FFCP PHASE1:Hg19::chr17:41622765..41622821,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:41622765..41622821,- to FFCP PHASE1:Hg19::chr17:41622765..41622821,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc002idy.1_5end | |||
|cluster_id=chr17:41622765..41622821,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_2_at_ETV4_5end | |||
|id=chr17:41622765..41622821,- | |||
|ontology_enrichment_celltype=CL:0000066!6.54e-25!254;CL:0002321!1.31e-22!248;CL:0000220!1.06e-21!246;CL:0000548!5.40e-11!679;CL:0000004!5.40e-11!679;CL:0000255!5.40e-11!679;CL:0000012!2.47e-10!682;CL:0000222!6.49e-10!119;CL:0000055!6.53e-09!180;CL:0000393!8.05e-09!60;CL:0000211!8.05e-09!60;CL:0000183!1.95e-08!59;CL:0000187!1.83e-07!54;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57;CL:0000223!9.20e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.40e-20,253;CL:0002321,2.32e-18,250;CL:0000223,1.04e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.21e-10!106;DOID:0050687!2.61e-10!143;DOID:162!7.33e-09!235;DOID:14566!2.62e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.03e-09,143;DOID:305,9.32e-09,106;DOID:162,5.33e-08,235;DOID:14566,1.14e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.87e-15!238;UBERON:0009142!1.87e-15!238;UBERON:0000481!2.14e-14!347;UBERON:0005256!2.20e-14!143;UBERON:0000490!2.51e-14!138;UBERON:0000119!2.83e-14!312;UBERON:0003914!6.37e-14!118;UBERON:0000483!2.68e-13!309;UBERON:0002100!1.28e-12!216;UBERON:0001048!2.22e-10!168;UBERON:0004119!2.98e-10!169;UBERON:0000925!2.98e-10!169;UBERON:0006595!2.98e-10!169;UBERON:0002049!8.24e-10!79;UBERON:0007798!8.24e-10!79;UBERON:0000486!9.08e-10!82;UBERON:0000914!1.70e-09!83;UBERON:0002329!1.70e-09!83;UBERON:0003077!1.70e-09!83;UBERON:0003059!1.70e-09!83;UBERON:0007282!1.70e-09!83;UBERON:0009618!1.70e-09!83;UBERON:0007285!1.70e-09!83;UBERON:0000466!4.26e-09!126;UBERON:0001007!6.14e-09!155;UBERON:0001555!6.14e-09!155;UBERON:0007026!6.14e-09!155;UBERON:0004290!8.83e-09!70;UBERON:0000475!1.46e-08!365;UBERON:0000055!2.26e-08!69;UBERON:0001981!3.34e-08!60;UBERON:0007500!3.34e-08!60;UBERON:0004537!3.34e-08!60;UBERON:0006965!3.34e-08!60;UBERON:0004872!5.53e-08!84;UBERON:0000077!8.93e-08!130;UBERON:0005177!1.50e-07!107;UBERON:0000464!2.26e-07!104;UBERON:0000477!2.71e-07!286;UBERON:0001637!3.55e-07!42;UBERON:0003509!3.55e-07!42;UBERON:0004572!3.55e-07!42;UBERON:0005911!5.02e-07!82;UBERON:0000922!6.04e-07!612;UBERON:0004111!6.49e-07!241;UBERON:0001134!8.60e-07!61;UBERON:0002036!8.60e-07!61;UBERON:0003082!8.60e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.64e-14,148;UBERON:0003914,1.66e-12,117;UBERON:0000119,9.30e-12,309;UBERON:0000483,8.56e-11,306;UBERON:0002100,1.06e-10,199;UBERON:0003104,3.20e-09,160;UBERON:0009142,3.20e-09,160;UBERON:0005256,1.17e-08,122;UBERON:0002049,3.68e-08,78;UBERON:0007798,3.68e-08,78;UBERON:0005177,5.46e-08,101;UBERON:0000486,1.10e-07,83;UBERON:0007500,1.14e-07,59;UBERON:0001981,1.14e-07,59;UBERON:0004537,1.14e-07,59;UBERON:0006965,1.14e-07,59;UBERON:0007503,3.94e-07,78;UBERON:0001048,6.18e-07,160 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,8.60068777755281,4.18680700783456,4.80571018686379,4.22027165165526,0.618831764800233,0.331397375727916,8.74022690387308,6.62963980826375,7.30310090387373,6.8310591830671,3.44738962615006,3.67201244239655,0,1.43117993565528,2.18999080116615,2.25976751270645,0.840547463227464,1.14940825229924,0.944529375764151,0,0,0,1.83884244895785,3.0120591877825,5.17655614233503,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,0,0.50133791063589,0,0,0,2.26883561193763,1.10864698731282,2.45937399940753,0.196468613246569,4.73583874780305,2.59549109949101,0,0,0,0,0,0,6.75792185046797,2.58070378531837,4.85996702250632,2.26123176769604,2.93649605346934,4.40188867104108,3.34391946458897,0.516833518338658,0.35576626268671,0.66944122552934,1.20848795132744,3.04108842287405,0.488124115096339,3.30896772311282,1.62028389576352,2.05389375053383,3.36794058939255,3.49095589498299,13.7984973719295,8.54339093611316,5.86245580577303,0,0,0,0,0.633152558322899,0.397227542439656,0.573673241497627,1.77334191099179,0.560677600142307,2.1349799145941,2.22000793575444,2.8008993185979,2.2900814251847,2.61539044981534,6.35701196108712,2.88087962239999,20.8546074332079,5.93104145977609,10.2684927878001,2.54062756938062,10.5691048779388,12.6260896607143,13.4832774434159,6.53293348015658,11.5464258273062,3.61640234115179,1.18800285728205,0.989067717114227,33.675970391707,10.0606539854273,7.74346124188705,12.1364964275805,4.15596173226274,0.438977620880838,0.612975591598039,2.55404700141215,2.26864366320042,0.358779271377724,0.640672166455702,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0,0,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.847802961552438,3.47869535693934,4.90943017063502,8.31733326628111,22.321188221716,9.012024245861,15.918570173124,14.5125477021519,19.4287055174234,3.28479623168247,1.56449532329816,0,6.90674606762403,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.772057809126758,0.871517776369625,1.18635309555548,0.134831308160164,0.196221465125346,0.38474715694639,2.95262181849859,2.80483547606892,0.4115740113314,0,0,0,0,0,3.32068784066407,4.11762744716461,3.62175941848464,6.74410519545717,3.71957197923034,3.61094936118265,12.054907296482,6.23960871167747,1.44331342025273,3.24605133930215,1.05667824812239,1.01056513432752,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,2.18376766658517,5.95455408418023,1.70161193135412,4.06887513919547,13.0350110916172,0,0,0.207328115540772,0,0,0.317489471460845,2.67391897890794,0,5.13217338068116,0.308482478109971,1.20137223137567,0.571652865261156,18.2773667482938,5.23152082599936,13.0542148761291,1.42198887333556,7.15312891703765,2.535908257668,1.32969058292435,1.04007436911366,3.34369586540785,9.92943924162948,7.19339883343468,0.142977993658148,0,0.823240336780769,3.25736184293735,0,6.33561498346743,2.1100756394171,0.871533458600294,0.799783929456456,0,0,0,1.19812427745791,0,1.42636905040718,1.59259437334337,0.205476322550383,0.716243852959582,0,0,0,0,6.35236560556159,1.30139853857622,0.773288812777695,1.00509759200609,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,5.15403545029498,0,0.178428988797162,0,0.117141414992713,0,0,2.0694614258501,1.99267679560631,1.10621501125022,3.47534457872331,3.91602314925481,3.43143423810856,0,0,0,2.72814814301633,4.99306318531491,4.83824469327489,0,0,0,0.128139149255701,0,0.160853921143607,0,3.85524234506639,3.01854933032316,3.28508624055237,4.15403543346897,1.85936605535935,11.1190693624292,1.60405176242628,0.736647911487171,2.18147451512753,3.27764102412091,0.524497659837696,7.21919380651859,2.0794141018192,15.6869953835371,5.84556898613043,3.79985864014353,1.13733384070897,3.40187410553031,0.647747748306418,1.54227252690289,2.98041081298238,2.00675909541941,3.82314409567557,5.81753206250107,5.37299411333228,0,0,3.07740150139667,1.96808787419823,1.62689197332152,0.412164046590889,0,0,6.3169209179579,3.25030123018261,0,7.63698674507764,5.39170159901255,3.99109554287937,6.06480918931935,0.966782203814463,0.435050081742686,4.17610474338894,0.890320356467374,0.826424576804891,2.11409074101617,1.02090169995667,1.0115778085555,2.32422774648643,0,5.5762981612848,3.38836938193698,2.12922412126809,0.869932992075073,3.7064843820784,0.858749320451947,0.372158369359667,0,0.571890581771475,2.303080121802,0.42793898803392,13.6827396608153,10.9892809627892,0.719489830333259,1.09814811894422,1.7671860351853,3.23491970517306,0,1.26377536871694,1.95053495635836,3.65570234446927,2.11300293513511,2.32049849393576,0.848432591722276,6.78048699721457,6.61638412255349,2.65375590096488,0.876901770507525,4.6302042741335,5.9030527684197,2.63783490051515,3.717881977197,5.07052084558035,3.15504974848913,1.17898849215745,2.1400263088875,1.41904425628239,0,0,19.7326050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| ||
|short_description=p2@ETV4 | |||
}} | }} |
Latest revision as of 18:25, 24 September 2015
Short description: | p2@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ETV4_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -11bp_to_uc002idy.1_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.40e-20 | 253 |
embryonic cell | 2.32e-18 | 250 |
endodermal cell | 1.04e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.64e-14 | 148 |
epithelial tube | 1.66e-12 | 117 |
cell layer | 9.30e-12 | 309 |
epithelium | 8.56e-11 | 306 |
trunk | 1.06e-10 | 199 |
mesenchyme | 3.20e-09 | 160 |
entire embryonic mesenchyme | 3.20e-09 | 160 |
trunk mesenchyme | 1.17e-08 | 122 |
vasculature | 3.68e-08 | 78 |
vascular system | 3.68e-08 | 78 |
trunk region element | 5.46e-08 | 101 |
multilaminar epithelium | 1.10e-07 | 83 |
epithelial tube open at both ends | 1.14e-07 | 59 |
blood vessel | 1.14e-07 | 59 |
blood vasculature | 1.14e-07 | 59 |
vascular cord | 1.14e-07 | 59 |
epithelial vesicle | 3.94e-07 | 78 |
primordium | 6.18e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.03e-09 | 143 |
carcinoma | 9.32e-09 | 106 |
cancer | 5.33e-08 | 235 |
disease of cellular proliferation | 1.14e-07 | 239 |