FFCP PHASE1:Hg19::chr17:4619437..4619453,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4619437..4619453,+ to FFCP PHASE1:Hg19::chr17:4619437..4619453,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:4619437..4619453,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr17:4619437..4619453,+ | |||
|id=chr17:4619437..4619453,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.86e-39!76;CL:0000763!7.56e-35!112;CL:0000049!7.56e-35!112;CL:0000738!1.78e-34!140;CL:0002057!6.26e-34!42;CL:0000037!4.74e-33!172;CL:0000566!4.74e-33!172;CL:0000557!1.67e-32!71;CL:0002194!3.31e-32!63;CL:0000576!3.31e-32!63;CL:0000040!3.31e-32!63;CL:0000559!3.31e-32!63;CL:0000839!3.33e-32!70;CL:0000988!5.28e-32!182;CL:0002009!1.36e-31!65;CL:0002032!1.73e-31!165;CL:0000837!1.73e-31!165;CL:0000860!3.00e-31!45;CL:0002087!1.27e-26!119;CL:0002031!2.66e-26!124;CL:0002393!3.83e-08!9;CL:0002397!3.83e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-68;33!CL:0002057;3.27e-68;33!CL:0000473;2.43e-60;39!CL:0000234;2.43e-60;39!CL:0000576;1.94e-51;48!CL:0000766;1.38e-44;69!CL:0000763;2.83e-20;100!CL:0000094;1.40e-15;8!CL:0002393;1.50e-15;6!CL:0002397;1.50e-15;6!CL:0000738;8.64e-15;136!CL:0002087;2.21e-13;104!CL:0000081;5.00e-11;11!CL:0000775;2.59e-09;3!CL:0000988;4.06e-08;177!CL:0000767;4.40e-08;3!CL:0000875;7.56e-08;3!CL:0002396;7.56e-08;3!CL:0000235;3.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.60e-101,48;CL:0000234,3.60e-101,48;CL:0000860,1.93e-96,42;CL:0002057,1.93e-96,42;CL:0000766,5.80e-90,72;CL:0002194,2.00e-78,59;CL:0000576,2.00e-78,59;CL:0000040,2.00e-78,59;CL:0000559,2.00e-78,59;CL:0002009,1.72e-75,61;CL:0000839,2.90e-72,66;CL:0000557,5.16e-71,67;CL:0000763,2.67e-66,108;CL:0000049,2.67e-66,108;CL:0000738,5.51e-58,136;CL:0002032,1.12e-46,161;CL:0000837,1.12e-46,161;CL:0000037,6.83e-46,168;CL:0002087,5.58e-44,115;CL:0000988,8.48e-43,177;CL:0002031,1.28e-41,120;CL:0002393,2.51e-21,9;CL:0002397,2.51e-21,9;CL:0000134,2.77e-16,354;CL:0000094,6.19e-16,8;CL:0002320,1.13e-15,361;CL:0000219,1.61e-13,386;CL:0000081,2.82e-11,11;CL:0000048,6.72e-11,427;CL:0000723,1.54e-10,433;CL:0000034,4.47e-10,441;CL:0000775,2.33e-09,3;CL:0000767,2.10e-08,3;CL:0000875,8.27e-08,3;CL:0002396,8.27e-08,3;CL:0000235,3.91e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.34e-70;42!CL:0000049;2.35e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.92e-34!102;UBERON:0003061!9.92e-34!102;UBERON:0002193!3.84e-30!112;UBERON:0002371!9.60e-28!80;UBERON:0001474!2.74e-26!86;UBERON:0004765!2.54e-20!101;UBERON:0001434!2.54e-20!101;UBERON:0002405!9.99e-19!115;UBERON:0000178!4.69e-08!15;UBERON:0000179!4.69e-08!15;UBERON:0000463!4.69e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.13e-61,76;UBERON:0002390,1.45e-56,98;UBERON:0003061,1.45e-56,98;UBERON:0001474,6.86e-56,82;UBERON:0002193,3.93e-50,108;UBERON:0004765,7.23e-50,90;UBERON:0002405,7.11e-48,93;UBERON:0001434,1.10e-43,100;UBERON:0003081,7.19e-23,203;UBERON:0002204,2.29e-21,167;UBERON:0002384,7.75e-15,371;UBERON:0000926,3.67e-10,315;UBERON:0004120,3.67e-10,315;UBERON:0006603,3.67e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,1.96682138424452,1.91914699048606,2.63187409637329,0,0,0,0,0.142169232487422,0.293600439334847,2.21598163412751,2.00544447470142,1.08505435357926,0.895661896959697,0.971680998056939,0.77272670290256,6.39752250630085,5.29026321164333,3.15359279544161,6.50801303335917,6.16751832032739,0.929119112685311,6.61692502340946,7.17249978281482,7.09446689665756,2.75796544589295,3.87290810150296,1.35426486594342,6.40023954444856,6.27684145133045,5.16864014223695,4.89734227793444,4.49300637906531,2.55734850319616,7.91643120448119,9.57425556583833,7.6720455095885,3.48251086354301,2.8369261234557,0,6.02996796616184,5.21482918420201,7.38442071997397,3.02699751316684,3.31449872388808,3.79754864929061,3.16882929467913,4.46469029926591,2.09658645508376,2.80821577866238,3.60424542819615,4.66104201421532,1.14005097496499,1.79025009479181,1.27864907635244,1.75996244461323,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0.473447805734733,0,1.6711568532776,0,0.443067789167242,0.270803863765016,0.512365278902701,0.260118695119756,0.822189523018381,0,1.73881851441031,0.741432815810302,1.33770414044857,1.04535523804977,0.339928028092699,0.383220493601921,0.68725489096526,0,0.95569624297229,0,0,1.05402583354441,0.639933055772092,1.24930726552346,0.473554504088034,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0,0.649094787309367,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0.225222960966644,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.435758888184812,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,0,0.738651018262192,1.17002132569619,0.148631162288728,0,0,0,0,0,0,0,0.968532774145487,0.829312462163088,1.72943944100354,0.75745460055828,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0.871533458600294,0,2.43247561282381,2.51128545716063,4.21667878966063,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0.637938751653163,3.74503511973591,14.9580729602012,3.72973962092432,0,0,0,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0,0,0.195801157462741,0,0.206768026122887,1.72571360654893,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0.507447609232169,1.52927441428475,1.70894156152249,0.714695326373367,0.411362273086194,1.94541993357815,1.62009431171434,0.79312517629427,0.320472213382419,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.5745161103971,0.423347165447766,0.324621940274555,0.561594356226918,1.59764275323235,0,0,0.50787533340481,0.1605880751037,0.605399121573143,0.425846237690326,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0.852408440419239,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0.87754158861589,0.10893846351899,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0.533034776018635,1.02193298195737,0.156980256395025,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.617819694732514,0.313265848516366,0,0,0,0.547364367646998,0.19566461893209,0,0,0,1.53036380815245,0.126373159256976,0.300646838828985,0.518440956986236,0.664653872707185,0,0.313932918407225,0,0,0.693373365065693,0,0,0,0,0,0,0,0.0821154570532092,0,0.176512253383001,0,0,0.19871461170299,0.0633107959558787,0.391102765469606,0,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.687697182986169,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0.052454588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|short_description=p@chr17:4619437..4619453,+ | |||
}} | }} |
Latest revision as of 18:03, 25 July 2015
Short description: | p@chr17:4619437..4619453, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4619437..4619453, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.13e-61 | 76 |
hematopoietic system | 1.45e-56 | 98 |
blood island | 1.45e-56 | 98 |
bone element | 6.86e-56 | 82 |
hemolymphoid system | 3.93e-50 | 108 |
skeletal element | 7.23e-50 | 90 |
immune system | 7.11e-48 | 93 |
skeletal system | 1.10e-43 | 100 |
lateral plate mesoderm | 7.19e-23 | 203 |
musculoskeletal system | 2.29e-21 | 167 |
connective tissue | 7.75e-15 | 371 |
mesoderm | 3.67e-10 | 315 |
mesoderm-derived structure | 3.67e-10 | 315 |
presumptive mesoderm | 3.67e-10 | 315 |