FFCP PHASE1:Hg19::chr16:53088885..53088961,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:53088885..53088961,+ to FFCP PHASE1:Hg19::chr16:53088885..53088961,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80205 | |EntrezGene=80205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |HGNC=25701 | ||
|TSSclassifier=strong | |||
|UniProt=Q3L8U1,Q461N2 | |UniProt=Q3L8U1,Q461N2 | ||
|association_with_transcript=0bp_to_ENST00000398510,ENST00000447540,NM_025134,uc002egy.2_5end | |||
|cluster_id=chr16:53088885..53088961,+ | |||
|description=CAGE_peak_1_at_CHD9_5end | |||
|id=chr16:53088885..53088961,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.86e-08!24;CL:0000826!3.86e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.55e-08;24!CL:0000236;8.16e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.86e-08,24;CL:0000826,3.86e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.58e-08!235;DOID:14566!7.84e-08!239;DOID:2531!5.33e-07!51;DOID:0060083!5.33e-07!51;DOID:8692!8.05e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.58e-08,235;DOID:14566,7.88e-08,239;DOID:2531,5.33e-07,51;DOID:0060083,5.33e-07,51;DOID:8692,8.05e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.92e-13!115;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.64e-12,114;UBERON:0001049,3.33e-07,56;UBERON:0005068,3.33e-07,56;UBERON:0006241,3.33e-07,56;UBERON:0007135,3.33e-07,56 | |||
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| ||
|short_description=p1@CHD9 | |||
}} | }} |
Latest revision as of 22:19, 16 September 2015
Short description: | p1@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398510, ENST00000447540, NM_025134, uc002egy.2_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q3L8U1Q461N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.86e-08 | 24 |
pro-B cell | 3.86e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.64e-12 | 114 |
neural tube | 3.33e-07 | 56 |
neural rod | 3.33e-07 | 56 |
future spinal cord | 3.33e-07 | 56 |
neural keel | 3.33e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.58e-08 | 235 |
disease of cellular proliferation | 7.88e-08 | 239 |
hematologic cancer | 5.33e-07 | 51 |
immune system cancer | 5.33e-07 | 51 |
myeloid leukemia | 8.05e-07 | 31 |