FFCP PHASE1:Hg19::chr16:84002103..84002117,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:84002103..84002117,+ to FFCP PHASE1:Hg19::chr16:84002103..84002117,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54550 | |EntrezGene=54550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23746 | |HGNC=23746 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6G3 | |UniProt=Q7Z6G3 | ||
|association_with_transcript=-113bp_to_ENST00000305202_5end | |||
|cluster_id=chr16:84002103..84002117,+ | |||
|coexpression_cluster_id=C278 | |||
|description=CAGE_peak_2_at_NECAB2_5end | |||
|id=chr16:84002103..84002117,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.49e-10!10;CL:0000541!2.49e-10!10;CL:0002322!3.24e-10!5;CL:0000147!4.97e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.76e-11;10!CL:0002566;3.56e-08;1!CL:0000147;4.25e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.32e-11,10;CL:0000541,2.32e-11,10;CL:0002566,3.33e-08,1;CL:0000147,3.77e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.40e-11;82!UBERON:0006222;3.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-50!57;UBERON:0005068!1.24e-50!57;UBERON:0006241!1.24e-50!57;UBERON:0007135!1.24e-50!57;UBERON:0002780!9.33e-49!41;UBERON:0001890!9.33e-49!41;UBERON:0006240!9.33e-49!41;UBERON:0000955!1.17e-48!69;UBERON:0006238!1.17e-48!69;UBERON:0003080!2.21e-47!42;UBERON:0001017!7.28e-46!82;UBERON:0002616!9.81e-46!59;UBERON:0005743!2.69e-45!86;UBERON:0001893!3.92e-42!34;UBERON:0002020!5.59e-42!34;UBERON:0003528!5.59e-42!34;UBERON:0002791!4.35e-40!33;UBERON:0000073!9.13e-40!94;UBERON:0001016!9.13e-40!94;UBERON:0001869!1.88e-38!32;UBERON:0003075!3.10e-37!86;UBERON:0007284!3.10e-37!86;UBERON:0002346!5.08e-35!90;UBERON:0007023!3.30e-34!115;UBERON:0003056!7.82e-34!61;UBERON:0002619!3.99e-33!22;UBERON:0001950!5.21e-29!20;UBERON:0000956!1.30e-28!25;UBERON:0000203!1.30e-28!25;UBERON:0000033!1.98e-27!123;UBERON:0000153!1.52e-25!129;UBERON:0007811!1.52e-25!129;UBERON:0004121!1.80e-20!169;UBERON:0000924!1.10e-19!173;UBERON:0006601!1.10e-19!173;UBERON:0002420!1.93e-15!9;UBERON:0007245!1.93e-15!9;UBERON:0010009!1.93e-15!9;UBERON:0010011!1.93e-15!9;UBERON:0000454!1.93e-15!9;UBERON:0002308!6.80e-15!9;UBERON:0000125!6.80e-15!9;UBERON:0000200!3.65e-14!6;UBERON:0000349!1.30e-12!5;UBERON:0001872!7.10e-12!5;UBERON:0009663!4.36e-11!7;UBERON:0001871!1.46e-10!7;UBERON:0000025!2.10e-10!194;UBERON:0002298!1.04e-09!8;UBERON:0001894!5.93e-08!7;UBERON:0006222!5.93e-08!7;UBERON:0000064!1.06e-07!219;UBERON:0002771!1.17e-07!3;UBERON:0000988!1.86e-07!3;UBERON:0006331!2.36e-07!3;UBERON:0000483!2.69e-07!309;UBERON:0004111!2.73e-07!241;UBERON:0000119!4.16e-07!312;UBERON:0000477!9.94e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.65e-56;22!UBERON:0000956;1.09e-49;25!UBERON:0000203;1.09e-49;25!UBERON:0001950;1.22e-45;20!UBERON:0001869;3.24e-45;32!UBERON:0001893;3.21e-42;34!UBERON:0002791;2.48e-40;32!UBERON:0003528;1.00e-39;34!UBERON:0002020;1.00e-39;34!UBERON:0002780;2.23e-35;41!UBERON:0001890;2.23e-35;41!UBERON:0000349;6.70e-35;5!UBERON:0000073;4.57e-28;53!UBERON:0002616;4.57e-28;53!UBERON:0001872;4.56e-22;5!UBERON:0000200;1.96e-18;6!UBERON:0001871;1.35e-16;6!UBERON:0000955;2.36e-16;68!UBERON:0001876;1.23e-15;2!UBERON:0001954;1.19e-14;2!UBERON:0003022;1.19e-14;2!UBERON:0002421;1.19e-14;2!UBERON:0002600;1.19e-14;2!UBERON:0001017;9.36e-14;75!UBERON:0001016;5.81e-13;83!UBERON:0001870;2.52e-10;3!UBERON:0002022;9.77e-09;1!UBERON:0007023;2.54e-08;114!UBERON:0002581;3.56e-08;1!UBERON:0002902;3.56e-08;1!UBERON:0001882;3.56e-08;1!UBERON:0003112;3.56e-08;1!UBERON:0011158;3.56e-08;1!UBERON:0009899;3.56e-08;1!UBERON:0007190;3.56e-08;1!UBERON:0003128;3.56e-08;1!UBERON:0005403;3.56e-08;1!UBERON:0001703;3.56e-08;1!UBERON:0002241;3.56e-08;1!UBERON:0002420;1.09e-07;9!UBERON:0007245;1.09e-07;9!UBERON:0010009;1.09e-07;9!UBERON:0010011;1.09e-07;9!UBERON:0000454;1.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.03e-56,22;UBERON:0001869,1.59e-50,32;UBERON:0002780,1.27e-49,41;UBERON:0001890,1.27e-49,41;UBERON:0003080,1.27e-49,41;UBERON:0006240,1.27e-49,41;UBERON:0000956,1.86e-49,25;UBERON:0000203,1.86e-49,25;UBERON:0001893,1.83e-47,34;UBERON:0001950,2.33e-45,20;UBERON:0002791,2.89e-44,32;UBERON:0000073,2.41e-42,53;UBERON:0002616,2.41e-42,53;UBERON:0003528,1.42e-41,34;UBERON:0002020,1.42e-41,34;UBERON:0001049,6.32e-40,56;UBERON:0005068,6.32e-40,56;UBERON:0006241,6.32e-40,56;UBERON:0007135,6.32e-40,56;UBERON:0000955,1.76e-35,68;UBERON:0006238,1.76e-35,68;UBERON:0000349,4.15e-35,5;UBERON:0001017,1.16e-32,81;UBERON:0003056,1.66e-32,61;UBERON:0001016,4.45e-29,89;UBERON:0003075,2.80e-26,82;UBERON:0007284,2.80e-26,82;UBERON:0002346,6.68e-25,86;UBERON:0007023,8.42e-23,114;UBERON:0010371,2.39e-22,104;UBERON:0001872,1.30e-21,5;UBERON:0000200,7.89e-19,6;UBERON:0010314,6.63e-17,132;UBERON:0001871,1.33e-16,6;UBERON:0001876,1.24e-15,2;UBERON:0004121,5.09e-15,171;UBERON:0000924,5.09e-15,171;UBERON:0006601,5.09e-15,171;UBERON:0001954,1.04e-14,2;UBERON:0003022,1.04e-14,2;UBERON:0002421,1.04e-14,2;UBERON:0002600,1.04e-14,2;UBERON:0011216,1.41e-10,223;UBERON:0001870,1.87e-10,3;UBERON:0000025,3.38e-09,192;UBERON:0002022,9.79e-09,1;UBERON:0003112,1.75e-08,1;UBERON:0011158,1.75e-08,1;UBERON:0003128,1.75e-08,1;UBERON:0001703,1.75e-08,1;UBERON:0002241,1.75e-08,1;UBERON:0004761,1.75e-08,1;UBERON:0009617,1.75e-08,1;UBERON:0002581,2.02e-08,1;UBERON:0001882,2.50e-08,1;UBERON:0005403,2.50e-08,1;UBERON:0007190,2.89e-08,1;UBERON:0002902,4.72e-08,1;UBERON:0009899,4.72e-08,1;UBERON:0002420,9.73e-08,9;UBERON:0007245,9.73e-08,9;UBERON:0010009,9.73e-08,9;UBERON:0010011,9.73e-08,9;UBERON:0000454,9.73e-08,9 | |||
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|short_description=p2@NECAB2 | |||
}} | }} |
Latest revision as of 02:56, 18 September 2015
Short description: | p2@NECAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NECAB2_5end |
Coexpression cluster: | C278_amygdala_hippocampus_insula_medial_putamen_temporal_olfactory |
Association with transcript: | -113bp_to_ENST00000305202_5end |
EntrezGene: | NECAB2 |
HGNC: | 23746 |
UniProt: | Q7Z6G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.32e-11 | 10 |
melanoblast | 2.32e-11 | 10 |
dark melanocyte | 3.33e-08 | 1 |
pigment cell | 3.77e-08 | 14 |