FFCP PHASE1:Hg19::chr17:6544372..6544386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:6544372..6544386,+ to FFCP PHASE1:Hg19::chr17:6544372..6544386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84817 | |EntrezGene=84817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28218 | |HGNC=28218 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRA2 | |UniProt=Q9BRA2 | ||
|association_with_transcript=150bp_to_NM_032731,uc002gdf.3_5end | |||
|cluster_id=chr17:6544372..6544386,+ | |||
|coexpression_cluster_id=C3668 | |||
|description=CAGE_peak_1_at_TXNDC17_5end | |||
|id=chr17:6544372..6544386,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.20e-37!679;CL:0000004!1.20e-37!679;CL:0000255!1.20e-37!679;CL:0000012!1.79e-36!682;CL:0000066!4.49e-33!254;CL:0002321!1.07e-27!248;CL:0000220!1.32e-27!246;CL:0000003!3.39e-26!722;CL:0000144!1.22e-20!625;CL:0000063!3.96e-18!578;CL:0002371!5.17e-18!591;CL:0000222!7.81e-14!119;CL:0000223!3.68e-11!59;CL:0000076!2.67e-10!62;CL:0000055!7.95e-10!180;CL:0002076!1.19e-09!43;CL:0002368!3.84e-08!13;CL:0000680!5.45e-08!57;CL:0000056!5.45e-08!57;CL:0000355!5.45e-08!57;CL:0000393!5.74e-08!60;CL:0000211!5.74e-08!60;CL:0000183!2.03e-07!59;CL:0000187!2.11e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.89e-08;13!CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.65e-33,253;CL:0002321,6.09e-28,250;CL:0000222,5.34e-14,121;CL:0000223,8.07e-11,58;CL:0000076,1.25e-10,63;CL:0002076,2.64e-09,42;CL:0002368,3.84e-08,13;CL:0000680,9.25e-08,58;CL:0000056,9.25e-08,58;CL:0000355,9.25e-08,58;CL:0000393,9.55e-08,61;CL:0000211,9.55e-08,61;CL:0000187,3.52e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.66e-12!239;DOID:162!2.08e-11!235;DOID:305!3.27e-08!106;DOID:0050687!4.93e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.66e-12,239;DOID:162,2.08e-11,235;DOID:305,3.27e-08,106;DOID:0050687,4.93e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.56e-13!238;UBERON:0009142!2.56e-13!238;UBERON:0000490!1.16e-11!138;UBERON:0002100!1.80e-11!216;UBERON:0005256!7.24e-11!143;UBERON:0003914!1.75e-10!118;UBERON:0000486!1.07e-08!82;UBERON:0000914!5.56e-07!83;UBERON:0002329!5.56e-07!83;UBERON:0003077!5.56e-07!83;UBERON:0003059!5.56e-07!83;UBERON:0007282!5.56e-07!83;UBERON:0009618!5.56e-07!83;UBERON:0007285!5.56e-07!83;UBERON:0002049!5.82e-07!79;UBERON:0007798!5.82e-07!79;UBERON:0004119!6.18e-07!169;UBERON:0000925!6.18e-07!169;UBERON:0006595!6.18e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.18e-12,148;UBERON:0002100,1.02e-11,199;UBERON:0003914,1.17e-10,117;UBERON:0005256,2.06e-09,122;UBERON:0000486,1.67e-08,83;UBERON:0003104,3.61e-08,160;UBERON:0009142,3.61e-08,160;UBERON:0007503,4.79e-08,78;UBERON:0004119,4.92e-07,160;UBERON:0000925,4.92e-07,160;UBERON:0006595,4.92e-07,160;UBERON:0002049,6.86e-07,78;UBERON:0007798,6.86e-07,78 | |||
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|short_description=p1@TXNDC17 | |||
}} | }} |
Latest revision as of 22:12, 16 September 2015
Short description: | p1@TXNDC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TXNDC17_5end |
Coexpression cluster: | C3668_Mallassezderived_Prostate_Urothelial_Bronchial_Gingival_Small_Esophageal |
Association with transcript: | 150bp_to_NM_032731, uc002gdf.3_5end |
EntrezGene: | TXNDC17 |
HGNC: | 28218 |
UniProt: | Q9BRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.65e-33 | 253 |
embryonic cell | 6.09e-28 | 250 |
mesodermal cell | 5.34e-14 | 121 |
endodermal cell | 8.07e-11 | 58 |
squamous epithelial cell | 1.25e-10 | 63 |
endo-epithelial cell | 2.64e-09 | 42 |
respiratory epithelial cell | 3.84e-08 | 13 |
muscle precursor cell | 9.25e-08 | 58 |
myoblast | 9.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.25e-08 | 58 |
electrically responsive cell | 9.55e-08 | 61 |
electrically active cell | 9.55e-08 | 61 |
muscle cell | 3.52e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 3.18e-12 | 148 |
trunk | 1.02e-11 | 199 |
epithelial tube | 1.17e-10 | 117 |
trunk mesenchyme | 2.06e-09 | 122 |
multilaminar epithelium | 1.67e-08 | 83 |
mesenchyme | 3.61e-08 | 160 |
entire embryonic mesenchyme | 3.61e-08 | 160 |
epithelial vesicle | 4.79e-08 | 78 |
endoderm-derived structure | 4.92e-07 | 160 |
endoderm | 4.92e-07 | 160 |
presumptive endoderm | 4.92e-07 | 160 |
vasculature | 6.86e-07 | 78 |
vascular system | 6.86e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.66e-12 | 239 |
cancer | 2.08e-11 | 235 |
carcinoma | 3.27e-08 | 106 |
cell type cancer | 4.93e-07 | 143 |