FFCP PHASE1:Hg19::chr16:54320297..54320311,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:54320297..54320311,+ to FFCP PHASE1:Hg19::chr16:54320297..54320311,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:54320297..54320311,+ | |||
|description=CAGE_peak_at_chr16:54320297..54320311,+ | |||
|id=chr16:54320297..54320311,+ | |||
|ontology_enrichment_celltype=CL:0002540!4.86e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.60e-12;1!CL:0000164;2.60e-12;1!CL:0000502;2.60e-12;1!CL:0000172;2.60e-12;1!CL:0000173;2.60e-12;1!CL:0002540;3.02e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-12,1;CL:0000164,3.08e-12,1;CL:0000502,3.08e-12,1;CL:0000172,3.08e-12,1;CL:0000173,3.08e-12,1;CL:0002351,3.08e-12,1;CL:0002540,2.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.02e-13;1!UBERON:0005754;9.91e-13;1!CL:0002351;2.60e-12;1!UBERON:0007297;5.41e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!1.67e-09!143;DOID:305!1.85e-07!106;DOID:162!5.94e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.60e-12;1!DOID:4231;8.76e-07;2!DOID:114;8.76e-07;2!DOID:1907;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.08e-12,1;DOID:114,7.20e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.53e-16;3!UBERON:0004054;7.53e-16;3!UBERON:0000998;9.91e-13;1!UBERON:0006868;9.91e-13;1!UBERON:0001000;2.60e-12;1!UBERON:0007195;2.60e-12;1!UBERON:0005352;2.60e-12;1!UBERON:0005904;3.97e-12;4!UBERON:0001474;4.46e-10;18!UBERON:0002371;8.42e-09;12!UBERON:0004765;4.96e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.38e-16,3;UBERON:0004054,5.38e-16,3;UBERON:0000998,1.11e-12,1;UBERON:0006868,1.11e-12,1;UBERON:0001000,1.40e-12,1;UBERON:0005352,1.40e-12,1;UBERON:0005904,3.09e-12,4;UBERON:0007195,4.81e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.702254033511242,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0.558350568994769,0.675105328965065,0.194874010322397,0,0.184099797284599,0.646584227275248,0,0.10075209822764,0,0,0,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0.537182889719687,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0,0.413509717453592,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0.921722292925374,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0.597743964753209,0,0.251932747854276,0.409074730008619,0,0,0,0.179021174675609,0.511572370226872,0,0,1.11136990144637,0,0,0,0.7812832832557,3.14855999986305,0.724999575434793,0,0.762760950878299,0,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0.331737779793674,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0.586993856796269,0.242780379534093,1.97292201424695,0,0,0.505492637027904,0.60129367765797,0.72581733978073,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0.52418000472609,0,0.483781656445426,0.0730893170861856,0,0.193978032976839,0,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0.288180834308212,0.114536596165916,0.343189995723929,0,0.372757606696298,0.942776138467182,0,0,0.509991088181609,0.866851769704557,0,0,0,0,0,0,0,0,0.599037001496973,1.71690419254628,0.223171457441873,0.268733889946905,0,1.16495949527454,0.315132729228895,0.329663433524666,0.13480708770837,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0,0,0.104909176269996,0,0.537862017998534,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0,0.511164065356265,0.679872549120754,0,0,0.387848869084652,0.39669780522807,0,1.40963004463334,0,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0.499921631848426,0,0,0,0,0,0.447764408660622,2.10341978862502,0.554805861502613,0.568209015825267,1.76097531226803,0.889811221596536,0.228840068396924,0.151230923763239,0,0.295710299979268,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,2.40016658797892,0,0,0,0.192619830407303,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,1.13503190713367,0,0,0,0,0,0.471797825567689,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.550285795565037,0.462102664601353,0,0.690359926060101,2.18807844327902,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0,0.236387681767936,0,0.470958557103084,0,0,0,0.647782773655864,0,0.357382720883282,0.158013611732727,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,0.430227358820278,0,0,2.11693525095465,0.68732060563215,0,0,0.223710863595585,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0,1.17838273550813,0.392616934229891,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0.631086248772738,0,0,0,0,0.462175628631418,0,0.504665699340316,0,1.26698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0.359300808426348,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0.702254033511242,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0.558350568994769,0.675105328965065,0.194874010322397,0,0.184099797284599,0.646584227275248,0,0.10075209822764,0,0,0,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0.537182889719687,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0,0.413509717453592,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0.921722292925374,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0.597743964753209,0,0.251932747854276,0.409074730008619,0,0,0,0.179021174675609,0.511572370226872,0,0,1.11136990144637,0,0,0,0.7812832832557,3.14855999986305,0.724999575434793,0,0.762760950878299,0,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0.331737779793674,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0.586993856796269,0.242780379534093,1.97292201424695,0,0,0.505492637027904,0.60129367765797,0.72581733978073,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0.52418000472609,0,0.483781656445426,0.0730893170861856,0,0.193978032976839,0,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0.288180834308212,0.114536596165916,0.343189995723929,0,0.372757606696298,0.942776138467182,0,0,0.509991088181609,0.866851769704557,0,0,0,0,0,0,0,0,0.599037001496973,1.71690419254628,0.223171457441873,0.268733889946905,0,1.16495949527454,0.315132729228895,0.329663433524666,0.13480708770837,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0,0,0.104909176269996,0,0.537862017998534,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0,0.511164065356265,0.679872549120754,0,0,0.387848869084652,0.39669780522807,0,1.40963004463334,0,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0.499921631848426,0,0,0,0,0,0.447764408660622,2.10341978862502,0.554805861502613,0.568209015825267,1.76097531226803,0.889811221596536,0.228840068396924,0.151230923763239,0,0.295710299979268,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,2.40016658797892,0,0,0,0.192619830407303,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,1.13503190713367,0,0,0,0,0,0.471797825567689,0.109209638192014,0.169732529954025,0,0.247871528518004,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0.550285795565037,0.462102664601353,0,0.690359926060101,2.18807844327902,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.175871244359621,0,0,0.336283722218824,0,0.455324382702595,0,0,0,0,0,0.236387681767936,0,0.470958557103084,0,0,0,0.647782773655864,0,0.357382720883282,0.158013611732727,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,0.430227358820278,0,0,2.11693525095465,0.68732060563215,0,0,0.223710863595585,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0,1.17838273550813,0.392616934229891,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0.631086248772738,0,0,0,0,0.462175628631418,0,0.504665699340316,0,1.26698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0.359300808426348,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr16:54320297..54320311,+ | |||
}} | }} |
Latest revision as of 09:48, 25 July 2015
Short description: | p@chr16:54320297..54320311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:54320297..54320311, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.08e-12 | 1 |
enteroendocrine cell | 3.08e-12 | 1 |
type D enteroendocrine cell | 3.08e-12 | 1 |
somatostatin secreting cell | 3.08e-12 | 1 |
pancreatic D cell | 3.08e-12 | 1 |
progenitor cell of endocrine pancreas | 3.08e-12 | 1 |
mesenchymal stem cell of the bone marrow | 2.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.38e-16 | 3 |
internal male genitalia | 5.38e-16 | 3 |
seminal vesicle | 1.11e-12 | 1 |
seminal fluid secreting gland | 1.11e-12 | 1 |
vas deferens | 1.40e-12 | 1 |
spermatic cord | 1.40e-12 | 1 |
duct of male reproductive system | 3.09e-12 | 4 |
stroma of bone marrow | 4.81e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.08e-12 | 1 |
heart disease | 7.20e-07 | 2 |