FFCP PHASE1:Hg19::chr17:73827392..73827410,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:73827392..73827410,- to FFCP PHASE1:Hg19::chr17:73827392..73827410,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73827392..73827410,- | |||
|description=CAGE_peak_at_chr17:73827392..73827410,- | |||
|id=chr17:73827392..73827410,- | |||
|ontology_enrichment_celltype=CL:0000990!5.17e-20!8;CL:0002322!2.01e-19!5;CL:0000451!3.55e-16!10;CL:0000763!9.85e-14!112;CL:0000049!9.85e-14!112;CL:0000039!2.47e-13!7;CL:0000586!2.47e-13!7;CL:0000453!2.09e-12!5;CL:0000557!5.49e-12!71;CL:0000875!6.63e-12!3;CL:0002396!6.63e-12!3;CL:0000766!7.53e-11!76;CL:0000839!1.04e-10!70;CL:0002009!1.83e-10!65;CL:0000840!1.91e-10!5;CL:0001029!1.91e-10!5;CL:0002194!1.97e-09!63;CL:0000576!1.97e-09!63;CL:0000040!1.97e-09!63;CL:0000559!1.97e-09!63;CL:0000738!5.83e-08!140;CL:0000037!1.04e-07!172;CL:0000566!1.04e-07!172;CL:0002032!1.78e-07!165;CL:0000837!1.78e-07!165;CL:0000988!5.66e-07!182;CL:0002393!9.83e-07!9;CL:0002397!9.83e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.64e-42;5!CL:0000990;9.25e-24;8!CL:0000451;1.64e-19;10!CL:0002321;1.95e-14;15!CL:0000453;1.76e-11;5!CL:0000235;7.58e-10;6!CL:0000840;7.58e-10;5!CL:0000039;1.03e-08;7!CL:0000586;1.03e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.19e-42,5;CL:0000990,1.44e-23,8;CL:0000451,2.35e-19,10;CL:0000453,2.17e-11,5;CL:0000235,8.11e-10,6;CL:0000840,8.86e-10,5;CL:0001029,8.86e-10,5;CL:0000039,1.01e-08,7;CL:0000586,1.01e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.50e-10!80;UBERON:0001474!3.42e-09!86;UBERON:0002390!4.20e-09!102;UBERON:0003061!4.20e-09!102;UBERON:0002193!6.77e-08!112;UBERON:0000473!8.78e-08!8;UBERON:0004765!3.02e-07!101;UBERON:0001434!3.02e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.80e-08;2!UBERON:0002173;6.80e-08;2!UBERON:0002186;6.80e-08;2!UBERON:0000473;9.87e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.15e-08,2;UBERON:0002173,6.15e-08,2;UBERON:0002186,6.15e-08,2;UBERON:0000473,9.71e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0,0,0,0,1.42506371870624,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59637914923747,1.0447784237956,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17131635936948,1.06023814657188,1.85910308591229,1.7622379352613,0.756962552626885,1.82488679537915,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,1.19578356282027,1.14495775979091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14176542458162,0.801652215796681,3.40011128278926,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0,0,0,0,1.42506371870624,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59637914923747,1.0447784237956,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17131635936948,1.06023814657188,1.85910308591229,1.7622379352613,0.756962552626885,1.82488679537915,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,1.19578356282027,1.14495775979091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14176542458162,0.801652215796681,3.40011128278926,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:73827392..73827410,- | |||
}} | }} |
Latest revision as of 21:13, 25 July 2015
Short description: | p@chr17:73827392..73827410, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73827392..73827410, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.19e-42 | 5 |
conventional dendritic cell | 1.44e-23 | 8 |
dendritic cell | 2.35e-19 | 10 |
Langerhans cell | 2.17e-11 | 5 |
macrophage | 8.11e-10 | 6 |
immature conventional dendritic cell | 8.86e-10 | 5 |
common dendritic progenitor | 8.86e-10 | 5 |
germ line cell | 1.01e-08 | 7 |
germ cell | 1.01e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.15e-08 | 2 |
alveolar duct | 6.15e-08 | 2 |
bronchiole | 6.15e-08 | 2 |
testis | 9.71e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.15e-08 | 2 |