FFCP PHASE1:Hg19::chr17:39659035..39659056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000464634_5end | |||
|cluster_id=chr17:39659035..39659056,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_5_at_KRT13_5end | |||
|id=chr17:39659035..39659056,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.95e-20;1!UBERON:0008814;1.72e-10;2!UBERON:0010056;1.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.31e-16!2;UBERON:0001723!2.41e-11!3;UBERON:0001033!2.41e-11!3;UBERON:0010056!2.41e-11!3;UBERON:0003126!3.08e-10!7;UBERON:0001005!3.08e-10!7;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1;UBERON:0000997!1.13e-08!1;UBERON:0005056!1.13e-08!1;UBERON:0000065!6.04e-08!53;UBERON:0001042!1.70e-07!10;UBERON:0009145!1.70e-07!10;UBERON:0000072!3.10e-07!46;UBERON:0001004!5.14e-07!72;UBERON:0006562!7.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.18e-25;3!UBERON:0001033;3.18e-25;3!UBERON:0005795;2.47e-19;1!UBERON:0002372;3.57e-19;1!UBERON:0001961;3.57e-19;1!UBERON:0001744;3.57e-19;1!UBERON:0001042;3.57e-19;1!UBERON:0001735;3.57e-19;1!UBERON:0000002;4.81e-13;6!UBERON:0001560;4.81e-13;6!UBERON:0000341;1.57e-10;2!UBERON:0006562;2.85e-10;2!UBERON:0003127;3.42e-10;2!UBERON:0001043;1.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.38e-25,3;UBERON:0001033,3.38e-25,3;UBERON:0010056,3.38e-25,3;UBERON:0002372,3.25e-19,1;UBERON:0001961,3.25e-19,1;UBERON:0001744,3.25e-19,1;UBERON:0001735,3.25e-19,1;UBERON:0001042,6.19e-17,10;UBERON:0009145,6.19e-17,10;UBERON:0006562,1.85e-15,11;UBERON:0000002,4.81e-13,6;UBERON:0001560,4.81e-13,6;UBERON:0000341,1.57e-10,2;UBERON:0003127,3.27e-10,2;UBERON:0001557,3.24e-09,19;UBERON:0000166,4.89e-08,22;UBERON:0005795,5.01e-08,22;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3 | |||
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|short_description=p5@KRT13 | |||
}} | }} |
Latest revision as of 05:25, 20 September 2015
Short description: | p5@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -23bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.38e-25 | 3 |
gustatory system | 3.38e-25 | 3 |
future tongue | 3.38e-25 | 3 |
tonsil | 3.25e-19 | 1 |
mucosa-associated lymphoid tissue | 3.25e-19 | 1 |
lymphoid tissue | 3.25e-19 | 1 |
tonsillar ring | 3.25e-19 | 1 |
chordate pharynx | 6.19e-17 | 10 |
pharyngeal region of foregut | 6.19e-17 | 10 |
pharynx | 1.85e-15 | 11 |
uterine cervix | 4.81e-13 | 6 |
neck of organ | 4.81e-13 | 6 |
throat | 1.57e-10 | 2 |
open tracheal system trachea | 3.27e-10 | 2 |
upper respiratory tract | 3.24e-09 | 19 |
oral opening | 4.89e-08 | 22 |
embryonic uterus | 5.01e-08 | 22 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |