FFCP PHASE1:Hg19::chr14:75078867..75078893,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:75078867..75078893,- to FFCP PHASE1:Hg19::chr14:75078867..75078893,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557425_5end | |||
|cluster_id=chr14:75078867..75078893,- | |||
|coexpression_cluster_id=C3453 | |||
|description=CAGE_peak_4_at_LTBP2_5end | |||
|id=chr14:75078867..75078893,- | |||
|ontology_enrichment_celltype=CL:0000055!1.08e-29!180;CL:0000057!4.49e-20!75;CL:0000183!2.10e-15!59;CL:0000680!3.26e-15!57;CL:0000056!3.26e-15!57;CL:0000355!3.26e-15!57;CL:0000222!3.62e-15!119;CL:0000187!1.12e-13!54;CL:0000192!6.67e-12!42;CL:0000514!6.67e-12!42;CL:0000359!8.23e-12!32;CL:0000393!1.21e-11!60;CL:0000211!1.21e-11!60;CL:0002371!1.52e-10!591;CL:0000220!2.90e-09!246;CL:0002321!4.09e-09!248;CL:0002620!1.19e-08!23;CL:0000144!1.30e-08!625;CL:0002334!2.96e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.40e-12;32!CL:0002620;1.09e-09;23!CL:0000192;5.75e-09;43!CL:0002334;5.91e-09;12!CL:0000057;6.09e-09;73!CL:0000134;5.32e-08;55!CL:0002320;1.06e-07;188!CL:0000187;1.62e-07;55!CL:0000048;1.74e-07;58!CL:0000723;1.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.01e-23,76;CL:0000680,3.01e-15,58;CL:0000056,3.01e-15,58;CL:0000355,3.01e-15,58;CL:0000222,4.67e-15,121;CL:0000187,1.34e-13,55;CL:0000359,1.97e-12,32;CL:0000192,1.45e-11,43;CL:0000514,1.45e-11,43;CL:0000393,6.26e-11,61;CL:0000211,6.26e-11,61;CL:0002620,1.34e-09,23;CL:0002334,5.30e-09,12;CL:0002321,1.30e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.75e-09;43!CL:0000355;3.93e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.71e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.79e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.43e-22!79;UBERON:0007798!5.43e-22!79;UBERON:0004872!1.03e-21!84;UBERON:0001981!3.16e-19!60;UBERON:0007500!3.16e-19!60;UBERON:0004537!3.16e-19!60;UBERON:0006965!3.16e-19!60;UBERON:0000055!7.21e-19!69;UBERON:0000914!7.15e-18!83;UBERON:0002329!7.15e-18!83;UBERON:0003077!7.15e-18!83;UBERON:0003059!7.15e-18!83;UBERON:0007282!7.15e-18!83;UBERON:0009618!7.15e-18!83;UBERON:0007285!7.15e-18!83;UBERON:0003914!1.09e-17!118;UBERON:0001637!1.75e-17!42;UBERON:0003509!1.75e-17!42;UBERON:0004572!1.75e-17!42;UBERON:0001009!2.65e-17!113;UBERON:0000486!9.12e-17!82;UBERON:0004535!1.22e-16!110;UBERON:0004290!1.02e-15!70;UBERON:0000468!1.00e-14!659;UBERON:0001134!1.10e-14!61;UBERON:0002036!1.10e-14!61;UBERON:0003082!1.10e-14!61;UBERON:0000475!1.81e-14!365;UBERON:0002385!1.89e-14!63;UBERON:0001015!1.89e-14!63;UBERON:0000383!1.89e-14!63;UBERON:0005256!3.13e-14!143;UBERON:0000119!3.72e-14!312;UBERON:0004573!5.76e-14!33;UBERON:0004571!5.76e-14!33;UBERON:0000483!1.23e-13!309;UBERON:0000467!1.54e-12!625;UBERON:0000480!2.57e-12!626;UBERON:0002100!3.81e-12!216;UBERON:0000490!1.33e-11!138;UBERON:0000477!8.11e-11!286;UBERON:0003102!1.39e-10!95;UBERON:0004111!3.46e-10!241;UBERON:0000947!9.13e-10!21;UBERON:0010191!9.13e-10!21;UBERON:0000481!6.29e-09!347;UBERON:0007100!4.38e-08!27;UBERON:0002199!7.32e-08!45;UBERON:0002416!7.32e-08!45;UBERON:0003104!1.12e-07!238;UBERON:0009142!1.12e-07!238;UBERON:0000948!1.70e-07!24;UBERON:0005498!1.70e-07!24;UBERON:0004140!1.70e-07!24;UBERON:0009881!1.70e-07!24;UBERON:0004141!1.70e-07!24;UBERON:0003084!1.70e-07!24;UBERON:0007005!1.70e-07!24;UBERON:0004139!1.70e-07!24;UBERON:0004291!1.70e-07!24;UBERON:0000025!2.15e-07!194;UBERON:0003103!4.55e-07!69;UBERON:0000479!7.25e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.05e-14;42!UBERON:0003509;2.05e-14;42!UBERON:0004572;2.05e-14;42!UBERON:0004573;2.88e-14;33!UBERON:0004571;2.88e-14;33!UBERON:0007500;8.52e-11;56!UBERON:0001981;8.52e-11;56!UBERON:0004537;8.52e-11;56!UBERON:0000947;1.06e-10;21!UBERON:0010191;1.06e-10;21!UBERON:0000055;1.64e-09;65!UBERON:0002049;3.00e-09;75!UBERON:0007798;3.00e-09;75!UBERON:0003914;7.44e-09;74!UBERON:0007100;5.38e-08;25!UBERON:0002384;2.35e-07;198!UBERON:0000948;2.56e-07;22 | |||
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| ||
|short_description=p4@LTBP2 | |||
}} | }} |
Latest revision as of 01:17, 16 September 2015
Short description: | p4@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBP2_5end |
Coexpression cluster: | C3453_Fibroblast_Smooth_Preadipocyte_aorta_Chondrocyte_spindle_mesenchymal |
Association with transcript: | 0bp_to_ENST00000557425_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.01e-23 | 76 |
muscle precursor cell | 3.01e-15 | 58 |
myoblast | 3.01e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-15 | 58 |
mesodermal cell | 4.67e-15 | 121 |
muscle cell | 1.34e-13 | 55 |
vascular associated smooth muscle cell | 1.97e-12 | 32 |
smooth muscle cell | 1.45e-11 | 43 |
smooth muscle myoblast | 1.45e-11 | 43 |
electrically responsive cell | 6.26e-11 | 61 |
electrically active cell | 6.26e-11 | 61 |
skin fibroblast | 1.34e-09 | 23 |
preadipocyte | 5.30e-09 | 12 |
embryonic cell | 1.30e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.79e-08 | 14 |