FFCP PHASE1:Hg19::chr15:65067687..65067701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=348093 | |EntrezGene=348093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19098 | |HGNC=19098 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZRY4 | |UniProt=Q6ZRY4 | ||
|association_with_transcript=68bp_to_NM_194272,uc002anq.2_5end | |||
|cluster_id=chr15:65067687..65067701,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_RBPMS2_5end | |||
|id=chr15:65067687..65067701,- | |||
|ontology_enrichment_celltype=CL:0002322!4.77e-09!5;CL:0000047!9.96e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.16e-29;5!CL:0000039;2.64e-13;7!CL:0000586;2.64e-13;7!CL:0002321;1.22e-09;15!CL:0000540;1.77e-09;6!CL:0000404;1.77e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.10e-29,5;CL:0000039,2.69e-13,7;CL:0000586,2.69e-13,7;CL:0000047,9.54e-12,8;CL:0000540,1.85e-09,6;CL:0000031,1.85e-09,6;CL:0000404,1.85e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.15e-14;10!UBERON:0005564;3.15e-14;10!CL:0000031;1.77e-09;6!UBERON:0004140;8.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;8.86e-10;31!DOID:3095;6.06e-09;22!DOID:2994;6.06e-09;22!DOID:9119;4.78e-07;1!DOID:8552;8.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.24e-10,31;DOID:3095,5.97e-09,22;DOID:2994,5.97e-09,22;DOID:1240,5.26e-08,39;DOID:9119,4.78e-07,1;DOID:8552,8.49e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.17e-11;8!UBERON:0000922;9.68e-10;49!UBERON:0003135;1.68e-08;11!UBERON:0003978;5.04e-08;3!UBERON:0000946;5.04e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.19e-11,8;UBERON:0003135,1.69e-08,11;UBERON:0003978,3.90e-08,3;UBERON:0009751,3.90e-08,3;UBERON:0000946,3.90e-08,3;UBERON:0002523,3.90e-08,3;UBERON:0005983,3.90e-08,3;UBERON:0002165,3.90e-08,3;UBERON:0002062,3.90e-08,3;UBERON:0007280,3.90e-08,3 | |||
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| 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| ||
|short_description=p5@RBPMS2 | |||
}} | }} |
Latest revision as of 13:54, 18 September 2015
Short description: | p5@RBPMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBPMS2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 68bp_to_NM_194272, uc002anq.2_5end |
EntrezGene: | RBPMS2 |
HGNC: | 19098 |
UniProt: | Q6ZRY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.10e-29 | 5 |
germ line cell | 2.69e-13 | 7 |
germ cell | 2.69e-13 | 7 |
neuronal stem cell | 9.54e-12 | 8 |
neuron | 1.85e-09 | 6 |
neuroblast | 1.85e-09 | 6 |
electrically signaling cell | 1.85e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.19e-11 | 8 |
male reproductive organ | 1.69e-08 | 11 |
valve | 3.90e-08 | 3 |
cardiac mesenchyme | 3.90e-08 | 3 |
cardial valve | 3.90e-08 | 3 |
tunica intima | 3.90e-08 | 3 |
heart layer | 3.90e-08 | 3 |
endocardium | 3.90e-08 | 3 |
endocardial cushion | 3.90e-08 | 3 |
presumptive endocardium | 3.90e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.24e-10 | 31 |
germ cell and embryonal cancer | 5.97e-09 | 22 |
germ cell cancer | 5.97e-09 | 22 |
leukemia | 5.26e-08 | 39 |
acute myeloid leukemia | 4.78e-07 | 1 |
chronic myeloid leukemia | 8.49e-07 | 1 |