FFCP PHASE1:Hg19::chr17:19091325..19091326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33189 | |HGNC=33189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000365494_5end | |||
|cluster_id=chr17:19091325..19091326,+ | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_1_at_SNORD3A_5end | |||
|id=chr17:19091325..19091326,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.42e-47!42;CL:0000860!5.91e-43!45;CL:0000839!7.55e-31!70;CL:0000557!1.52e-30!71;CL:0000766!1.29e-27!76;CL:0002009!2.38e-27!65;CL:0002194!1.37e-26!63;CL:0000576!1.37e-26!63;CL:0000040!1.37e-26!63;CL:0000559!1.37e-26!63;CL:0002031!8.19e-23!124;CL:0000763!5.00e-20!112;CL:0000049!5.00e-20!112;CL:0000738!1.26e-19!140;CL:0002087!1.55e-17!119;CL:0000037!3.46e-17!172;CL:0000566!3.46e-17!172;CL:0002032!8.56e-17!165;CL:0000837!8.56e-17!165;CL:0000988!4.08e-16!182;CL:0000034!1.20e-08!444;CL:0000048!3.87e-08!430;CL:0000134!8.77e-08!358;CL:0000723!9.55e-08!436;CL:0002320!2.66e-07!365;CL:0000219!3.73e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-50;33!CL:0002057;8.68e-50;33!CL:0000473;1.13e-36;39!CL:0000234;1.13e-36;39!CL:0000576;5.90e-22;48!CL:0000766;4.95e-15;69!CL:0002087;1.53e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.06e-41,42;CL:0002057,7.06e-41,42;CL:0000473,2.16e-35,48;CL:0000234,2.16e-35,48;CL:0002009,1.85e-30,61;CL:0002194,1.05e-27,59;CL:0000576,1.05e-27,59;CL:0000040,1.05e-27,59;CL:0000559,1.05e-27,59;CL:0000557,1.74e-27,67;CL:0000766,3.08e-25,72;CL:0000839,1.72e-24,66;CL:0000763,5.10e-18,108;CL:0000049,5.10e-18,108;CL:0002031,5.19e-14,120;CL:0000738,1.26e-13,136;CL:0002087,7.60e-13,115;CL:0002032,5.48e-11,161;CL:0000837,5.48e-11,161;CL:0000037,2.18e-10,168;CL:0000988,1.09e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.57e-30;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.08e-29!80;UBERON:0001474!6.27e-26!86;UBERON:0004765!3.26e-21!101;UBERON:0001434!3.26e-21!101;UBERON:0002390!7.51e-21!102;UBERON:0003061!7.51e-21!102;UBERON:0002405!5.81e-18!115;UBERON:0002193!7.98e-18!112;UBERON:0002204!6.47e-13!167;UBERON:0002384!4.76e-07!375;UBERON:0003081!4.84e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.23e-08;4!UBERON:0010133;5.23e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.83e-24,76;UBERON:0001474,6.27e-22,82;UBERON:0004765,1.03e-19,90;UBERON:0002405,5.58e-19,93;UBERON:0002390,7.43e-18,98;UBERON:0003061,7.43e-18,98;UBERON:0001434,1.95e-17,100;UBERON:0002193,6.47e-16,108;UBERON:0002204,7.55e-12,167;UBERON:0003081,4.10e-09,203;UBERON:0003296,8.87e-08,4;UBERON:0010133,8.87e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,1.23350366406548,1.85823822537062,1.43846196161075,1.7931249457037,1.89185783910868,2.75796544589295,2.5819387343353,4.06279459783025,0.376484679085209,0.272906150057846,0.898893937780338,3.97909060082173,0.962787081228281,5.11469700639233,0.659702600373432,0.199463657621632,0.852449501065388,1.45104619314292,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,1.95469960234605,0.605399502633369,0.736555271975129,2.21523671208619,0,0.637812899895131,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.650296737799391,0.328875809207352,0.552700035571697,0,0,0.535081656179426,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.803765742325096,0.825236619583403,1.66176135211674,0,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0.829412415681711,0.265841714557995,0.521745061811734,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,1.23350366406548,1.85823822537062,1.43846196161075,1.7931249457037,1.89185783910868,2.75796544589295,2.5819387343353,4.06279459783025,0.376484679085209,0.272906150057846,0.898893937780338,3.97909060082173,0.962787081228281,5.11469700639233,0.659702600373432,0.199463657621632,0.852449501065388,1.45104619314292,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,1.95469960234605,0.605399502633369,0.736555271975129,2.21523671208619,0,0.637812899895131,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.650296737799391,0.328875809207352,0.552700035571697,0,0,0.535081656179426,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0.6312121671319,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.803765742325096,0.825236619583403,1.66176135211674,0,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0.829412415681711,0.265841714557995,0.521745061811734,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,1.21393120847326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@SNORD3A | |||
}} | }} |
Latest revision as of 23:31, 18 September 2015
Short description: | p1@SNORD3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD3A_5end |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | -2bp_to_ENST00000365494_5end |
EntrezGene: | NA |
HGNC: | 33189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.06e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.06e-41 | 42 |
defensive cell | 2.16e-35 | 48 |
phagocyte | 2.16e-35 | 48 |
macrophage dendritic cell progenitor | 1.85e-30 | 61 |
monopoietic cell | 1.05e-27 | 59 |
monocyte | 1.05e-27 | 59 |
monoblast | 1.05e-27 | 59 |
promonocyte | 1.05e-27 | 59 |
granulocyte monocyte progenitor cell | 1.74e-27 | 67 |
myeloid leukocyte | 3.08e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.72e-24 | 66 |
myeloid cell | 5.10e-18 | 108 |
common myeloid progenitor | 5.10e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 5.19e-14 | 120 |
leukocyte | 1.26e-13 | 136 |
nongranular leukocyte | 7.60e-13 | 115 |
hematopoietic oligopotent progenitor cell | 5.48e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-11 | 161 |
hematopoietic stem cell | 2.18e-10 | 168 |
hematopoietic cell | 1.09e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.83e-24 | 76 |
bone element | 6.27e-22 | 82 |
skeletal element | 1.03e-19 | 90 |
immune system | 5.58e-19 | 93 |
hematopoietic system | 7.43e-18 | 98 |
blood island | 7.43e-18 | 98 |
skeletal system | 1.95e-17 | 100 |
hemolymphoid system | 6.47e-16 | 108 |
musculoskeletal system | 7.55e-12 | 167 |
lateral plate mesoderm | 4.10e-09 | 203 |
gland of diencephalon | 8.87e-08 | 4 |
neuroendocrine gland | 8.87e-08 | 4 |