FFCP PHASE1:Hg19::chr16:29934566..29934579,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:29934566..29934579,- to FFCP PHASE1:Hg19::chr16:29934566..29934579,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:29934566..29934579,- | |||
|description=CAGE_peak_at_chr16:29934566..29934579,- | |||
|id=chr16:29934566..29934579,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;2.54e-09;1!CL:0002379;2.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.99e-09,1;CL:0002591,3.00e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.54e-09;1!DOID:3565;2.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.99e-09,1;DOID:3565,1.99e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.88e-14!41;UBERON:0001890!1.88e-14!41;UBERON:0006240!1.88e-14!41;UBERON:0003080!9.23e-14!42;UBERON:0001049!1.33e-13!57;UBERON:0005068!1.33e-13!57;UBERON:0006241!1.33e-13!57;UBERON:0007135!1.33e-13!57;UBERON:0002020!1.36e-12!34;UBERON:0003528!1.36e-12!34;UBERON:0001893!1.17e-11!34;UBERON:0002791!1.81e-11!33;UBERON:0001869!3.73e-11!32;UBERON:0002616!1.01e-10!59;UBERON:0001017!6.87e-10!82;UBERON:0000956!4.35e-09!25;UBERON:0000203!4.35e-09!25;UBERON:0005743!4.93e-09!86;UBERON:0007023!2.17e-08!115;UBERON:0001950!2.96e-08!20;UBERON:0002619!3.12e-08!22;UBERON:0000073!4.06e-08!94;UBERON:0001016!4.06e-08!94;UBERON:0000955!6.86e-08!69;UBERON:0006238!6.86e-08!69;UBERON:0002346!2.67e-07!90;UBERON:0003056!7.73e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;9.02e-10;1!UBERON:0003296;3.90e-09;4!UBERON:0010133;3.90e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.03e-09,1;UBERON:0003296,3.13e-09,4;UBERON:0010133,3.13e-09,4;UBERON:0002780,8.05e-09,41;UBERON:0001890,8.05e-09,41;UBERON:0003080,8.05e-09,41;UBERON:0006240,8.05e-09,41;UBERON:0001049,3.94e-08,56;UBERON:0005068,3.94e-08,56;UBERON:0006241,3.94e-08,56;UBERON:0007135,3.94e-08,56 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0.125542639594803,0.61130724598361,0.164201178899891,0.472264687882075,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0.47296445977717,0,0,0,0.376484679085209,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0,0,0,0,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,1.22031028774085,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.573673241497627,0,0,0,0.49333509683432,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.375355559615893,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,1.71697232418975,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0.224170287987055,0,0.215627574859517,0.128343036279748,0.76228387266739,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0.321707842287215,0,0.771048469013278,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.802025881213139,0.0920809889358963,0,0.910455840033585,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0.457847324091717,0,0.574265537996172,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0.330569830721956,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.59873811429845,0,0.211673582723883,0,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0.994147647766298,0.844016498463076,0,0.16480387422676,0.63337622438398,0.398495976502139,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0,0.472775363535873,1.03423011972439,0,0.347249989866585,0.885741385813839,0.964771509003264,0,0.331737779793674,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.632994193584081,0,0,0,0,0.176915129006678,0,0,0.247127877893006,0,0.134802265961354,0.802577647298789,0.702793337176017,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0.520679215005393,0,0,0.34945333648406,0,0.290268993867255,0,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0.379864775735272,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.262887354279314,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.393915911536118,0.164831716762333,0.404421263125109,0,0,0,1.22583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| ||
|short_description=p@chr16:29934566..29934579,- | |||
}} | }} |
Latest revision as of 07:58, 25 July 2015
Short description: | p@chr16:29934566..29934579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29934566..29934579, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.99e-09 | 1 |
smooth muscle cell of the pulmonary artery | 3.00e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
putamen | 1.03e-09 | 1 |
gland of diencephalon | 3.13e-09 | 4 |
neuroendocrine gland | 3.13e-09 | 4 |
regional part of forebrain | 8.05e-09 | 41 |
forebrain | 8.05e-09 | 41 |
anterior neural tube | 8.05e-09 | 41 |
future forebrain | 8.05e-09 | 41 |
neural tube | 3.94e-08 | 56 |
neural rod | 3.94e-08 | 56 |
future spinal cord | 3.94e-08 | 56 |
neural keel | 3.94e-08 | 56 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.99e-09 | 1 |
meningioma | 1.99e-09 | 1 |