FFCP PHASE1:Hg19::chr16:23690184..23690267,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:23690184..23690267,+ to FFCP PHASE1:Hg19::chr16:23690184..23690267,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5347 | |EntrezGene=5347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9077 | |HGNC=9077 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A51,B4E083,P53350 | |UniProt=Q58A51,B4E083,P53350 | ||
|association_with_transcript=0bp_to_ENST00000330792,ENST00000425844,NM_005030,uc002dlz.1_5end | |||
|cluster_id=chr16:23690184..23690267,+ | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_1_at_PLK1_5end | |||
|id=chr16:23690184..23690267,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.26e-26!679;CL:0000004!5.26e-26!679;CL:0000255!5.26e-26!679;CL:0000012!2.73e-25!682;CL:0000066!5.12e-22!254;CL:0002321!4.05e-17!248;CL:0000220!2.19e-16!246;CL:0000003!4.67e-15!722;CL:0000144!8.51e-13!625;CL:0000055!2.76e-12!180;CL:0000063!1.04e-10!578;CL:0000222!6.45e-09!119;CL:0002371!3.07e-08!591;CL:0000076!4.30e-08!62;CL:0000213!8.80e-08!57;CL:0000215!8.80e-08!57;CL:0000333!1.71e-07!41;CL:0002078!9.09e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.73e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.70e-22,253;CL:0002321,8.18e-17,250;CL:0000222,1.31e-08,121;CL:0000213,9.92e-08,58;CL:0000215,9.92e-08,58;CL:0000333,1.22e-07,41;CL:0000076,1.37e-07,63;CL:1000449,2.69e-07,15;CL:0000133,7.17e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.84e-31!235;DOID:14566!6.46e-30!239;DOID:2531!6.43e-16!51;DOID:0060083!6.43e-16!51;DOID:0050686!5.30e-15!137;DOID:0050687!4.40e-13!143;DOID:1240!2.58e-12!39;DOID:305!6.55e-11!106;DOID:8692!4.09e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.01e-10;39!DOID:2531;6.94e-10;51!DOID:0060083;6.94e-10;51!DOID:8692;5.34e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.34e-31,235;DOID:14566,1.99e-30,239;DOID:2531,4.19e-16,51;DOID:0060083,4.19e-16,51;DOID:0050686,3.09e-15,137;DOID:0050687,3.12e-13,143;DOID:1240,1.87e-12,39;DOID:305,4.95e-11,106;DOID:8692,3.26e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.73e-07;15!UBERON:0004819;2.73e-07;15!UBERON:0001285;2.73e-07;15!UBERON:0007684;2.73e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.69e-07,15;UBERON:0009773,2.69e-07,15;UBERON:0001231,2.69e-07,15;UBERON:0001285,2.69e-07,15;UBERON:0007684,2.69e-07,15;UBERON:0004208,2.69e-07,15 | |||
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| ||
|short_description=p1@PLK1 | |||
}} | }} |
Latest revision as of 06:21, 25 September 2015
Short description: | p1@PLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLK1_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000330792, ENST00000425844, NM_005030, uc002dlz.1_5end |
EntrezGene: | PLK1 |
HGNC: | 9077 |
UniProt: | Q58A51B4E083P53350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.70e-22 | 253 |
embryonic cell | 8.18e-17 | 250 |
mesodermal cell | 1.31e-08 | 121 |
lining cell | 9.92e-08 | 58 |
barrier cell | 9.92e-08 | 58 |
migratory neural crest cell | 1.22e-07 | 41 |
squamous epithelial cell | 1.37e-07 | 63 |
epithelial cell of nephron | 2.69e-07 | 15 |
neurectodermal cell | 7.17e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.69e-07 | 15 |
renal tubule | 2.69e-07 | 15 |
nephron tubule | 2.69e-07 | 15 |
nephron | 2.69e-07 | 15 |
uriniferous tubule | 2.69e-07 | 15 |
nephrogenic mesenchyme | 2.69e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.34e-31 | 235 |
disease of cellular proliferation | 1.99e-30 | 239 |
hematologic cancer | 4.19e-16 | 51 |
immune system cancer | 4.19e-16 | 51 |
organ system cancer | 3.09e-15 | 137 |
cell type cancer | 3.12e-13 | 143 |
leukemia | 1.87e-12 | 39 |
carcinoma | 4.95e-11 | 106 |
myeloid leukemia | 3.26e-09 | 31 |