERON:0003684;3.90e-07;6!UBERON:0001178;3.90e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,4.86e-09,66;UBERON:0004872,1.89e-07,83;UBERON:0002199,2.69e-07,46;UBERON:0002416,2.69e-07,46;UBERON:0004457,5.17e-07,12;UBERON:0000042,5.17e-07,12;UBERON:0003688,5.34e-07,6;UBERON:0002358,5.34e-07,6;UBERON:0003684,5.34e-07,6;UBERON:0001178,5.34e-07,6 | |||
|phase1_expression=15.6243406172679,5.35251309727458,14.9411668341729,2.00146596706261,6.70441641640932,1.74467704820074,7.59899634504932,24.0053551902196,12.5369101535922,0,0,0.436882744260345,0.263766978228454,1.11389717664042,0.994192127183747,0.672325146451775,0.602694528023977,0,1.46379839637152,0.246242116153576,0.816002764977012,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,2.23915474239924,2.59114932815184,1.54545340580512,0.872389432677388,0.377875943688809,0.485168122375632,0.464858073811369,0,0,0,0.512321413058201,0,0.344745680736619,0,0,1.12945403725563,0.818718450173537,0.674170453335254,0.612167784741805,0.962787081228281,0.639337125799041,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0,0.44931452458598,0.150176892841506,0.32145117339416,0,0.39783335439818,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,1.80719576192283,7.01873074890245,3.0417768981773,8.74814541756209,0.486634870302636,0.472674085820339,0,0.351339142772504,2.5540919722054,0,0,0,0.174129737299267,0.797747763113191,0,0,0,0.198762407366705,0,0.347140501607594,0,2.09749718104953,0,0.626984899610432,0.516833518338658,0,1.67360306382335,4.02829317109147,2.28081631715554,2.68468263302986,0.735326160691737,0,0.803697554556718,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,2.5326102332916,0.264818361626438,8.60509862246441,1.41867352879343,0,1.06748995729705,1.97334038733728,4.04574346019696,0.538842688278752,0.653847612453835,2.11900398702904,1.15235184896,0.70296429550139,4.05808099879417,1.71141546463335,2.24173020827702,0.352303495931295,0,0,0.61246251376468,0.245668634623536,2.06651562351531,4.75201142912821,3.95627086845691,6.37112953356618,2.15585442544872,0.505008341862199,0.375355559615893,1.10825646193673,0.877955241761676,1.5324389789951,1.80285670687916,0.113432183160021,1.25572744982203,2.13557388818567,1.90738711043606,0,2.06105058476878,1.03056216018252,4.83903826462134,1.0126579934476,2.33848812386877,0,2.30124746605748,2.58633690910099,3.19508633264953,1.61203357164224,1.52604533079439,0,0,0,0,0,0,0.207322110030741,0,0,0,2.57296375277154,2.76269842704961,1.39310378409594,1.44375896333917,0.118306800039844,0,0,0.110293972732394,0,0,0,0.392442930250692,0,1.4763109092493,4.20725321410337,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0.491953754172454,0,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,0,1.44331342025273,0.231860809950154,0.234817388471643,0.866198686566443,0,1.14152491340759,0,0,0.738651018262192,0.702012795417713,1.0404181360211,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.720599767084807,0.37872730027914,2.15892840593375,19.4814097034722,49.2313278282197,18.8179690624976,3.90744472272629,2.70308752059526,3.42991719156694,1.23344192779897,0.87192013766656,0.22001485746285,2.71470603091333,0,0,17.2859775780166,6.24044621468197,0.257207374262142,0,0.266422179016099,1.00084595560703,1.08524321078289,0,0.325736184293735,1.77695974371273,0.791951872933429,3.91871190177462,2.61460037580088,3.79897366491817,2.43247561282381,1.50677127429638,6.32501818449095,2.15662369942424,4.59447743336456,0,1.15825045334063,0.821905290201534,0.716243852959582,0,0,0,0,11.6883527142333,7.8083912314573,0,0.167516265334349,0,2.99602809578873,2.99161459204025,2.48649308061621,0.981531933753119,0,0,0.623912584592421,1.07057393278297,0.946214490203608,0.234282829985426,8.42649079237613,22.7407504055985,7.24311499047534,0,0.553107505625109,6.16873662723388,8.2236486134351,5.49029478097369,0.206768026122887,0.431428401637234,0.320182673410333,4.24378600024763,3.32870879020994,0.30239029332968,15.3826840847642,1.07423381301644,4.2099014164961,14.3515847166385,9.21073048320066,6.4341568457443,2.96836132889982,0.462629081407967,3.01854933032316,3.69572202062141,3.11552657510173,1.16210378459959,0.966875596732978,0.601519410909855,0.368323955743585,1.03333003348146,0.910455840033585,3.01586154406675,0.902399225814824,0.385076685522074,0.784349769176855,1.46139224653261,0.211103257785751,0,0.680374821106063,0,4.62681758070868,2.43851793789468,3.01013864312912,0,0,0.447749509444357,0,0,1.02580050046556,7.21632220539353,6.50756789328606,4.32772248920434,0.183138929636687,0.41254749960294,1.14853107599234,0,6.42735719376638,5.51023094265095,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,0.290033387828457,0.255679882248303,2.04773681987496,0.165284915360978,0,0,0,0.464845549297286,5.98143458978216,1.3940745403212,1.54016790088044,2.66153015158511,0.869932992075073,11.490101584443,0.143124886741991,1.48863347743867,1.58189712359363,0.953150969619124,0.767693373934002,0.42793898803392,4.13664222303718,1.56989728039846,0.899362287916574,1.37268514868027,0.353437207037059,2.62837226045311,1.58510321173008,0,0,0.48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| ||
|short_description=p7@TIMP2 | |||
}} | }} |
Latest revision as of 23:11, 17 September 2015
Short description: | p7@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TIMP2_5end |
Coexpression cluster: | C1793_Osteoblast_Melanocyte_Preadipocyte_Adipocyte_Mesenchymal_Fibroblast_chorionic |
Association with transcript: | -128bp_to_AL110197_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.35e-11 | 76 |
preadipocyte | 1.72e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 4.86e-09 | 66 |
splanchnic layer of lateral plate mesoderm | 1.89e-07 | 83 |
integument | 2.69e-07 | 46 |
integumental system | 2.69e-07 | 46 |
cavity lining | 5.17e-07 | 12 |
serous membrane | 5.17e-07 | 12 |
omentum | 5.34e-07 | 6 |
peritoneum | 5.34e-07 | 6 |
abdominal cavity | 5.34e-07 | 6 |
visceral peritoneum | 5.34e-07 | 6 |