FFCP PHASE1:Hg19::chr16:82045020..82045043,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:82045020..82045043,- to FFCP PHASE1:Hg19::chr16:82045020..82045043,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93517 | |EntrezGene=93517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29834 | |HGNC=29834 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000534209_5end | |||
|cluster_id=chr16:82045020..82045043,- | |||
|description=CAGE_peak_2_at_SDR42E1_5end | |||
|id=chr16:82045020..82045043,- | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-12!254;CL:0002076!1.83e-09!43;CL:0000223!3.34e-07!59;CL:0002159!4.26e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.53e-12;42!CL:0002251;9.48e-08;20!CL:0002368;1.39e-07;13!CL:0002159;2.43e-07;14!CL:0000240;5.33e-07;6!CL:0000311;5.33e-07;6!CL:0000079;5.33e-07;6!CL:0000237;5.33e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.36e-19,253;CL:0002076,2.50e-14,42;CL:0000223,1.00e-11,58;CL:0002159,1.21e-07,14;CL:0002251,1.34e-07,20;CL:0002368,1.38e-07,13;CL:0000240,2.69e-07,6;CL:0000311,2.69e-07,6;CL:0000079,2.69e-07,6;CL:0000237,2.69e-07,6;CL:0000036,2.69e-07,6;CL:0000357,2.69e-07,6;CL:0000114,2.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;3.38e-07;58!CL:0000357;5.33e-07;6!CL:0000114;5.33e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.81e-10!169;UBERON:0000925!9.81e-10!169;UBERON:0006595!9.81e-10!169;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0002530!8.02e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.47e-09;33!UBERON:0001044;6.13e-08;6!UBERON:0003293;6.13e-08;6!UBERON:0003294;6.13e-08;6!UBERON:0010047;6.13e-08;6!UBERON:0003408;6.13e-08;6!UBERON:0000167;6.13e-08;6!UBERON:0000161;1.54e-07;19!UBERON:0000166;1.54e-07;19!UBERON:0001041;3.80e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.15e-12,160;UBERON:0000925,9.15e-12,160;UBERON:0006595,9.15e-12,160;UBERON:0001007,7.29e-10,145;UBERON:0001555,7.29e-10,145;UBERON:0007026,7.29e-10,145;UBERON:0003408,4.75e-09,10;UBERON:0002530,8.98e-09,59;UBERON:0001044,4.47e-08,6;UBERON:0003293,4.47e-08,6;UBERON:0003294,4.47e-08,6;UBERON:0010047,4.47e-08,6;UBERON:0000167,4.47e-08,6;UBERON:0001004,1.34e-07,74;UBERON:0004921,1.88e-07,118;UBERON:0000166,3.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.79120467188971,3.49506195408276,1.58260186937072,1.73272894144065,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.382067028739756,0.328402357799783,0.157421562627358,0.393364276848904,1.15148819429164,0.464448369948228,2.75826367343678,2.409647350226,1.47901604066715,0,0.568676929949686,2.05520307534393,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0.764546456250458,2.64342657158052,1.68152568894461,0,0.393419540227666,1.57204305099666,2.46721798799411,0.334372990781356,0.651844533267181,0.946895611469467,1.94826728407911,0.222820913770347,0.589211814949674,2.43687284041983,0.812411591295047,0.512365278902701,0.520237390239513,0.164437904603676,0,0.869409257205157,2.22429844743091,1.87278579662799,1.04535523804977,0.113309342697566,1.91610246800961,1.03088233644789,2.53019692019503,0.95569624297229,0,0,1.05402583354441,1.66382594500744,1.24930726552346,0.947109008176067,0,1.81446068902259,0.267440195783507,0.868946423296794,0,0,0,0,0.50133791063589,1.15877215168659,1.5905718941022,0.486634870302636,0,0,0,0.851363990735132,0.728590576585084,2.59549109949101,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,1.77883131343355,3.3472061276467,1.20848795132744,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0.98667019366864,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0.80823028409406,0,0,0,5.41130388857231,3.27295344709002,2.00763216772303,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.8231480226628,0,2.53510069643662,2.94848165003288,1.18157981336281,0,2.21379189377604,0,4.06076056011915,7.86812272803337,1.80952150340936,1.75918045801206,0.325808305310325,0,0,0.115930404975077,0,1.29929802984966,0,0.570762456703795,7.90204397959275,4.29243081047436,0,0,0,4.68669169933885,7.22323151255096,3.68615252830205,3.49278238541108,4.35950907770943,4.98397482914775,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0.716243852959582,0,1.97030760201927,1.2937654491571,2.31017465303547,0,0,0,0,0,0.749007023947182,0,0,1.59498939234882,0.500170521059677,1.62759014219841,0.623912584592421,1.07057393278297,2.36553622550902,0,0,2.27407504055985,0,0.664225598535437,0.553107505625109,0,0,0,0.413536052245775,0.862856803274467,0.533637789017222,2.72814814301633,0,2.11673205330776,0.248107807818777,0.920771839728375,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,2.1754700926492,1.80455823272956,2.67034867914099,0,0,0,0.451199612907412,1.07821471946181,1.56869953835371,0,0.73886140225013,0,0.850468526382578,1.0795795805107,1.54227252690289,1.89662506280697,0.501689773854853,1.27438136522519,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0.574265537996172,1.95018073810956,0,0.290012154876366,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0.0890320356467374,4.13212288402445,3.45942121257191,4.72167036229961,2.73126008309985,0,0,0,0.616067160352178,0,0,0.37064843820784,0.572499546967965,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,2.11300293513511,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,1.47775344708365,0.329294892959902,0,0,1.34710957815717,0.670302275535787,5.44454924306613,0.470719003883896,0.86101074534246,0,0.886860307073351,1.60806380144872,1.52234282769651,0.764637207142375,1.70894156152249,0.952927101831156,0.822724546172388,1.29694662238543,0.540031437238115,0,0,0,2.45040215981032,1.85803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,4.6785135102055,0.586032717087576,0,0,0,2.62618933211459,3.26661148915902,4.30024982938925,0,0,2.67140892054974,0,0,1.39473591775749,1.38141957765574,5.79445320064835,0,0,0,1.43789361835723,0,0,0.591860433821602,0,0,0,0,0,2.60427761085233,2.53633999988968,0.724999575434793,1.137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,5.15867853830832,0.538651809526579,0,0.46112780877612,0,2.49888955420619,0.31900115973192,0,0,0,0,0,0,0,0,0,0.476809736941136,1.05499032264014,0.326465616318295,1.27217764290547,0,0,3.89213283814692,4.888241159469,0,0,0,0,0,0,0.547364367646998,5.47860933009851,0,1.18375320854817,10.8891644443797,0.30607276163049,0.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| 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| ||
|short_description=p2@SDR42E1 | |||
}} | }} |
Latest revision as of 01:57, 18 September 2015
Short description: | p2@SDR42E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SDR42E1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000534209_5end |
EntrezGene: | SDR42E1 |
HGNC: | 29834 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.36e-19 | 253 |
endo-epithelial cell | 2.50e-14 | 42 |
endodermal cell | 1.00e-11 | 58 |
general ecto-epithelial cell | 1.21e-07 | 14 |
epithelial cell of alimentary canal | 1.34e-07 | 20 |
respiratory epithelial cell | 1.38e-07 | 13 |
stratified squamous epithelial cell | 2.69e-07 | 6 |
keratin accumulating cell | 2.69e-07 | 6 |
stratified epithelial cell | 2.69e-07 | 6 |
keratinizing barrier epithelial cell | 2.69e-07 | 6 |
epithelial fate stem cell | 2.69e-07 | 6 |
stratified epithelial stem cell | 2.69e-07 | 6 |
surface ectodermal cell | 2.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.15e-12 | 160 |
endoderm | 9.15e-12 | 160 |
presumptive endoderm | 9.15e-12 | 160 |
digestive system | 7.29e-10 | 145 |
digestive tract | 7.29e-10 | 145 |
primitive gut | 7.29e-10 | 145 |
gland of gut | 4.75e-09 | 10 |
gland | 8.98e-09 | 59 |
saliva-secreting gland | 4.47e-08 | 6 |
gland of oral region | 4.47e-08 | 6 |
gland of foregut | 4.47e-08 | 6 |
oral gland | 4.47e-08 | 6 |
oral cavity | 4.47e-08 | 6 |
respiratory system | 1.34e-07 | 74 |
subdivision of digestive tract | 1.88e-07 | 118 |
oral opening | 3.74e-07 | 22 |