FFCP PHASE1:Hg19::chr16:87903102..87903120,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:87903102..87903120,- to FFCP PHASE1:Hg19::chr16:87903102..87903120,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8140 | |EntrezGene=8140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11063 | |HGNC=11063 | ||
|TSSclassifier=strong | |||
|UniProt=Q01650,Q8IV97 | |UniProt=Q01650,Q8IV97 | ||
|association_with_transcript=-2bp_to_NM_003486,uc002fkm.2_5end | |||
|cluster_id=chr16:87903102..87903120,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_1_at_SLC7A5_5end | |||
|id=chr16:87903102..87903120,- | |||
|ontology_enrichment_celltype=CL:0000066!2.02e-24!254;CL:0000063!5.40e-16!578;CL:0002076!1.25e-12!43;CL:0000012!1.29e-12!682;CL:0000548!2.08e-12!679;CL:0000004!2.08e-12!679;CL:0000255!2.08e-12!679;CL:0000223!9.70e-12!59;CL:0000003!3.28e-08!722;CL:0002368!6.85e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.84e-10;42!CL:0002368;6.91e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.01e-24,253;CL:0002076,1.51e-13,42;CL:0000223,1.87e-12,58;CL:0002368,6.85e-08,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.25e-20!235;DOID:0050687!5.43e-19!143;DOID:14566!1.80e-18!239;DOID:305!2.81e-17!106;DOID:1749!1.33e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.32e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.25e-20,235;DOID:0050687,5.43e-19,143;DOID:14566,1.80e-18,239;DOID:305,2.81e-17,106;DOID:1749,1.33e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@SLC7A5 | |||
}} | }} |
Latest revision as of 08:44, 18 September 2015
Short description: | p1@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC7A5_5end |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | -2bp_to_NM_003486, uc002fkm.2_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | Q01650Q8IV97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.01e-24 | 253 |
endo-epithelial cell | 1.51e-13 | 42 |
endodermal cell | 1.87e-12 | 58 |
respiratory epithelial cell | 6.85e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.25e-20 | 235 |
cell type cancer | 5.43e-19 | 143 |
disease of cellular proliferation | 1.80e-18 | 239 |
carcinoma | 2.81e-17 | 106 |
squamous cell carcinoma | 1.33e-07 | 14 |