FFCP PHASE1:Hg19::chr16:55525781..55525812,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:55525781..55525812,+ to FFCP PHASE1:Hg19::chr16:55525781..55525812,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55525781..55525812,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55525781..55525812,+ | |||
|id=chr16:55525781..55525812,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.58e-38!180;CL:0000680!8.46e-19!57;CL:0000056!8.46e-19!57;CL:0000355!8.46e-19!57;CL:0000057!5.84e-18!75;CL:0000183!8.28e-18!59;CL:0000187!2.85e-17!54;CL:0000192!5.00e-17!42;CL:0000514!5.00e-17!42;CL:0000393!4.97e-16!60;CL:0000211!4.97e-16!60;CL:0000359!5.01e-13!32;CL:0000048!5.56e-11!430;CL:0000723!2.69e-10!436;CL:0002371!3.96e-10!591;CL:0000034!2.32e-09!444;CL:0000222!1.08e-08!119;CL:0000144!7.03e-08!625;CL:0002620!7.98e-08!23;CL:0002539!1.02e-07!10;CL:0002334!1.96e-07!12;CL:0000499!6.35e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.02e-11;12!CL:0002539;1.76e-11;10!CL:0000359;2.28e-11;32!CL:0000192;4.67e-11;43!CL:0000499;2.00e-09;28!CL:0000134;1.52e-08;55!CL:0002320;3.59e-08;188!CL:0000048;1.53e-07;58!CL:0002620;3.83e-07;23!CL:0000723;3.97e-07;61!CL:0000057;8.25e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.35e-19,427;CL:0000723,8.57e-19,433;CL:0000057,2.26e-18,76;CL:0000034,9.20e-18,441;CL:0000192,2.34e-14,43;CL:0000514,2.34e-14,43;CL:0000680,7.48e-13,58;CL:0000056,7.48e-13,58;CL:0000355,7.48e-13,58;CL:0000359,1.18e-11,32;CL:0002539,2.32e-11,10;CL:0002334,2.47e-11,12;CL:0000187,5.16e-11,55;CL:0000393,7.72e-10,61;CL:0000211,7.72e-10,61;CL:0002320,9.22e-10,361;CL:0000134,1.23e-09,354;CL:0000499,1.57e-09,28;CL:0000136,1.30e-08,15;CL:0000219,2.66e-07,386;CL:0002620,3.49e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.67e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!6.81e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.85e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.28e-22!70;UBERON:0000914!6.98e-22!83;UBERON:0002329!6.98e-22!83;UBERON:0003077!6.98e-22!83;UBERON:0003059!6.98e-22!83;UBERON:0007282!6.98e-22!83;UBERON:0009618!6.98e-22!83;UBERON:0007285!6.98e-22!83;UBERON:0000486!8.17e-21!82;UBERON:0002385!1.86e-20!63;UBERON:0001015!1.86e-20!63;UBERON:0000383!1.86e-20!63;UBERON:0001134!2.57e-20!61;UBERON:0002036!2.57e-20!61;UBERON:0003082!2.57e-20!61;UBERON:0001637!2.92e-16!42;UBERON:0003509!2.92e-16!42;UBERON:0004572!2.92e-16!42;UBERON:0005256!8.24e-15!143;UBERON:0004573!1.27e-14!33;UBERON:0004571!1.27e-14!33;UBERON:0004872!3.05e-13!84;UBERON:0001981!7.78e-13!60;UBERON:0007500!7.78e-13!60;UBERON:0004537!7.78e-13!60;UBERON:0006965!7.78e-13!60;UBERON:0002049!2.17e-11!79;UBERON:0007798!2.17e-11!79;UBERON:0002100!6.03e-11!216;UBERON:0000490!9.12e-11!138;UBERON:0000947!2.08e-10!21;UBERON:0010191!2.08e-10!21;UBERON:0000055!2.77e-10!69;UBERON:0003914!4.30e-10!118;UBERON:0002199!1.97e-09!45;UBERON:0002416!1.97e-09!45;UBERON:0004535!2.23e-09!110;UBERON:0003102!2.93e-09!95;UBERON:0001009!6.32e-09!113;UBERON:0001135!8.52e-09!15;UBERON:0000475!1.27e-08!365;UBERON:0004237!1.02e-07!10;UBERON:0004695!1.02e-07!10;UBERON:0002111!1.02e-07!10;UBERON:0004178!1.02e-07!10;UBERON:0002097!3.83e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.80e-15;33!UBERON:0004571;1.80e-15;33!UBERON:0000947;9.60e-13;21!UBERON:0010191;9.60e-13;21!UBERON:0001637;6.95e-12;42!UBERON:0003509;6.95e-12;42!UBERON:0004572;6.95e-12;42!UBERON:0004237;1.76e-11;10!UBERON:0004695;1.76e-11;10!UBERON:0002111;1.76e-11;10!UBERON:0004178;1.76e-11;10!UBERON:0004457;1.54e-09;9!UBERON:0000042;1.54e-09;9!UBERON:0001135;1.76e-09;15!UBERON:0002385;1.11e-08;31!UBERON:0001015;1.11e-08;31!UBERON:0000383;1.11e-08;31!UBERON:0002384;1.46e-08;198!UBERON:0003688;1.92e-08;6!UBERON:0002358;1.92e-08;6!UBERON:0003684;1.92e-08;6!UBERON:0001178;1.92e-08;6!UBERON:0001013;3.39e-08;14!UBERON:0007500;3.41e-07;56!UBERON:0001981;3.41e-07;56!UBERON:0004537;3.41e-07;56!UBERON:0002199;7.99e-07;46!UBERON:0002416;7.99e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.23e-16,33;UBERON:0004571,1.23e-16,33;UBERON:0001637,5.30e-16,42;UBERON:0003509,5.30e-16,42;UBERON:0004572,5.30e-16,42;UBERON:0007524,1.76e-14,73;UBERON:0002329,4.73e-14,71;UBERON:0003059,4.73e-14,71;UBERON:0007282,4.73e-14,71;UBERON:0004290,4.73e-14,71;UBERON:0009618,4.73e-14,71;UBERON:0003077,1.07e-13,72;UBERON:0007285,1.07e-13,72;UBERON:0007503,1.94e-13,78;UBERON:0001134,2.13e-13,62;UBERON:0002036,2.13e-13,62;UBERON:0003082,2.13e-13,62;UBERON:0000486,3.91e-13,83;UBERON:0002385,1.18e-12,64;UBERON:0001015,1.18e-12,64;UBERON:0000383,1.18e-12,64;UBERON:0000947,1.74e-12,21;UBERON:0010191,1.74e-12,21;UBERON:0004872,1.48e-11,83;UBERON:0004237,2.32e-11,10;UBERON:0004695,2.32e-11,10;UBERON:0002111,2.32e-11,10;UBERON:0004178,2.32e-11,10;UBERON:0007500,2.95e-11,59;UBERON:0001981,2.95e-11,59;UBERON:0004537,2.95e-11,59;UBERON:0006965,2.95e-11,59;UBERON:0002199,1.57e-10,46;UBERON:0002416,1.57e-10,46;UBERON:0002384,4.52e-10,371;UBERON:0005256,1.15e-09,122;UBERON:0001135,1.35e-09,15;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0000055,2.60e-09,68;UBERON:0003914,6.50e-09,117;UBERON:0001013,1.24e-08,14;UBERON:0003688,2.45e-08,6;UBERON:0002358,2.45e-08,6;UBERON:0003684,2.45e-08,6;UBERON:0001178,2.45e-08,6;UBERON:0002049,1.40e-07,78;UBERON:0007798,1.40e-07,78;UBERON:0003102,1.42e-07,99;UBERON:0002097,2.32e-07,41;UBERON:0002100,2.70e-07,199;UBERON:0004535,2.84e-07,109;UBERON:0000490,3.93e-07,148;UBERON:0001009,8.26e-07,112 | |||
|phase1_expression=7.08545679155171,7.92171938396638,3.66481450649525,4.00293193412522,11.6209884551095,1.74467704820074,2.53299878168311,1.89515962028049,2.61185628199839,0,0,0,0,0.37129905888014,0.331397375727916,8.0679017574213,4.21886169616784,7.30310090387373,9.27072317701963,0.61560529038394,1.02000345622126,0.940364164434263,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,2.00535164254356,1.59331170856906,1.5905718941022,4.86634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,1.19257444420023,0,0.694281003215189,0.56530794192401,0,1.6507082516404,0.835979866147242,0,0,0,1.20848795132744,0,0.488124115096339,0.367663080345869,1.62028389576352,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,1.98788780678127,2.65924074495618,2.25095607382472,7.74458876021797,1.06400514659507,0,1.06748995729705,1.48000529050296,0.311211035399766,0.538842688278752,1.14423332179421,0.605429710579726,1.15235184896,0.468642863667593,0.624320153660641,0.570471821544449,1.64393548606981,0.117434498643765,0,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,4.75201142912821,11.1270118175351,0,1.43723628363248,0.336672227908132,0,0,1.31693286264251,2.75839016219118,3.45547535485173,0.226864366320042,2.15267562826634,2.13557388818567,1.69545520927649,2.10063767259082,1.23663035086127,0.515281080091258,1.48893485065272,4.72573730275545,1.94874010322397,1.00973509697646,1.74894807420369,2.58633690910099,3.19508633264953,1.10827308050404,0.847802961552438,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,1.56449532329816,10.2918550110862,1.38134921352481,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0.492434012174795,0,0.297262324577456,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.07333828582095,3.23179289394444,7.15312891703765,0.845302752556,4.78688609852767,5.2003718455683,0.257207374262142,0,0.266422179016099,0.714889968290738,1.62786481617433,0,0,0.710783897485092,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,1.42636905040718,1.30303176000821,3.49309748335652,1.96967059563885,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,1.24782516918484,5.88815663030634,3.31175071571263,0.937131319941706,1.20378439891088,38.6592756895174,6.2083842775503,0.664225598535437,0.553107505625109,1.56390506042549,1.17480694477644,2.05886054286514,0,0,0,0,0,0,9.42809669711352,4.29693525206575,12.0683840606222,5.63812256725084,2.04682899626681,7.23842645146234,0,3.23840356985577,2.48586415438378,1.14978018419333,7.2695620085707,1.04589340613963,0,2.6065841139427,0,1.60740227430449,2.36718518408732,4.06485686374215,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,3.08454505380579,0,1.00337954770971,0,0,0,0,0,0,0,0.650756789328606,0.309123034943167,0.27470839445503,0.165018999841176,0.574265537996172,1.30012049207304,0,1.06337790121334,0.462145851343933,0.460511024178389,0.275673144969061,0.537101224341368,0.725083469571143,0.0852266274161009,0.356128142586949,0.165284915360978,0,0,0,2.78907329578371,8.49993336442728,1.3940745403212,1.23213432070436,1.06461206063404,2.60979897622522,4.633105477598,0.429374660225974,0.744316738719335,0.316379424718726,0.762520775695299,1.535386747868,2.56763392820352,0.636406495851874,3.13979456079692,1.61885211824983,1.92175920815238,0.942499218765491,0.202182481573316,0,4.21258456238981,0.975267478179181,1.70599442741899,2.11300293513511,1.22849920267187,5.09059555033366,2.26016233240486,2.75682671773062,3.98063385144732,4.38450885253763,0.578775534266688,0.655894752046633,0.405820753925408,1.54911749049875,0.845086807596724,0,0.294747123039363,1.07001315444375,1.77380532035299,8.02209014131124,7.90307743103764,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0.659006605437454,0.86101074534246,0,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,1.11308705022906,0,0,1.19548792950642,0.276283915531148,0,0.818149460017238,0,2.48831670129446,0,0,0,0.789147245095469,0,0,0,0,0,0,0,1.44999915086959,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,3.19037756371603,0,0.718061155278177,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,1.24807205711825,0,0,0,2.09672001890436,0,0,0,0,0.484945082442097,0,0.451961481561065,0.411125773940253,0.19871461170299,0,0,0.320635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| ||
|short_description=p@chr16:55525781..55525812,+ | |||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55525781..55525812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55525781..55525812, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.35e-19 | 427 |
somatic stem cell | 8.57e-19 | 433 |
fibroblast | 2.26e-18 | 76 |
stem cell | 9.20e-18 | 441 |
smooth muscle cell | 2.34e-14 | 43 |
smooth muscle myoblast | 2.34e-14 | 43 |
muscle precursor cell | 7.48e-13 | 58 |
myoblast | 7.48e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.48e-13 | 58 |
vascular associated smooth muscle cell | 1.18e-11 | 32 |
aortic smooth muscle cell | 2.32e-11 | 10 |
preadipocyte | 2.47e-11 | 12 |
muscle cell | 5.16e-11 | 55 |
electrically responsive cell | 7.72e-10 | 61 |
electrically active cell | 7.72e-10 | 61 |
connective tissue cell | 9.22e-10 | 361 |
mesenchymal cell | 1.23e-09 | 354 |
stromal cell | 1.57e-09 | 28 |
fat cell | 1.30e-08 | 15 |
motile cell | 2.66e-07 | 386 |
skin fibroblast | 3.49e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.85e-08 | 14 |