FFCP PHASE1:Hg19::chr15:56311515..56311555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:56311515..56311555,+ | |||
|coexpression_cluster_id=C3500 | |||
|description=CAGE_peak_at_chr15:56311515..56311555,+ | |||
|id=chr15:56311515..56311555,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.49e-30!254;CL:0002076!5.07e-15!43;CL:0000223!1.66e-13!59;CL:0002251!4.97e-13!21;CL:0000076!1.74e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.86e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.98e-17,253;CL:0000076,1.48e-09,63;CL:0000223,1.62e-07,58;CL:0002251,4.60e-07,20;CL:0002076,6.11e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.35e-10;29 | |||
|ontology_enrichment_disease=DOID:305!2.92e-45!106;DOID:0050687!1.00e-39!143;DOID:14566!5.11e-38!239;DOID:162!5.07e-37!235;DOID:299!4.48e-15!25;DOID:1749!2.51e-13!14;DOID:0050686!1.43e-08!137;DOID:7!3.40e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.90e-22;14!DOID:305;5.68e-10;106!DOID:0050687;2.52e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.27e-38,106;DOID:0050687,6.65e-29,143;DOID:14566,7.68e-28,239;DOID:162,2.47e-27,235;DOID:1749,2.19e-22,14;DOID:299,9.69e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.85e-13!9;UBERON:0004119!3.18e-12!169;UBERON:0000925!3.18e-12!169;UBERON:0006595!3.18e-12!169;UBERON:0000344!1.42e-11!12;UBERON:0001007!4.16e-11!155;UBERON:0001555!4.16e-11!155;UBERON:0007026!4.16e-11!155;UBERON:0008947!1.78e-08!38;UBERON:0003258!1.78e-08!38;UBERON:0003729!2.08e-08!5;UBERON:0000077!4.00e-08!130;UBERON:0001004!4.50e-08!72;UBERON:0001041!7.38e-08!98;UBERON:0003343!1.06e-07!4;UBERON:0004785!1.06e-07!4;UBERON:0004921!1.15e-07!129;UBERON:0004185!1.15e-07!129;UBERON:0000072!3.47e-07!46;UBERON:0000065!4.42e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.37e-15;9!UBERON:0001557;1.37e-15;9!UBERON:0003343;1.98e-13;4!UBERON:0004785;1.98e-13;4!UBERON:0000974;5.91e-09;6!UBERON:0000072;6.37e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.07e-15,9;UBERON:0003343,1.34e-13,4;UBERON:0004785,1.34e-13,4;UBERON:0001557,7.97e-09,19;UBERON:0008947,8.13e-09,38;UBERON:0003258,8.13e-09,38;UBERON:0000072,5.49e-08,47;UBERON:0001004,7.27e-07,74 | |||
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| ||
|short_description=p@chr15:56311515..56311555,+ | |||
}} | }} |
Latest revision as of 02:42, 25 July 2015
Short description: | p@chr15:56311515..56311555, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56311515..56311555, + |
Coexpression cluster: | C3500_cervical_malignant_squamous_amniotic_endometrial_ductal_epithelioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.98e-17 | 253 |
squamous epithelial cell | 1.48e-09 | 63 |
endodermal cell | 1.62e-07 | 58 |
epithelial cell of alimentary canal | 4.60e-07 | 20 |
endo-epithelial cell | 6.11e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.07e-15 | 9 |
mucosa of oral region | 1.34e-13 | 4 |
respiratory system mucosa | 1.34e-13 | 4 |
upper respiratory tract | 7.97e-09 | 19 |
respiratory primordium | 8.13e-09 | 38 |
endoderm of foregut | 8.13e-09 | 38 |
segment of respiratory tract | 5.49e-08 | 47 |
respiratory system | 7.27e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.27e-38 | 106 |
cell type cancer | 6.65e-29 | 143 |
disease of cellular proliferation | 7.68e-28 | 239 |
cancer | 2.47e-27 | 235 |
squamous cell carcinoma | 2.19e-22 | 14 |
adenocarcinoma | 9.69e-07 | 25 |