FFCP PHASE1:Hg19::chr17:42635121..42635149,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42635121..42635149,+ to FFCP PHASE1:Hg19::chr17:42635121..42635149,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_AB590852_5end | |||
|cluster_id=chr17:42635121..42635149,+ | |||
|coexpression_cluster_id=C1781 | |||
|description=CAGE_peak_1_at_AB590852_5end | |||
|id=chr17:42635121..42635149,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.33e-16!180;CL:0000057!1.35e-11!75;CL:0000133!7.36e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000075;6.87e-09;27!CL:0000306;8.39e-09;4!CL:0002222;8.39e-09;4!CL:0002224;8.39e-09;4!CL:0000346;9.40e-09;3!CL:1000428;9.40e-09;3!CL:0000708;2.13e-08;3!CL:0000064;5.22e-07;3!CL:0000067;5.22e-07;3!CL:0005012;5.22e-07;3!CL:0002304;5.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,3.01e-09,27;CL:0000306,5.19e-09,4;CL:0002222,5.19e-09,4;CL:0002224,5.19e-09,4;CL:0000346,9.44e-09,3;CL:1000428,9.44e-09,3;CL:0000708,2.16e-08,3;CL:0000133,1.24e-07,59;CL:0000064,2.15e-07,3;CL:0000067,2.15e-07,3;CL:0005012,2.15e-07,3;CL:0002304,2.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.95e-08!11;UBERON:0002200!2.81e-08!11;UBERON:0006876!2.81e-08!11;UBERON:0001456!2.36e-07!21;UBERON:0000019!2.60e-07!19;UBERON:0000047!2.60e-07!19;UBERON:0004088!2.60e-07!19;UBERON:0003072!2.60e-07!19;UBERON:0003071!2.60e-07!19;UBERON:0004128!2.60e-07!19;UBERON:0000914!2.73e-07!83;UBERON:0002329!2.73e-07!83;UBERON:0003077!2.73e-07!83;UBERON:0003059!2.73e-07!83;UBERON:0007282!2.73e-07!83;UBERON:0009618!2.73e-07!83;UBERON:0007285!2.73e-07!83;UBERON:0005085!7.78e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.41e-11;11!UBERON:0006876;8.18e-10;11!UBERON:0010077;8.39e-09;4!UBERON:0005389;8.39e-09;4!UBERON:0000484;8.39e-09;4!UBERON:0000965;8.39e-09;4!UBERON:0001803;8.39e-09;4!UBERON:0000412;9.40e-09;3!UBERON:0001992;9.40e-09;3!UBERON:0001801;9.97e-09;14!UBERON:0005284;1.19e-08;5!UBERON:0001456;1.45e-08;21!UBERON:0003210;2.13e-08;3!UBERON:0000019;1.17e-07;19!UBERON:0000047;1.17e-07;19!UBERON:0004088;1.17e-07;19!UBERON:0010230;1.17e-07;19!UBERON:0010371;2.58e-07;31!UBERON:0000970;3.43e-07;20!UBERON:0001778;5.22e-07;3!UBERON:0001775;5.22e-07;3!UBERON:0002104;9.05e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.94e-11,11;UBERON:0006876,4.40e-10,11;UBERON:0001801,4.83e-09,14;UBERON:0010077,5.19e-09,4;UBERON:0005389,5.19e-09,4;UBERON:0000484,5.19e-09,4;UBERON:0002546,5.19e-09,4;UBERON:0000965,5.19e-09,4;UBERON:0001803,5.19e-09,4;UBERON:0003073,5.19e-09,4;UBERON:0005426,5.19e-09,4;UBERON:0000412,9.44e-09,3;UBERON:0001992,9.44e-09,3;UBERON:0005284,1.10e-08,5;UBERON:0003210,2.16e-08,3;UBERON:0001456,3.07e-08,22;UBERON:0005085,4.49e-08,31;UBERON:0001778,2.15e-07,3;UBERON:0001775,2.15e-07,3;UBERON:0000019,2.48e-07,20;UBERON:0000047,2.48e-07,20;UBERON:0010312,2.48e-07,20;UBERON:0004088,2.48e-07,20;UBERON:0010230,2.48e-07,20;UBERON:0003072,2.48e-07,20;UBERON:0004128,2.48e-07,20;UBERON:0003071,2.48e-07,20;UBERON:0000970,6.67e-07,21;UBERON:0002104,6.67e-07,21 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,2.00146596706261,1.78784437770915,0,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.492484232307152,2.65200898617529,0.313454721478088,0.286235987131057,1.23186982565596,1.12988375635323,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.32348744029695,1.99556457716308,1.66886092816939,0.130979075497713,0.364295288292542,0,0.324547393654683,0,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0.397227542439656,2.0078563452417,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0,0.163461903113459,3.78393569112329,4.60940739583999,1.64025002283658,0.312160076830321,0,0,0,1.13311061057692,0.98315564691574,0,1.59684612505298,0.103325781175765,1.18800285728205,1.48360157567134,0,0,0.841680569770331,1.00094815897571,0,0.438977620880838,0.919463387397059,1.05166641234618,0,1.07633781413317,0.640672166455702,0.211931901159562,0.900273288253207,0.412210116953756,0.515281080091258,0.18611685633159,0.337552664482532,0.584622030967192,0.504867548488229,0.460249493211497,1.45481451136931,0.710019185033229,0.604512589365842,1.3564847384839,0.193260853163297,0,0,1.21973706129595,0.530119073285941,0.929551542956147,1.86589899027667,1.51392510525377,0.36497735907583,4.69348596989448,10.2918550110862,6.90674606762403,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.686271241194102,0,0,0,0,3.25808305310325,0,1.44331342025273,1.62302566965108,1.76113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,5.04589879554123,2.61576041299968,3.00686971865895,0.129271715757778,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0.718874566474748,2.29723871668228,0,0,0.821905290201534,0.179060963239896,0.112085143993527,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0.981531933753119,1.00034104211935,3.25518028439683,1.87173775377726,3.21172179834891,0.946214490203608,1.05427273493442,0.902838299183157,0,2.0694614258501,1.99267679560631,0.184369168541703,0.781952530212746,10.3774613455252,9.26487244289311,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0.306923946576125,1.68396056659844,0.768834895534206,0,0.482561763430822,1.48418066444991,0.308419387605311,0.887808626565635,0.0821271560138091,0.519254429183621,0.348631135379878,0.241718899183244,0.200506470303285,0,0.459257792658427,1.45672934405374,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,0,0,0.895499018888713,0,0,1.02580050046556,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0.413509717453592,0.644521469209642,1.30515024522806,0.681813019328807,0.445160178233687,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0,0,8.18748412591268,3.79655309662471,0.571890581771475,1.79128453917934,1.71175595213568,0.318203247925937,0,0.719489830333259,2.19629623788844,0.824686816419805,0,0,0,0.48763373908959,0,0,0.545999645631943,0.989838023675989,1.13008116620243,0,0,0,1.73632660280006,2.62357900818653,0.405820753925408,0,0,0.143411352204052,0.392996164052485,0,0,0,0,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,4.91390727186376,0,0,0,0.28853842595289,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,1.90012867315194,0.19924798825107,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0.34823682632161,0.17472666824203,0.687944129886466,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.599428828746391,0,0,0.171594997861965,0,0.621262677827163,0,0,0,0.611989305817931,3.17845648891671,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0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| ||
|short_description=p1@AB590852 | |||
}} | }} |
Latest revision as of 17:27, 25 July 2015
Short description: | p1@AB590852 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB590852_5end |
Coexpression cluster: | C1781_anaplastic_Hair_Pericytes_mesothelioma_Fibroblast_lens_transitionalcell |
Association with transcript: | 65bp_to_AB590852_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 3.01e-09 | 27 |
crystallin accumulating cell | 5.19e-09 | 4 |
vertebrate lens cell | 5.19e-09 | 4 |
lens epithelial cell | 5.19e-09 | 4 |
hair follicle dermal papilla cell | 9.44e-09 | 3 |
stem cell of epidermis | 9.44e-09 | 3 |
leptomeningeal cell | 2.16e-08 | 3 |
neurectodermal cell | 1.24e-07 | 59 |
ciliated cell | 2.15e-07 | 3 |
ciliated epithelial cell | 2.15e-07 | 3 |
multi-ciliated epithelial cell | 2.15e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.94e-11 | 11 |
vasculature of organ | 4.40e-10 | 11 |
anterior segment of eyeball | 4.83e-09 | 14 |
cuboidal epithelium | 5.19e-09 | 4 |
transparent eye structure | 5.19e-09 | 4 |
simple cuboidal epithelium | 5.19e-09 | 4 |
cranial placode | 5.19e-09 | 4 |
lens of camera-type eye | 5.19e-09 | 4 |
epithelium of lens | 5.19e-09 | 4 |
lens placode | 5.19e-09 | 4 |
lens vesicle | 5.19e-09 | 4 |
dermal papilla | 9.44e-09 | 3 |
papillary layer of dermis | 9.44e-09 | 3 |
brain vasculature | 1.10e-08 | 5 |
blood-cerebrospinal fluid barrier | 2.16e-08 | 3 |
face | 3.07e-08 | 22 |
ectodermal placode | 4.49e-08 | 31 |
ciliary epithelium | 2.15e-07 | 3 |
ciliary body | 2.15e-07 | 3 |
camera-type eye | 2.48e-07 | 20 |
simple eye | 2.48e-07 | 20 |
immature eye | 2.48e-07 | 20 |
ocular region | 2.48e-07 | 20 |
eyeball of camera-type eye | 2.48e-07 | 20 |
optic cup | 2.48e-07 | 20 |
optic vesicle | 2.48e-07 | 20 |
eye primordium | 2.48e-07 | 20 |
eye | 6.67e-07 | 21 |
visual system | 6.67e-07 | 21 |