FFCP PHASE1:Hg19::chr14:68086586..68086595,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:68086586..68086595,+ to FFCP PHASE1:Hg19::chr14:68086586..68086595,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=384 | |EntrezGene=384 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=664 | |HGNC=664 | ||
|TSSclassifier=strong | |||
|UniProt=P78540 | |UniProt=P78540 | ||
|association_with_transcript=7bp_to_NM_001172,uc001xjs.2_5end | |||
|cluster_id=chr14:68086586..68086595,+ | |||
|description=CAGE_peak_2_at_ARG2_5end | |||
|id=chr14:68086586..68086595,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.49e-13!24;CL:0000071!2.86e-11!18;CL:0002546!2.86e-11!18;CL:0000115!1.28e-10!35;CL:0002078!2.64e-09!44;CL:0002321!1.36e-07!248;CL:0000066!1.44e-07!254;CL:0000220!2.74e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.77e-17;24!CL:0000071;1.32e-14;18!CL:0000115;1.04e-12;36!CL:0002078;1.22e-08;45!CL:0002543;1.31e-07;6!CL:1000449;3.31e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.04e-17,24;CL:0000115,4.87e-15,36;CL:0000071,8.20e-15,18;CL:0002546,8.20e-15,18;CL:0002078,2.78e-13,45;CL:0002321,8.38e-10,250;CL:0000066,2.57e-08,253;CL:0002543,1.44e-07,6;CL:0000133,3.04e-07,59;CL:0000221,3.17e-07,72;CL:1000449,3.76e-07,15;CL:1000413,8.00e-07,9;CL:0000213,9.53e-07,58;CL:0000215,9.53e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.32e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.17e-15!194;UBERON:0000483!3.75e-14!309;UBERON:0000119!7.59e-14!312;UBERON:0004111!2.15e-13!241;UBERON:0000477!6.88e-12!286;UBERON:0001986!2.86e-11!18;UBERON:0004638!2.86e-11!18;UBERON:0004852!2.86e-11!18;UBERON:0000487!1.10e-09!22;UBERON:0003914!7.09e-09!118;UBERON:0006914!1.95e-07!25;UBERON:0000055!4.73e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.32e-14;18!UBERON:0001986;1.32e-14;18!UBERON:0004852;1.32e-14;18!UBERON:0000487;1.25e-13;22!UBERON:0000490;4.04e-11;33!UBERON:0006914;4.58e-11;25!UBERON:0006555;3.31e-07;15!UBERON:0004819;3.31e-07;15!UBERON:0001285;3.31e-07;15!UBERON:0007684;3.31e-07;15!UBERON:0002113;7.61e-07;24!UBERON:0011143;7.61e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.20e-15,18;UBERON:0001986,8.20e-15,18;UBERON:0004852,8.20e-15,18;UBERON:0000487,6.04e-14,22;UBERON:0000025,1.63e-13,192;UBERON:0004111,1.74e-12,240;UBERON:0000483,1.35e-11,306;UBERON:0006914,2.45e-11,25;UBERON:0000119,3.76e-11,309;UBERON:0003914,1.77e-09,117;UBERON:0004211,3.76e-07,15;UBERON:0009773,3.76e-07,15;UBERON:0001231,3.76e-07,15;UBERON:0001285,3.76e-07,15;UBERON:0007684,3.76e-07,15;UBERON:0004208,3.76e-07,15;UBERON:0000055,6.81e-07,68;UBERON:0003915,8.00e-07,9;UBERON:0004700,8.00e-07,9;UBERON:0001917,8.00e-07,9 | |||
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| ||
|short_description=p2@ARG2 | |||
}} | }} |
Latest revision as of 05:06, 25 September 2015
Short description: | p2@ARG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_001172, uc001xjs.2_5end |
EntrezGene: | ARG2 |
HGNC: | 664 |
UniProt: | P78540 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.04e-17 | 24 |
endothelial cell | 4.87e-15 | 36 |
blood vessel endothelial cell | 8.20e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.20e-15 | 18 |
meso-epithelial cell | 2.78e-13 | 45 |
embryonic cell | 8.38e-10 | 250 |
epithelial cell | 2.57e-08 | 253 |
vein endothelial cell | 1.44e-07 | 6 |
neurectodermal cell | 3.04e-07 | 59 |
ectodermal cell | 3.17e-07 | 72 |
epithelial cell of nephron | 3.76e-07 | 15 |
endothelial cell of artery | 8.00e-07 | 9 |
lining cell | 9.53e-07 | 58 |
barrier cell | 9.53e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.20e-15 | 18 |
endothelium | 8.20e-15 | 18 |
cardiovascular system endothelium | 8.20e-15 | 18 |
simple squamous epithelium | 6.04e-14 | 22 |
tube | 1.63e-13 | 192 |
anatomical conduit | 1.74e-12 | 240 |
epithelium | 1.35e-11 | 306 |
squamous epithelium | 2.45e-11 | 25 |
cell layer | 3.76e-11 | 309 |
epithelial tube | 1.77e-09 | 117 |
nephron epithelium | 3.76e-07 | 15 |
renal tubule | 3.76e-07 | 15 |
nephron tubule | 3.76e-07 | 15 |
nephron | 3.76e-07 | 15 |
uriniferous tubule | 3.76e-07 | 15 |
nephrogenic mesenchyme | 3.76e-07 | 15 |
vessel | 6.81e-07 | 68 |
endothelial tube | 8.00e-07 | 9 |
arterial system endothelium | 8.00e-07 | 9 |
endothelium of artery | 8.00e-07 | 9 |