FFCP PHASE1:Hg19::chr16:4897663..4897688,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:4897663..4897688,+ to FFCP PHASE1:Hg19::chr16:4897663..4897688,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29855 | |EntrezGene=29855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12506 | |HGNC=12506 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG3 | |UniProt=Q9NPG3 | ||
|association_with_transcript=-223bp_to_ENST00000262376,ENST00000545171,NM_001079514,uc002cyb.2_5end | |||
|cluster_id=chr16:4897663..4897688,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_UBN1_5end | |||
|id=chr16:4897663..4897688,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.55e-17!76;CL:0000763!4.35e-15!112;CL:0000049!4.35e-15!112;CL:0000839!3.17e-13!70;CL:0000557!5.33e-13!71;CL:0002194!1.05e-12!63;CL:0000576!1.05e-12!63;CL:0000040!1.05e-12!63;CL:0000559!1.05e-12!63;CL:0002009!2.84e-12!65;CL:0000860!4.91e-12!45;CL:0002057!1.43e-11!42;CL:0000738!2.22e-11!140;CL:0000037!4.52e-11!172;CL:0000566!4.52e-11!172;CL:0002032!9.21e-11!165;CL:0000837!9.21e-11!165;CL:0000988!1.90e-10!182;CL:0000115!8.14e-08!35;CL:0002031!8.62e-08!124;CL:0002087!1.02e-07!119;CL:0002139!1.86e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-13;33!CL:0002057;2.97e-13;33!CL:0000473;4.44e-11;39!CL:0000234;4.44e-11;39!CL:0002139;8.46e-10;24!CL:0000576;4.36e-09;48!CL:0000115;5.81e-09;36!CL:0000766;1.10e-08;69!CL:0000094;1.61e-08;8!CL:0000071;5.53e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.32e-19,72;CL:0000860,1.43e-14,42;CL:0002057,1.43e-14,42;CL:0000473,2.94e-14,48;CL:0000234,2.94e-14,48;CL:0000557,4.29e-14,67;CL:0000763,4.30e-14,108;CL:0000049,4.30e-14,108;CL:0000839,2.55e-13,66;CL:0002009,5.44e-13,61;CL:0002194,5.51e-13,59;CL:0000576,5.51e-13,59;CL:0000040,5.51e-13,59;CL:0000559,5.51e-13,59;CL:0000738,1.48e-12,136;CL:0000115,2.40e-11,36;CL:0002139,8.77e-11,24;CL:0000037,1.05e-10,168;CL:0002032,8.03e-10,161;CL:0000837,8.03e-10,161;CL:0000988,1.43e-09,177;CL:0000094,1.21e-08,8;CL:0000071,1.88e-08,18;CL:0002546,1.88e-08,18;CL:0002031,4.23e-08,120;CL:0002087,8.14e-08,115;CL:0002078,2.03e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;5.04e-11;42!CL:0002546;5.53e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.73e-16!112;UBERON:0002390!9.81e-15!102;UBERON:0003061!9.81e-15!102;UBERON:0002405!8.96e-14!115;UBERON:0002371!1.58e-11!80;UBERON:0001474!1.65e-10!86;UBERON:0003081!3.97e-10!216;UBERON:0004765!7.75e-09!101;UBERON:0001434!7.75e-09!101;UBERON:0001009!9.42e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.53e-08;18!UBERON:0001986;5.53e-08;18!UBERON:0004852;5.53e-08;18!UBERON:0000178;1.54e-07;15!UBERON:0000179;1.54e-07;15!UBERON:0000463;1.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.93e-18,108;UBERON:0002390,7.38e-17,98;UBERON:0003061,7.38e-17,98;UBERON:0003081,2.99e-14,203;UBERON:0002405,6.03e-13,93;UBERON:0002371,3.91e-12,76;UBERON:0001474,3.04e-10,82;UBERON:0004765,7.76e-09,90;UBERON:0001009,1.69e-08,112;UBERON:0004638,1.88e-08,18;UBERON:0001986,1.88e-08,18;UBERON:0004852,1.88e-08,18;UBERON:0000178,1.32e-07,15;UBERON:0000179,1.32e-07,15;UBERON:0000463,1.32e-07,15;UBERON:0004535,2.31e-07,109;UBERON:0001434,2.82e-07,100;UBERON:0000487,4.01e-07,22 | |||
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| ||
|short_description=p2@UBN1 | |||
}} | }} |
Latest revision as of 19:32, 16 September 2015
Short description: | p2@UBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBN1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -223bp_to_ENST00000262376, ENST00000545171, NM_001079514, uc002cyb.2_5end |
EntrezGene: | UBN1 |
HGNC: | 12506 |
UniProt: | Q9NPG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.32e-19 | 72 |
classical monocyte | 1.43e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-14 | 42 |
defensive cell | 2.94e-14 | 48 |
phagocyte | 2.94e-14 | 48 |
granulocyte monocyte progenitor cell | 4.29e-14 | 67 |
myeloid cell | 4.30e-14 | 108 |
common myeloid progenitor | 4.30e-14 | 108 |
myeloid lineage restricted progenitor cell | 2.55e-13 | 66 |
macrophage dendritic cell progenitor | 5.44e-13 | 61 |
monopoietic cell | 5.51e-13 | 59 |
monocyte | 5.51e-13 | 59 |
monoblast | 5.51e-13 | 59 |
promonocyte | 5.51e-13 | 59 |
leukocyte | 1.48e-12 | 136 |
endothelial cell | 2.40e-11 | 36 |
endothelial cell of vascular tree | 8.77e-11 | 24 |
hematopoietic stem cell | 1.05e-10 | 168 |
hematopoietic oligopotent progenitor cell | 8.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.03e-10 | 161 |
hematopoietic cell | 1.43e-09 | 177 |
granulocyte | 1.21e-08 | 8 |
blood vessel endothelial cell | 1.88e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 4.23e-08 | 120 |
nongranular leukocyte | 8.14e-08 | 115 |
meso-epithelial cell | 2.03e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.93e-18 | 108 |
hematopoietic system | 7.38e-17 | 98 |
blood island | 7.38e-17 | 98 |
lateral plate mesoderm | 2.99e-14 | 203 |
immune system | 6.03e-13 | 93 |
bone marrow | 3.91e-12 | 76 |
bone element | 3.04e-10 | 82 |
skeletal element | 7.76e-09 | 90 |
circulatory system | 1.69e-08 | 112 |
blood vessel endothelium | 1.88e-08 | 18 |
endothelium | 1.88e-08 | 18 |
cardiovascular system endothelium | 1.88e-08 | 18 |
blood | 1.32e-07 | 15 |
haemolymphatic fluid | 1.32e-07 | 15 |
organism substance | 1.32e-07 | 15 |
cardiovascular system | 2.31e-07 | 109 |
skeletal system | 2.82e-07 | 100 |
simple squamous epithelium | 4.01e-07 | 22 |