FFCP PHASE1:Hg19::chr14:35872494..35872511,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:35872494..35872511,- to FFCP PHASE1:Hg19::chr14:35872494..35872511,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4792 | |EntrezGene=4792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7797 | |HGNC=7797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_ENST00000555371_5end | |||
|cluster_id=chr14:35872494..35872511,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_NFKBIA_5end | |||
|id=chr14:35872494..35872511,- | |||
|ontology_enrichment_celltype=CL:0000738!3.86e-29!140;CL:0000766!5.32e-27!76;CL:0002057!3.90e-25!42;CL:0000860!1.28e-24!45;CL:0000557!2.22e-22!71;CL:0002009!5.39e-22!65;CL:0002087!7.61e-22!119;CL:0002031!1.90e-21!124;CL:0002194!8.01e-21!63;CL:0000576!8.01e-21!63;CL:0000040!8.01e-21!63;CL:0000559!8.01e-21!63;CL:0000839!2.28e-20!70;CL:0000037!2.96e-17!172;CL:0000566!2.96e-17!172;CL:0000988!1.19e-16!182;CL:0002032!2.83e-16!165;CL:0000837!2.83e-16!165;CL:0000763!9.18e-14!112;CL:0000049!9.18e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-39;33!CL:0002057;1.72e-39;33!CL:0000473;1.46e-31;39!CL:0000234;1.46e-31;39!CL:0000576;9.56e-29;48!CL:0000766;1.60e-24;69!CL:0002087;5.11e-14;104!CL:0000094;8.51e-12;8!CL:0000738;2.61e-11;136!CL:0000763;1.92e-10;100!CL:0000081;4.48e-10;11!CL:0002393;5.80e-09;6!CL:0002397;5.80e-09;6!CL:0000988;4.64e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.93e-53,136;CL:0000766,1.11e-51,72;CL:0000860,2.94e-51,42;CL:0002057,2.94e-51,42;CL:0000473,6.55e-50,48;CL:0000234,6.55e-50,48;CL:0000557,4.24e-43,67;CL:0002009,2.94e-42,61;CL:0002031,7.49e-40,120;CL:0002194,7.78e-40,59;CL:0000576,7.78e-40,59;CL:0000040,7.78e-40,59;CL:0000559,7.78e-40,59;CL:0000839,8.07e-40,66;CL:0002087,3.95e-39,115;CL:0000988,4.92e-38,177;CL:0000037,7.28e-38,168;CL:0002032,1.59e-35,161;CL:0000837,1.59e-35,161;CL:0000763,4.12e-33,108;CL:0000049,4.12e-33,108;CL:0000134,1.36e-13,354;CL:0002320,3.09e-13,361;CL:0000094,8.72e-12,8;CL:0000048,2.39e-10,427;CL:0000034,4.39e-10,441;CL:0000081,4.75e-10,11;CL:0000219,4.87e-10,386;CL:0000723,8.15e-10,433;CL:0002393,3.75e-09,9;CL:0002397,3.75e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-36;42!CL:0000049;2.01e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.74e-22!112;UBERON:0002390!7.58e-22!102;UBERON:0003061!7.58e-22!102;UBERON:0002371!3.20e-20!80;UBERON:0002405!1.70e-16!115;UBERON:0001474!2.01e-16!86;UBERON:0004765!3.94e-14!101;UBERON:0001434!3.94e-14!101;UBERON:0003081!5.53e-09!216;UBERON:0002204!1.07e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.79e-39,76;UBERON:0002390,4.12e-38,98;UBERON:0003061,4.12e-38,98;UBERON:0002193,3.05e-35,108;UBERON:0001474,1.38e-34,82;UBERON:0002405,2.87e-32,93;UBERON:0004765,5.06e-31,90;UBERON:0001434,3.16e-27,100;UBERON:0003081,1.73e-19,203;UBERON:0002204,1.81e-14,167;UBERON:0002384,3.91e-12,371;UBERON:0000926,2.69e-08,315;UBERON:0004120,2.69e-08,315;UBERON:0006603,2.69e-08,315 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.422863212287913,0,0.446961094427288,2.61701557230111,0,0.631719873426831,0,0,2.09340350391728,0.655324116390517,0.527533956456907,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,1.95173119516203,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,1.98674854944673,0.985207073399349,0.708397031823113,7.47392126012918,4.22212337906934,5.57338043937874,0.919421224478927,0.6024118375565,0.369754010166788,0,0.284338464974843,0.880801318004542,12.1878989877013,42.3148784161999,28.4284240637766,1.11957737119962,0,0.515151135268373,5.23433659606433,2.26725566213286,1.94067248950253,18.5943229524548,12.7462045286766,9.60089749774821,26.1800077013157,17.931249457037,27.6684208969645,51.3671064297562,46.4748972180355,16.251178391321,17.130052898377,12.8265890527188,17.5284317867166,70.0932113529367,41.7207735198922,72.2450952152917,4.28806690242731,3.98927315243264,5.11469700639233,62.104777066517,28.369261234557,51.0714244176371,9.79869794501299,9.38669253156363,14.3344637505377,42.3779651843358,51.1905914022715,55.3809178021548,5.49263744411049,10.2050063983221,2.30624510059213,3.36985893439485,4.20495299956218,3.85741408072992,0,2.78483348078726,1.27864907635244,0,0.546138611262131,0,2.13365111283254,0,1.14950487990897,0.661044872784862,0,5.69212969109448,4.69789751496751,6.88091810625412,5.28685314316103,3.36305137788922,0.263384084775077,1.57367816091066,12.9693551707224,4.11202997999018,0.334372990781356,0.977766799900771,0.473447805734733,0,0.445641827540694,0,0.664601683750863,0.270803863765016,0.768547918354051,1.04047478047903,0.493313713811028,0,0.289803085735052,0.296573126324121,0.535081656179426,0,0.226618685395132,1.91610246800961,0.68725489096526,0.506039384039006,0,0,0,0.903450714466637,0.895906278080929,0,1.18388626022008,0,3.62892137804518,12.3022490060413,4.92402973201517,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0.973269740605272,0.567208902984407,0,0,0.458426764241994,0,0.370784442784429,0.649094787309367,0.348259474598534,0.664789802594326,1.43094374583205,3.43196946468077,0,0.39752481473341,0,0,0,0,0.825354125820202,0,0.258416759169329,0.35576626268671,0.66944122552934,1.20848795132744,0,0,0,0.81014194788176,0.446498641420399,0,0.112611480483322,0,0,0,26.3560834872127,27.1446184903828,0.872188104285069,0,0.379891534993739,0.264818361626438,0,0.709336764396714,0,0,0,0.622422070799533,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0.587172493218824,0.161872944368132,0.561803226808994,0,0.368502951935304,0.413303124703062,0,1.7308685049499,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.705264687593482,0.169560592310488,0.773043412653187,0.818238361772504,0.286804595389004,0,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0.591534000199219,0.337169380156203,0,0.55146986366197,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,1.15424147083917,0,0,0,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,0,0.219500570817251,0,0.201057944823262,0.555530670951178,0.325808305310325,1.03993478527958,0,0,0.234817388471643,1.44366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0.936017060556951,0.148631162288728,0.93733833986777,0.839910640994298,0,0,0.871901815541886,0.383382679165211,0.492663237895943,0.176096868026452,13.0616712790686,11.8178361801908,10.7306068412423,0.190493682876507,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.22001485746285,0.517086863031111,3.57656445851882,0,0.531876233169741,0,0,1.41849132023278,0,0.57191197463259,1.08524321078289,0,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,6.08118903205952,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,2.75843064282698,11.6438890424139,5.64709359630893,0,1.30139853857622,0.773288812777695,0.167516265334349,0,26.2152458381514,29.9161459204025,17.8198670777495,0.49076596687656,1.00034104211935,0.271265023699736,0.415941723061614,0.713715955188647,0.315404830067869,0.234282829985426,0,0,0,0,0.368738337083406,0.260650843404249,0.195801157462741,0.343143423810856,1.6541442089831,19.4142780736755,9.07184241329277,1.21251028578504,0,0.604780586659361,0,0,0.561320188866147,0.256278298511402,0,0,0,0.616838775210622,0.355123450626254,0.0821271560138091,0.519254429183621,0.581051892299796,0.241718899183244,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.633309773357254,1.13733384070897,0.680374821106063,0.431831832204279,0,0,0,0,1.66215201785745,0,0,0,0,0,0.32537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| ||
|short_description=p5@NFKBIA | |||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p5@NFKBIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NFKBIA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -50bp_to_ENST00000555371_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.79e-39 | 76 |
hematopoietic system | 4.12e-38 | 98 |
blood island | 4.12e-38 | 98 |
hemolymphoid system | 3.05e-35 | 108 |
bone element | 1.38e-34 | 82 |
immune system | 2.87e-32 | 93 |
skeletal element | 5.06e-31 | 90 |
skeletal system | 3.16e-27 | 100 |
lateral plate mesoderm | 1.73e-19 | 203 |
musculoskeletal system | 1.81e-14 | 167 |
connective tissue | 3.91e-12 | 371 |
mesoderm | 2.69e-08 | 315 |
mesoderm-derived structure | 2.69e-08 | 315 |
presumptive mesoderm | 2.69e-08 | 315 |