FFCP PHASE1:Hg19::chr17:7308032..7308049,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7308032..7308049,+ to FFCP PHASE1:Hg19::chr17:7308032..7308049,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7308032..7308049,+ | |||
|description=CAGE_peak_at_chr17:7308032..7308049,+ | |||
|id=chr17:7308032..7308049,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.96e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.89e-16!94;UBERON:0001016!6.89e-16!94;UBERON:0001017!9.72e-15!82;UBERON:0005743!2.55e-14!86;UBERON:0000924!3.82e-13!173;UBERON:0006601!3.82e-13!173;UBERON:0004121!1.05e-12!169;UBERON:0000475!1.86e-12!365;UBERON:0000955!2.09e-12!69;UBERON:0006238!2.09e-12!69;UBERON:0000033!4.83e-12!123;UBERON:0002346!8.67e-12!90;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0000153!1.57e-10!129;UBERON:0007811!1.57e-10!129;UBERON:0001049!2.09e-10!57;UBERON:0005068!2.09e-10!57;UBERON:0006241!2.09e-10!57;UBERON:0007135!2.09e-10!57;UBERON:0000468!7.82e-10!659;UBERON:0000481!9.87e-10!347;UBERON:0002616!1.71e-09!59;UBERON:0000477!8.94e-08!286;UBERON:0000119!9.81e-08!312;UBERON:0000483!3.91e-07!309;UBERON:0003056!4.58e-07!61;UBERON:0000922!6.26e-07!612;UBERON:0000467!8.10e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.59e-07;5!UBERON:0002216;1.59e-07;5!UBERON:0011134;1.59e-07;5!UBERON:0002209;1.59e-07;5!UBERON:0002213;1.59e-07;5!UBERON:0007844;1.59e-07;5!UBERON:0011138;1.59e-07;5!UBERON:0001130;1.59e-07;5!UBERON:0001066;1.59e-07;5!UBERON:0001468;1.59e-07;5!UBERON:0004732;2.18e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-10,81;UBERON:0001016,1.08e-09,89;UBERON:0003076,2.69e-09,15;UBERON:0003057,2.69e-09,15;UBERON:0011135,6.03e-08,5;UBERON:0002216,6.03e-08,5;UBERON:0011134,6.03e-08,5;UBERON:0002209,6.03e-08,5;UBERON:0002213,6.03e-08,5;UBERON:0005856,6.03e-08,5;UBERON:0005866,6.03e-08,5;UBERON:0005863,6.03e-08,5;UBERON:0007844,6.03e-08,5;UBERON:0011138,6.03e-08,5;UBERON:0001130,6.03e-08,5;UBERON:0001066,6.03e-08,5;UBERON:0001468,6.03e-08,5;UBERON:0004732,1.15e-07,13;UBERON:0003075,1.43e-07,82;UBERON:0007284,1.43e-07,82;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0004121,5.13e-07,171;UBERON:0000924,5.13e-07,171;UBERON:0006601,5.13e-07,171;UBERON:0002346,6.98e-07,86 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0,1.36142988256051,1.98838425436749,0,1.20538905604795,0,0,2.09305798730539,1.83600622119828,2.19418305034661,1.14494394852423,0.410623275218653,0.753255837568817,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,2.50668955317945,0.579386075843295,0,0.486634870302636,0.378139268656271,0.886917589850256,1.05401742831751,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0,0.775250277507987,0,0,1.20848795132744,0,0.976248230192678,0.367663080345869,0,0.357198913136319,1.34717623575702,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,1.05927344650575,2.29469296599051,0.709336764396714,2.24271040056923,0,1.48000529050296,0.933633106199299,0.538842688278752,0.490385709340376,2.4217188423189,0,0.234321431833797,0,0.570471821544449,0.597794722207204,0.352303495931295,0.647491777472526,0.140450806702248,1.02077085627447,0.737005903870608,1.34323515528495,1.18800285728205,0.989067717114227,0,0.718618141816238,1.17835279767846,0.875829639103749,0.554128230968366,0.438977620880838,0.30648779579902,1.05166641234618,0,0.89694817844431,0.640672166455702,1.05965950579781,0,0.824420233907511,1.54584324027377,1.30281799432113,1.68776332241266,0.292311015483596,1.51460264546469,1.01254888506529,1.45481451136931,1.06502877754984,0.604512589365842,0.339121184620975,0,0,0.286804595389004,1.46368447355514,1.32529768321485,1.04574548582567,1.34759371519982,1.51392510525377,1.09493207722749,0,2.57296375277154,0,0.464367928031979,0,0.473227200159376,0.505754070234305,0.241011029883482,0.772057809126758,0,0.474541238222193,0.539325232640658,0.196221465125346,0,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.462942225792648,0.651616610620649,0,1.44331342025273,0.34779121492523,0.821860859650752,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0.317489471460845,0,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0.897048674762886,1.30788020649984,1.24675085895615,0.517086863031111,3.57656445851882,0,0.531876233169741,0,0.771622122786426,0,0.532844358032199,0.714889968290738,0,2.46972101034231,0.325736184293735,0.710783897485092,0,0,0,0.399891964728228,0,0,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,4.06551398755941,0,0.773288812777695,0.502548796003046,0,0,0,0,2.08575535922538,2.00068208423871,1.62759014219841,0.831883446123229,0.892144943985809,0.630809660135739,1.7571212248907,1.20378439891088,0,0,1.32845119707087,0.368738337083406,1.21637060255316,3.32861967686659,4.11772108573027,0,0,0,0,0,0.30239029332968,0.744323423456331,0.460385919864187,0.561320188866147,0.384417447767103,0,0.965123526861645,1.48418066444991,0,0.355123450626254,0.492762936082855,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0.459257792658427,0.728364672026868,0.262248829918848,0,0.0770153371044148,0,0,0.422206515571503,1.13733384070897,0.340187410553031,0.647747748306418,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0.366277859273374,0.82509499920588,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.966782203814463,1.0151168573996,0.255679882248303,0.801288320820636,0,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,0.62962469366128,0.6970372701606,0.924100740528266,0.532306030317022,0,0.55597265731176,0.286249773483982,0.372158369359667,0.632758849437452,0.571890581771475,0.511795582622668,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0,0.589062011728432,0.404364963146632,0,0,0.48763373908959,0.731140468893853,0,0.409499734223957,0.424216295861138,0,2.2054613741845,0,0,1.15755106853338,0,0.811641507850816,0,0.563391205064483,1.14729081763241,0.392996164052485,0.35667105148125,0,0.211107635297664,0.987884678879706,1.51789269506286,2.79947776195986,0.384888450902048,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,2.13648142254946,0.962479855263359,1.47024129588619,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0.293016358543788,0.970884173996107,0.334330152832435,1.13654458722565,0,0.593929361665277,0.921482106297696,0,0.56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| ||
|short_description=p@chr17:7308032..7308049,+ | |||
}} | }} |
Latest revision as of 21:00, 25 July 2015
Short description: | p@chr17:7308032..7308049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7308032..7308049, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.26e-10 | 81 |
nervous system | 1.08e-09 | 89 |
posterior neural tube | 2.69e-09 | 15 |
chordal neural plate | 2.69e-09 | 15 |
intervertebral cartilage | 6.03e-08 | 5 |
symphysis | 6.03e-08 | 5 |
nonsynovial joint | 6.03e-08 | 5 |
fibrous joint | 6.03e-08 | 5 |
cartilaginous joint | 6.03e-08 | 5 |
developing mesenchymal condensation | 6.03e-08 | 5 |
pre-cartilage condensation | 6.03e-08 | 5 |
cartilaginous condensation | 6.03e-08 | 5 |
cartilage element | 6.03e-08 | 5 |
post-cranial axial skeletal system | 6.03e-08 | 5 |
vertebral column | 6.03e-08 | 5 |
intervertebral disk | 6.03e-08 | 5 |
intervertebral joint | 6.03e-08 | 5 |
segmental subdivision of nervous system | 1.15e-07 | 13 |
neural plate | 1.43e-07 | 82 |
presumptive neural plate | 1.43e-07 | 82 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
ectoderm-derived structure | 5.13e-07 | 171 |
ectoderm | 5.13e-07 | 171 |
presumptive ectoderm | 5.13e-07 | 171 |
neurectoderm | 6.98e-07 | 86 |