FFCP PHASE1:Hg19::chr16:56648572..56648582,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:56648572..56648582,- to FFCP PHASE1:Hg19::chr16:56648572..56648582,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:56648572..56648582,- | |||
|description=CAGE_peak_at_chr16:56648572..56648582,- | |||
|id=chr16:56648572..56648582,- | |||
|ontology_enrichment_celltype=CL:0000071!8.73e-19!18;CL:0002546!8.73e-19!18;CL:1000413!6.76e-14!9;CL:0002139!2.54e-13!24;CL:0000076!2.68e-11!62;CL:0000115!3.18e-08!35;CL:0000066!1.23e-07!254;CL:0002544!1.72e-07!6;CL:0002078!3.80e-07!44;CL:0000213!9.87e-07!57;CL:0000215!9.87e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.36e-13;18!CL:1000413;6.16e-12;9!CL:0002139;5.48e-10;24!CL:0000322;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.45e-13,18;CL:0002546,4.45e-13,18;CL:1000413,6.16e-12,9;CL:0002139,5.57e-10,24;CL:0000322,1.54e-09,3;CL:0000115,7.37e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;4.36e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.58e-26;1!DOID:3910;1.21e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,3.58e-26,1;DOID:3910,1.21e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000487!1.80e-20!22;UBERON:0001986!8.73e-19!18;UBERON:0004638!8.73e-19!18;UBERON:0004852!8.73e-19!18;UBERON:0006914!1.48e-17!25;UBERON:0003915!6.76e-14!9;UBERON:0004700!6.76e-14!9;UBERON:0001917!6.76e-14!9;UBERON:0001981!5.11e-07!60;UBERON:0007500!5.11e-07!60;UBERON:0004537!5.11e-07!60;UBERON:0006965!5.11e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.04e-18;22!UBERON:0006914;2.85e-16;25!UBERON:0004903;1.21e-13;2!UBERON:0002173;1.21e-13;2!UBERON:0002186;1.21e-13;2!UBERON:0000490;4.32e-13;33!UBERON:0004638;4.36e-13;18!UBERON:0001986;4.36e-13;18!UBERON:0004852;4.36e-13;18!UBERON:0003915;6.16e-12;9!UBERON:0004700;6.16e-12;9!UBERON:0001917;6.16e-12;9!UBERON:0004821;1.53e-09;3!UBERON:0007499;1.53e-09;3!UBERON:0003215;1.53e-09;3!UBERON:0010368;1.53e-09;3!UBERON:0009911;1.53e-09;3!UBERON:0002299;1.53e-09;3!UBERON:0006524;1.53e-09;3!UBERON:0008874;1.53e-09;3!UBERON:0002169;1.53e-09;3!UBERON:0004894;1.53e-09;3!UBERON:0009856;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,2.09e-18,22;UBERON:0006914,2.91e-16,25;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0004638,4.45e-13,18;UBERON:0001986,4.45e-13,18;UBERON:0004852,4.45e-13,18;UBERON:0003915,6.16e-12,9;UBERON:0004700,6.16e-12,9;UBERON:0001917,6.16e-12,9;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,1.25849830862972,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,3.06633274931766,0,0.916008719652036,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80672114403045,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,3.67318726575589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0.957651272384428,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,0.480952921509202,0,0,0,0,0,0.14405479798815,0.745515213392595,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,2.0710797781803,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,1.25849830862972,0.275118041940067,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,3.06633274931766,0,0.916008719652036,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80672114403045,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,3.67318726575589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0.957651272384428,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0.596143835108969,0,0,0.480952921509202,0,0,0,0,0,0.14405479798815,0.745515213392595,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,2.0710797781803,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:56648572..56648582,- | |||
}} | }} |
Latest revision as of 10:19, 25 July 2015
Short description: | p@chr16:56648572..56648582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56648572..56648582, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.45e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.45e-13 | 18 |
endothelial cell of artery | 6.16e-12 | 9 |
endothelial cell of vascular tree | 5.57e-10 | 24 |
pneumocyte | 1.54e-09 | 3 |
endothelial cell | 7.37e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 2.09e-18 | 22 |
squamous epithelium | 2.91e-16 | 25 |
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
blood vessel endothelium | 4.45e-13 | 18 |
endothelium | 4.45e-13 | 18 |
cardiovascular system endothelium | 4.45e-13 | 18 |
endothelial tube | 6.16e-12 | 9 |
arterial system endothelium | 6.16e-12 | 9 |
endothelium of artery | 6.16e-12 | 9 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 3.58e-26 | 1 |
lung adenocarcinoma | 1.21e-13 | 2 |