FFCP PHASE1:Hg19::chr17:56605257..56605272,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:56605257..56605272,- to FFCP PHASE1:Hg19::chr17:56605257..56605272,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5414 | |EntrezGene=5414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9165 | |HGNC=9165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_uc010wnw.1_5end | |||
|cluster_id=chr17:56605257..56605272,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_SEPT4_5end | |||
|id=chr17:56605257..56605272,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.73e-14;1!UBERON:0006601;4.56e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.40e-94!57;UBERON:0005068!2.40e-94!57;UBERON:0006241!2.40e-94!57;UBERON:0007135!2.40e-94!57;UBERON:0002616!4.17e-80!59;UBERON:0000955!3.00e-76!69;UBERON:0006238!3.00e-76!69;UBERON:0001017!5.38e-76!82;UBERON:0005743!3.15e-72!86;UBERON:0001893!2.67e-65!34;UBERON:0002020!6.73e-65!34;UBERON:0003528!6.73e-65!34;UBERON:0000073!6.90e-65!94;UBERON:0001016!6.90e-65!94;UBERON:0003075!1.41e-64!86;UBERON:0007284!1.41e-64!86;UBERON:0002780!2.12e-64!41;UBERON:0001890!2.12e-64!41;UBERON:0006240!2.12e-64!41;UBERON:0003080!8.90e-63!42;UBERON:0002346!1.94e-61!90;UBERON:0002791!4.74e-61!33;UBERON:0001869!6.30e-57!32;UBERON:0007023!1.50e-53!115;UBERON:0000033!4.93e-43!123;UBERON:0003056!6.96e-42!61;UBERON:0000153!9.55e-41!129;UBERON:0007811!9.55e-41!129;UBERON:0002619!3.03e-40!22;UBERON:0001950!3.55e-38!20;UBERON:0000956!2.99e-35!25;UBERON:0000203!2.99e-35!25;UBERON:0002308!1.41e-34!9;UBERON:0000125!1.41e-34!9;UBERON:0004121!1.53e-33!169;UBERON:0000924!1.28e-32!173;UBERON:0006601!1.28e-32!173;UBERON:0003076!1.06e-31!15;UBERON:0003057!1.06e-31!15;UBERON:0002298!2.95e-30!8;UBERON:0000200!1.95e-29!6;UBERON:0004733!9.70e-26!12;UBERON:0002028!9.70e-26!12;UBERON:0007277!9.70e-26!12;UBERON:0009663!2.38e-25!7;UBERON:0004732!1.15e-23!13;UBERON:0000025!2.82e-23!194;UBERON:0002420!1.33e-19!9;UBERON:0007245!1.33e-19!9;UBERON:0010009!1.33e-19!9;UBERON:0010011!1.33e-19!9;UBERON:0000454!1.33e-19!9;UBERON:0004111!2.09e-17!241;UBERON:0001896!5.41e-16!3;UBERON:0005290!5.41e-16!3;UBERON:0010096!5.41e-16!3;UBERON:0000988!5.99e-16!3;UBERON:0006331!1.10e-15!3;UBERON:0002771!5.99e-15!3;UBERON:0000477!1.10e-14!286;UBERON:0002680!8.59e-14!9;UBERON:0001895!8.59e-14!9;UBERON:0010092!8.59e-14!9;UBERON:0000064!4.24e-13!219;UBERON:0000483!4.32e-13!309;UBERON:0000119!6.75e-13!312;UBERON:0000369!5.84e-12!4;UBERON:0002435!5.84e-12!4;UBERON:0000204!5.84e-12!4;UBERON:0010082!5.84e-12!4;UBERON:0000475!7.39e-12!365;UBERON:0001870!2.44e-11!2;UBERON:0002148!3.88e-11!2;UBERON:0009662!3.88e-11!2;UBERON:0001875!4.08e-11!2;UBERON:0006514!4.08e-11!2;UBERON:0002021!3.67e-10!5;UBERON:0001871!5.12e-10!7;UBERON:0001872!1.43e-09!5;UBERON:0002240!1.34e-07!3;UBERON:0005383!1.48e-07!3;UBERON:0005382!1.48e-07!3;UBERON:0000062!5.43e-07!511;UBERON:0002336!7.49e-07!1;UBERON:0001018!7.49e-07!1;UBERON:0002473!7.49e-07!1;UBERON:0005340!7.49e-07!1;UBERON:0002316!7.49e-07!1;UBERON:0003544!7.49e-07!1;UBERON:0001020!7.49e-07!1;UBERON:0005970!7.49e-07!1;UBERON:0002437!7.49e-07!1;UBERON:0002022!8.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.65e-33;6!UBERON:0001893;8.51e-25;34!UBERON:0000073;7.13e-24;53!UBERON:0002616;7.13e-24;53!UBERON:0002780;4.02e-21;41!UBERON:0001890;4.02e-21;41!UBERON:0001869;4.63e-21;32!UBERON:0001950;5.48e-21;20!UBERON:0002619;3.84e-19;22!UBERON:0000955;6.16e-19;68!UBERON:0001017;3.47e-18;75!UBERON:0003528;8.48e-18;34!UBERON:0002020;8.48e-18;34!UBERON:0000988;1.78e-17;3!UBERON:0001896;1.78e-17;3!UBERON:0005290;1.78e-17;3!UBERON:0000956;6.63e-17;25!UBERON:0000203;6.63e-17;25!UBERON:0004733;8.91e-17;12!UBERON:0002028;8.91e-17;12!UBERON:0002791;7.00e-16;32!UBERON:0004732;1.64e-15;13!UBERON:0002336;3.07e-14;1!UBERON:0011215;3.07e-14;1!UBERON:0001018;3.07e-14;1!UBERON:0002473;3.07e-14;1!UBERON:0005340;3.07e-14;1!UBERON:0003544;3.07e-14;1!UBERON:0005970;3.07e-14;1!UBERON:0002316;3.07e-14;1!UBERON:0001020;3.07e-14;1!UBERON:0002437;3.07e-14;1!UBERON:0002581;9.72e-14;1!UBERON:0002902;9.72e-14;1!UBERON:0001882;9.72e-14;1!UBERON:0002022;9.72e-14;1!UBERON:0009899;9.72e-14;1!UBERON:0007190;9.72e-14;1!UBERON:0005403;9.72e-14;1!UBERON:0002021;4.90e-11;5!UBERON:0007023;1.14e-10;114!UBERON:0001016;2.66e-10;83!UBERON:0000200;3.27e-09;6!UBERON:0005162;9.24e-08;2!UBERON:0000122;9.24e-08;2!UBERON:0002148;1.64e-07;2!UBERON:0006331;1.64e-07;2!UBERON:0009662;1.64e-07;2 | |||
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|short_description=p9@SEPT4 | |||
}} | }} |
Latest revision as of 11:47, 16 September 2015
Short description: | p9@SEPT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEPT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 69bp_to_uc010wnw.1_5end |
EntrezGene: | SEPT4 |
HGNC: | 9165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data